RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 ERP27Q96DN0 273 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 TAS2R13Q9NYV9 303 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 ZNF510Q9Y2H8 683 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 DERAQ9Y315 318 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 SKAP2O75563 359 aaPredicted RBP8.62□□□□□ -1.03
UBR4-206ENST00000419533 GRK2P25098 689 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 GUCA1AP43080 201 aaPredicted RBP8.62□□□□□ -1.03
UBR4-206ENST00000419533 SARSP49591 514 aaKnown RBP8.62□□□□□ -1.03
UBR4-206ENST00000419533 CST9Q5W186 159 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 SLC51AQ86UW1 340 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 ARID3BQ8IVW6 561 aaPredicted RBP8.62□□□□□ -1.03
UBR4-206ENST00000419533 SYTL1Q8IYJ3 562 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 STK40Q8N2I9 435 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 TMEM161BQ8NDZ6 487 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 EME1Q96AY2 570 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 FUT8Q9BYC5 575 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 ZCWPW1Q9H0M4 648 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 SOX13Q9UN79 622 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 RWDD3Q9Y3V2 267 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 CAPN6Q9Y6Q1 641 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 B2RBV5 119 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 H3BMM5 538 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 MMP3P08254 477 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 TNNI3P19429 210 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 CRABP2P29373 138 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 GLRBP48167 497 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 RFX3P48380 749 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 TJAP1Q5JTD0 557 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 PAPD7Q5XG87 772 aaKnown RBP8.62□□□□□ -1.03
UBR4-206ENST00000419533 LLGL2Q6P1M3 1020 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 REXO1L1PQ8IX06 675 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 B3GALNT2Q8NCR0 500 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 NSL1Q96IY1 281 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 ARMC7Q9H6L4 198 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 NMRAL1Q9HBL8 299 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 DNPEPQ9ULA0 475 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 PCDHA3Q9Y5H8 950 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 GLUD1P00367 558 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 ASGR1P07306 291 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 CDC25CP30307 473 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 COPAP53621 1224 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 MAD2L1Q13257 205 aaPredicted RBP8.62□□□□□ -1.03
UBR4-206ENST00000419533 CYP51A1Q16850 503 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 PGS1Q32NB8 556 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 CYP4Z1Q86W10 505 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 KCNMB4Q86W47 210 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 TOP6BLQ8N6T0 577 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 HJURPQ8NCD3 748 aaPredicted RBP8.62□□□□□ -1.03
UBR4-206ENST00000419533 KCNV2Q8TDN2 545 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 DIS3LQ8TF46 1054 aaKnown RBP8.62□□□□□ -1.03
UBR4-206ENST00000419533 MYLPFQ96A32 169 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 MED8Q96G25 268 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 OLFM3Q96PB7 478 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 SH3GL1Q99961 368 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 THTPAQ9BU02 230 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 MIEF1Q9NQG6 463 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 SPEF2Q9C093 1822 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 RGPD3A6NKT7 1758 aaPredicted RBP8.62□□□□□ -1.03
UBR4-206ENST00000419533 RGPD4Q7Z3J3 1758 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 A0A088AWK7 358 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 TMEM114B3SHH9 223 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 RNF103O00237 685 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 DGKIO75912 1065 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 CXCL14O95715 111 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 ZNF10P21506 573 aaPredicted RBP8.62□□□□□ -1.03
UBR4-206ENST00000419533 MIPP30301 263 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 TMED1Q13445 227 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 NAB1Q13506 487 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 SEL1L3Q68CR1 1132 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 LAYNQ6UX15 382 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 NOA1Q8NC60 698 aaKnown RBP8.62□□□□□ -1.03
UBR4-206ENST00000419533 LPPQ93052 612 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 FAM136AQ96C01 138 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 OSBPL1AQ9BXW6 950 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 OXCT2Q9BYC2 517 aaPredicted RBP8.62□□□□□ -1.03
UBR4-206ENST00000419533 CCDC134Q9H6E4 229 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 RGS18Q9NS28 235 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 FAM105AQ9NUU6 356 aa8.62□□□□□ -1.03
UBR4-206ENST00000419533 TDRKHQ9Y2W6 561 aaKnown RBP8.62□□□□□ -1.03
UBR4-206ENST00000419533 IGKV6D-41A0A0C4DH26 115 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 UBXN8O00124 270 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 ZNF862O60290 1169 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 CCNT2O60583 730 aaKnown RBP8.61□□□□□ -1.03
UBR4-206ENST00000419533 TRUB2O95900 331 aaKnown RBP8.61□□□□□ -1.03
UBR4-206ENST00000419533 PDHA1P08559 390 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 THRAP10827 490 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 BOP1Q14137 746 aaKnown RBP8.61□□□□□ -1.03
UBR4-206ENST00000419533 KHDRBS2Q5VWX1 349 aaKnown RBP8.61□□□□□ -1.03
UBR4-206ENST00000419533 LRRC49Q8IUZ0 686 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 MAGEB10Q96LZ2 347 aaPredicted RBP8.61□□□□□ -1.03
UBR4-206ENST00000419533 PURBQ96QR8 312 aaKnown RBP8.61□□□□□ -1.03
UBR4-206ENST00000419533 CPNE1Q99829 537 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 DNAJC18Q9H819 358 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 SLC28A3Q9HAS3 691 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 CYP4F12Q9HCS2 524 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 POLG2Q9UHN1 485 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 PADI4Q9UM07 663 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 ANKRD6Q9Y2G4 727 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 SEC24DO94855 1032 aaPredicted RBP8.61□□□□□ -1.03
UBR4-206ENST00000419533 CPA3P15088 417 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms