RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 COX16Q9P0S2 106 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 GMIPQ9P107 970 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 WDR35Q9P2L0 1181 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 A0A1W2PQH9 124 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 RTN3O95197 1032 aaPredicted RBP13.26□□□□□ -0.29
LINC00642-201ENST00000419459 NCAM1P13591 858 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 PDGFRAP16234 1089 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 HMGA1P17096 107 aaKnown RBP13.26□□□□□ -0.29
LINC00642-201ENST00000419459 YWHAQP27348 245 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 CDC25CP30307 473 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 ATXN1P54253 815 aaKnown RBP13.26□□□□□ -0.29
LINC00642-201ENST00000419459 YWHAZP63104 245 aaKnown RBP13.26□□□□□ -0.29
LINC00642-201ENST00000419459 UBAP2Q5T6F2 1119 aaKnown RBP13.26□□□□□ -0.29
LINC00642-201ENST00000419459 THEMIS2Q5TEJ8 643 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 BSPRYQ5W0U4 402 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 PM20D1Q6GTS8 502 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 SCD5Q86SK9 330 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 CCDC25Q86WR0 208 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 DEFB106AQ8N104 65 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 C12orf76Q8N812 135 aaPredicted RBP13.26□□□□□ -0.29
LINC00642-201ENST00000419459 BBOF1Q8ND07 529 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 FAM13CQ8NE31 585 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 RXFP2Q8WXD0 754 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 KRT35Q92764 455 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 MRPL38Q96DV4 380 aaKnown RBP13.26□□□□□ -0.29
LINC00642-201ENST00000419459 SPATA17Q96L03 361 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 TRAPPC9Q96Q05 1148 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 NUDCD1Q96RS6 583 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 FOXP3Q9BZS1 431 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 MYLK2Q9H1R3 596 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 STOML1Q9UBI4 398 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 CDH22Q9UJ99 828 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 TRIM33Q9UPN9 1127 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 USTQ9Y2C2 406 aa13.26□□□□□ -0.29
LINC00642-201ENST00000419459 FAM47DPA6NHR8 397 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 C2CD4BA6NLJ0 364 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 LINC01565O15544 149 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 ACSL3O95573 720 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 LRG1P02750 347 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 LTFP02788 710 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 ABHD2P08910 425 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 RPS6KA3P51812 740 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 SNX16P57768 344 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 ZRSR2Q15696 482 aaKnown RBP13.25□□□□□ -0.29
LINC00642-201ENST00000419459 TAF12Q16514 161 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 SLC5A9Q2M3M2 681 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 TRIM68Q6AZZ1 485 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 DNAJB7Q7Z6W7 309 aaPredicted RBP13.25□□□□□ -0.29
LINC00642-201ENST00000419459 ZDHHC17Q8IUH5 632 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 ZDHHC14Q8IZN3 488 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 ZNF398Q8TD17 642 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 DNAJC9Q8WXX5 260 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 DDX23Q9BUQ8 820 aaKnown RBP13.25□□□□□ -0.29
LINC00642-201ENST00000419459 APOL5Q9BWW9 433 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 POPDC2Q9HBU9 364 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 ZNF334Q9HCZ1 680 aaPredicted RBP13.25□□□□□ -0.29
LINC00642-201ENST00000419459 SAR1AQ9NR31 198 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 NKX1-2Q9UD57 310 aaPredicted RBP13.25□□□□□ -0.29
LINC00642-201ENST00000419459 LNPEPQ9UIQ6 1025 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 LRCH1Q9Y2L9 728 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 NOTCH4Q99466 2003 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 DENND4CQ5VZ89 1909 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 CAPN9O14815 690 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 TBX18O95935 607 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 COMTP21964 271 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 PSMA2P25787 234 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 YWHAGP61981 247 aaKnown RBP eCLIP13.25□□□□□ -0.29
LINC00642-201ENST00000419459 PTK6Q13882 451 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 MPP2Q14168 576 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 TCEAL5Q5H9L2 206 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 PPM1LQ5SGD2 360 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 HS6ST3Q8IZP7 471 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 GDAP1Q8TB36 358 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 KCNV2Q8TDN2 545 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 TEKT4Q8WW24 435 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 PSMG2Q969U7 264 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 ERP27Q96DN0 273 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 ZNF512Q96ME7 567 aaPredicted RBP13.25□□□□□ -0.29
LINC00642-201ENST00000419459 FBXO44Q9H4M3 255 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.25□□□□□ -0.29
LINC00642-201ENST00000419459 SENP1Q9P0U3 644 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 HSFX1Q9UBD0 423 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 SCML2Q9UQR0 700 aa13.25□□□□□ -0.29
LINC00642-201ENST00000419459 MDM4O15151 490 aa13.24□□□□□ -0.29
LINC00642-201ENST00000419459 TP73O15350 636 aa13.24□□□□□ -0.29
LINC00642-201ENST00000419459 FBXO21O94952 628 aa13.24□□□□□ -0.29
LINC00642-201ENST00000419459 GAS8O95995 478 aa13.24□□□□□ -0.29
LINC00642-201ENST00000419459 PYGMP11217 842 aa13.24□□□□□ -0.29
LINC00642-201ENST00000419459 CREB1P16220 341 aa13.24□□□□□ -0.29
LINC00642-201ENST00000419459 GJA1P17302 382 aa13.24□□□□□ -0.29
LINC00642-201ENST00000419459 GJC1P36383 396 aa13.24□□□□□ -0.29
LINC00642-201ENST00000419459 SSR1P43307 286 aaKnown RBP13.24□□□□□ -0.29
LINC00642-201ENST00000419459 MARCKSL1P49006 195 aa13.24□□□□□ -0.29
LINC00642-201ENST00000419459 EPHB3P54753 998 aa13.24□□□□□ -0.29
LINC00642-201ENST00000419459 ADGRE1Q14246 886 aa13.24□□□□□ -0.29
LINC00642-201ENST00000419459 VEPH1Q14D04 833 aa13.24□□□□□ -0.29
LINC00642-201ENST00000419459 DUSP6Q16828 381 aa13.24□□□□□ -0.29
LINC00642-201ENST00000419459 CCDC14Q49A88 953 aa13.24□□□□□ -0.29
LINC00642-201ENST00000419459 EFHC1Q5JVL4 640 aa13.24□□□□□ -0.29
LINC00642-201ENST00000419459 PRPF38BQ5VTL8 546 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms