RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 H3BNC9 293 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 RNF103O00237 685 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 GRM6O15303 877 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 CCL16O15467 120 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 COCHO43405 550 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 ATP8B1O43520 1251 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 MAP3K6O95382 1288 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 GOLGA6DP0CG33 693 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 MYL4P12829 197 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 MYOGP15173 224 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 RHOQP17081 205 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 ERCC2P18074 760 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 AMPD1P23109 780 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 ECHS1P30084 290 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 CORO1AP31146 461 aaKnown RBP6.13□□□□□ -1.43
HMGB3-202ENST00000419110 MAPKAPK2P49137 400 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 CLCN4P51793 760 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 ITGA8P53708 1063 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 PLTPP55058 493 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 ERVFC1P60507 584 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 ZNF33AQ06730 810 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 PPIDQ08752 370 aaKnown RBP6.13□□□□□ -1.43
HMGB3-202ENST00000419110 GALNT2Q10471 571 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 AP1B1Q10567 949 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 CASP8Q14790 479 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 SLMAPQ14BN4 828 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 SHHQ15465 462 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 TRIP13Q15645 432 aaPredicted RBP6.13□□□□□ -1.43
HMGB3-202ENST00000419110 ANO4Q32M45 955 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 HSP90B2PQ58FF3 399 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 MS4A13Q5J8X5 152 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 BEND6Q5SZJ8 279 aaPredicted RBP6.13□□□□□ -1.43
HMGB3-202ENST00000419110 CFAP58Q5T655 872 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 PIK3R6Q5UE93 754 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 RAP1GAP2Q684P5 730 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 ITPRIPL1Q6GPH6 555 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 TIGD7Q6NT04 549 aaPredicted RBP6.13□□□□□ -1.43
HMGB3-202ENST00000419110 CCNI2Q6ZMN8 369 aaPredicted RBP6.13□□□□□ -1.43
HMGB3-202ENST00000419110 TMC3Q7Z5M5 1100 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 DNAJB7Q7Z6W7 309 aaPredicted RBP6.13□□□□□ -1.43
HMGB3-202ENST00000419110 METTL3Q86U44 580 aaKnown RBP6.13□□□□□ -1.43
HMGB3-202ENST00000419110 CCDC25Q86WR0 208 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 TMC8Q8IU68 726 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 PPIL6Q8IXY8 311 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 TNS4Q8IZW8 715 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 MREGQ8N565 214 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 MRPL43Q8N983 215 aaKnown RBP6.13□□□□□ -1.43
HMGB3-202ENST00000419110 FAM71DQ8N9W8 422 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 HJURPQ8NCD3 748 aaPredicted RBP6.13□□□□□ -1.43
HMGB3-202ENST00000419110 SPPL3Q8TCT6 385 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 GDPD5Q8WTR4 605 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 HTR3CQ8WXA8 447 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 SPATA13Q96N96 652 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 RPRD1AQ96P16 312 aaPredicted RBP6.13□□□□□ -1.43
HMGB3-202ENST00000419110 PPP1R2P1Q96PQ5 205 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 NKX2-4Q9H2Z4 354 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 SFXN1Q9H9B4 322 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 VIPAS39Q9H9C1 493 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 SP110Q9HB58 689 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 ZNF334Q9HCZ1 680 aaPredicted RBP6.13□□□□□ -1.43
HMGB3-202ENST00000419110 ZDHHC7Q9NXF8 308 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 GOLGA6AQ9NYA3 693 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 GRHL1Q9NZI5 618 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 SEPT10Q9P0V9 454 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 KLHL8Q9P2G9 620 aaPredicted RBP6.13□□□□□ -1.43
HMGB3-202ENST00000419110 SAE1Q9UBE0 346 aaPredicted RBP6.13□□□□□ -1.43
HMGB3-202ENST00000419110 PPARGC1AQ9UBK2 798 aaKnown RBP6.13□□□□□ -1.43
HMGB3-202ENST00000419110 ANAPC5Q9UJX4 755 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 VANGL2Q9ULK5 521 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 NEU3Q9UQ49 428 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 YBX2Q9Y2T7 364 aaKnown RBP6.13□□□□□ -1.43
HMGB3-202ENST00000419110 SNX10Q9Y5X0 201 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 SCN8AQ9UQD0 1980 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 MYOFQ9NZM1 2061 aa6.13□□□□□ -1.43
HMGB3-202ENST00000419110 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.12□□□□□ -1.43
HMGB3-202ENST00000419110 A0A1B0GVM2 712 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.12□□□□□ -1.43
HMGB3-202ENST00000419110 TCAF2A6NFQ2 919 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 ARHGAP42A6NI28 874 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 GOLGA6L10A6NI86 522 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 GRXCR1A8MXD5 290 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 E7EVH7 732 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 FAM72CH0Y354 149 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 I6L893 689 aaPredicted RBP6.12□□□□□ -1.43
HMGB3-202ENST00000419110 DFFAO00273 331 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 CHADO15335 359 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 ACSL4O60488 711 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 RAMP2O60895 175 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 CLASP2O75122 1294 aaKnown RBP6.12□□□□□ -1.43
HMGB3-202ENST00000419110 STC2O76061 302 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 ARHGEF15O94989 841 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 OLFM2O95897 454 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 ADH1BP00325 375 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 IVLP07476 585 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 SPATA31D3P0C874 917 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 VAV1P15498 845 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 ITIH2P19823 946 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 TACR2P21452 398 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 IL4RP24394 825 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 RBL1P28749 1068 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms