RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 IGSF8Q969P0 613 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 NT5C3BQ969T7 300 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 ALG14Q96F25 216 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 NPY6RQ99463 290 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 ORAI3Q9BRQ5 295 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 NUP58Q9BVL2 599 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 GTPBP2Q9BX10 602 aaKnown RBP11.41□□□□□ -0.58
SSBP3-206ENST00000420121 GANQ9H2C0 597 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 C6orf106Q9H6K1 298 aaPredicted RBP11.41□□□□□ -0.58
SSBP3-206ENST00000420121 FAM204AQ9H8W3 233 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 FBRSQ9HAH7 460 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 DDIT4Q9NX09 232 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 DACH1Q9UI36 760 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 SLCO3A1Q9UIG8 710 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 ERVW-1Q9UQF0 538 aa11.41□□□□□ -0.58
SSBP3-206ENST00000420121 WDFY3Q8IZQ1 3526 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 IGF2RP11717 2491 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 A0A1B0GTW7 788 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 TYW5A2RUC4 315 aaKnown RBP11.4□□□□□ -0.58
SSBP3-206ENST00000420121 TTC34A8MYJ7 566 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 F5H5T6 163 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 TOP3BO95985 862 aaKnown RBP11.4□□□□□ -0.58
SSBP3-206ENST00000420121 ACADMP11310 421 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 UCHL3P15374 230 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 EEF1GP26641 437 aaKnown RBP11.4□□□□□ -0.58
SSBP3-206ENST00000420121 MZF1P28698 734 aaPredicted RBP11.4□□□□□ -0.58
SSBP3-206ENST00000420121 CCR1P32246 355 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 NOS2P35228 1153 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 KRT9P35527 623 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 GGCXP38435 758 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 KLK7P49862 253 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 PLK1P53350 603 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 FAM193AP78312 1265 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 CENPCQ03188 943 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 ZBTB16Q05516 673 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 GRIK2Q13002 908 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 CDH18Q13634 790 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 RAPGEF1Q13905 1077 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 C5orf22Q49AR2 442 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 SYCP2LQ5T4T6 812 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 C9orf64Q5T6V5 341 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 TRNP1Q6NT89 227 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 BNIPLQ7Z465 357 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 C14orf80Q86SX3 495 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 NOP9Q86U38 636 aaKnown RBP11.4□□□□□ -0.58
SSBP3-206ENST00000420121 ZNF683Q8IZ20 524 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 CCAR2Q8N163 923 aaKnown RBP11.4□□□□□ -0.58
SSBP3-206ENST00000420121 ZCCHC9Q8N567 271 aaKnown RBP11.4□□□□□ -0.58
SSBP3-206ENST00000420121 EPS8L1Q8TE68 723 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 PCED1AQ9H1Q7 454 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 PIGVQ9NUD9 493 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 TAB2Q9NYJ8 693 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 KIAA1522Q9P206 1035 aaPredicted RBP11.4□□□□□ -0.58
SSBP3-206ENST00000420121 SERGEFQ9UGK8 458 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 SUSD2Q9UGT4 822 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 SUN2Q9UH99 717 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 EIF2B4Q9UI10 523 aaKnown RBP11.4□□□□□ -0.58
SSBP3-206ENST00000420121 ANGPTL2Q9UKU9 493 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.4□□□□□ -0.58
SSBP3-206ENST00000420121 HS3ST4Q9Y661 456 aa11.4□□□□□ -0.58
SSBP3-206ENST00000420121 SYNJ2BP-COX16A0A087WUM0 186 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 A0A1B0GVM2 712 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 FAM170AA1A519 330 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 TCAF2A6NFQ2 919 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 MEI4A8MW99 385 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 F8VZ95 297 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 H0Y626 953 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 EPHB6O15197 1021 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 OPHN1O60890 802 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 PAGE1O75459 146 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 SRPRAP08240 638 aaKnown RBP11.39□□□□□ -0.59
SSBP3-206ENST00000420121 SLC2A3P11169 496 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 ANP32AP39687 249 aaKnown RBP11.39□□□□□ -0.59
SSBP3-206ENST00000420121 MATKP42679 507 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 NUMBP49757 651 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 STK19P49842 368 aaPredicted RBP11.39□□□□□ -0.59
SSBP3-206ENST00000420121 BPIFB4P59827 614 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 AUHQ13825 339 aaKnown RBP11.39□□□□□ -0.59
SSBP3-206ENST00000420121 KRT31Q15323 416 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 C2CD6Q53TS8 623 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 ZNF776Q68DI1 518 aaPredicted RBP11.39□□□□□ -0.59
SSBP3-206ENST00000420121 XYLT1Q86Y38 959 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 ZDHHC17Q8IUH5 632 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 DHX40Q8IX18 779 aaKnown RBP11.39□□□□□ -0.59
SSBP3-206ENST00000420121 PTPRN2Q92932 1015 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 MS4A3Q96HJ5 214 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 RPL10LQ96L21 214 aaKnown RBP11.39□□□□□ -0.59
SSBP3-206ENST00000420121 NOX5Q96PH1 765 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 FAM129BQ96TA1 746 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 TMEM121BQ9BXQ6 578 aaPredicted RBP11.39□□□□□ -0.59
SSBP3-206ENST00000420121 STK33Q9BYT3 514 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 PABPC3Q9H361 631 aaKnown RBP11.39□□□□□ -0.59
SSBP3-206ENST00000420121 WDR70Q9NW82 654 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 ARHGEF38Q9NXL2 777 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 COX16Q9P0S2 106 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 NOCTQ9UK39 431 aaKnown RBP11.39□□□□□ -0.59
SSBP3-206ENST00000420121 OR51B4Q9Y5P0 310 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 PTPRBP23467 1997 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 ZZEF1O43149 2961 aa11.39□□□□□ -0.59
SSBP3-206ENST00000420121 TARSL2A2RTX5 802 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms