RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 NNMTP40261 264 aa26.16■■□□□ 1.78
VEGFA-208ENST00000417285 AFF3P51826 1226 aaKnown RBP26.16■■□□□ 1.78
VEGFA-208ENST00000417285 SLC6A3Q01959 620 aa26.16■■□□□ 1.78
VEGFA-208ENST00000417285 SULT2A1Q06520 285 aa26.16■■□□□ 1.78
VEGFA-208ENST00000417285 RAPGEF1Q13905 1077 aa26.16■■□□□ 1.78
VEGFA-208ENST00000417285 RNF219Q5W0B1 726 aaPredicted RBP26.16■■□□□ 1.78
VEGFA-208ENST00000417285 MMS22LQ6ZRQ5 1243 aa26.16■■□□□ 1.78
VEGFA-208ENST00000417285 SLC47A2Q86VL8 602 aa26.16■■□□□ 1.78
VEGFA-208ENST00000417285 C1orf131Q8NDD1 294 aaKnown RBP26.16■■□□□ 1.78
VEGFA-208ENST00000417285 ENOX1Q8TC92 643 aaKnown RBP26.16■■□□□ 1.78
VEGFA-208ENST00000417285 PRMT1Q99873 361 aaKnown RBP26.16■■□□□ 1.78
VEGFA-208ENST00000417285 RRN3Q9NYV6 651 aa26.16■■□□□ 1.78
VEGFA-208ENST00000417285 PCDH15Q96QU1 1955 aa26.16■■□□□ 1.78
VEGFA-208ENST00000417285 EDDM13A0A1B0GTR0 161 aa26.15■■□□□ 1.78
VEGFA-208ENST00000417285 SPAARA0A1B0GVQ0 90 aa26.15■■□□□ 1.78
VEGFA-208ENST00000417285 CER1O95813 267 aa26.15■■□□□ 1.78
VEGFA-208ENST00000417285 ZNF883P0CG24 379 aa26.15■■□□□ 1.78
VEGFA-208ENST00000417285 PNMA6AP0CW24 399 aaPredicted RBP26.15■■□□□ 1.78
VEGFA-208ENST00000417285 PITX1P78337 314 aaPredicted RBP26.15■■□□□ 1.78
VEGFA-208ENST00000417285 KCNMA1Q12791 1236 aa26.15■■□□□ 1.78
VEGFA-208ENST00000417285 C9orf64Q5T6V5 341 aa26.15■■□□□ 1.78
VEGFA-208ENST00000417285 KLHDC7AQ5VTJ3 777 aa26.15■■□□□ 1.78
VEGFA-208ENST00000417285 SLC26A9Q7LBE3 791 aa26.15■■□□□ 1.78
VEGFA-208ENST00000417285 GPT2Q8TD30 523 aa26.15■■□□□ 1.78
VEGFA-208ENST00000417285 GANCQ8TET4 914 aa26.15■■□□□ 1.78
VEGFA-208ENST00000417285 PABPC3Q9H361 631 aaKnown RBP26.15■■□□□ 1.78
VEGFA-208ENST00000417285 PCDHB9Q9Y5E1 797 aa26.15■■□□□ 1.78
VEGFA-208ENST00000417285 SIN3BO75182 1162 aa26.14■■□□□ 1.78
VEGFA-208ENST00000417285 NOS2P35228 1153 aa26.14■■□□□ 1.78
VEGFA-208ENST00000417285 PLK1P53350 603 aa26.14■■□□□ 1.78
VEGFA-208ENST00000417285 DRAP1Q14919 205 aaPredicted RBP26.14■■□□□ 1.78
VEGFA-208ENST00000417285 TEAD4Q15561 434 aa26.14■■□□□ 1.78
VEGFA-208ENST00000417285 DPY19L2P1Q6NXN4 242 aa26.14■■□□□ 1.78
VEGFA-208ENST00000417285 OLFML1Q6UWY5 402 aa26.14■■□□□ 1.78
VEGFA-208ENST00000417285 RBM43Q6ZSC3 357 aaKnown RBP26.14■■□□□ 1.78
VEGFA-208ENST00000417285 FAM183BPQ6ZVS7 135 aa26.14■■□□□ 1.78
VEGFA-208ENST00000417285 CCAR2Q8N163 923 aaKnown RBP26.14■■□□□ 1.78
VEGFA-208ENST00000417285 ZNF397Q8NF99 534 aaPredicted RBP26.14■■□□□ 1.78
VEGFA-208ENST00000417285 SNX19Q92543 992 aa26.14■■□□□ 1.78
VEGFA-208ENST00000417285 PDCL3Q9H2J4 239 aa26.14■■□□□ 1.78
VEGFA-208ENST00000417285 MTG2Q9H4K7 406 aa26.14■■□□□ 1.78
VEGFA-208ENST00000417285 FBXL12Q9NXK8 326 aa26.14■■□□□ 1.78
VEGFA-208ENST00000417285 FHOD1Q9Y613 1164 aa26.14■■□□□ 1.78
VEGFA-208ENST00000417285 ITIH6Q6UXX5 1313 aa26.14■■□□□ 1.77
VEGFA-208ENST00000417285 SH3BP5O60239 455 aa26.13■■□□□ 1.77
VEGFA-208ENST00000417285 GRAP2O75791 330 aa26.13■■□□□ 1.77
VEGFA-208ENST00000417285 PROS1P07225 676 aa26.13■■□□□ 1.77
VEGFA-208ENST00000417285 TPM2P07951 284 aa26.13■■□□□ 1.77
VEGFA-208ENST00000417285 CD27P26842 260 aa26.13■■□□□ 1.77
VEGFA-208ENST00000417285 MATKP42679 507 aa26.13■■□□□ 1.77
VEGFA-208ENST00000417285 TRIP6Q15654 476 aaKnown RBP26.13■■□□□ 1.77
VEGFA-208ENST00000417285 ZNF423Q2M1K9 1284 aa26.13■■□□□ 1.77
VEGFA-208ENST00000417285 DHX40Q8IX18 779 aaKnown RBP26.13■■□□□ 1.77
VEGFA-208ENST00000417285 APCDD1Q8J025 514 aa26.13■■□□□ 1.77
VEGFA-208ENST00000417285 TMEM35BQ8NCS4 154 aa26.13■■□□□ 1.77
VEGFA-208ENST00000417285 BIRC7Q96CA5 298 aa26.13■■□□□ 1.77
VEGFA-208ENST00000417285 SCNM1Q9BWG6 230 aa26.13■■□□□ 1.77
VEGFA-208ENST00000417285 GAREM1Q9H706 876 aa26.13■■□□□ 1.77
VEGFA-208ENST00000417285 SLCO3A1Q9UIG8 710 aa26.13■■□□□ 1.77
VEGFA-208ENST00000417285 KNL1Q8NG31 2342 aa26.13■■□□□ 1.77
VEGFA-208ENST00000417285 SYNJ2BP-COX16A0A087WUM0 186 aa26.12■■□□□ 1.77
VEGFA-208ENST00000417285 A0A1B0GVM2 712 aa26.12■■□□□ 1.77
VEGFA-208ENST00000417285 TCAF2A6NFQ2 919 aa26.12■■□□□ 1.77
VEGFA-208ENST00000417285 TTC34A8MYJ7 566 aa26.12■■□□□ 1.77
VEGFA-208ENST00000417285 ERBB2P04626 1255 aa26.12■■□□□ 1.77
VEGFA-208ENST00000417285 CTSOP43234 321 aaPredicted RBP26.12■■□□□ 1.77
VEGFA-208ENST00000417285 CSNK1EP49674 416 aaKnown RBP26.12■■□□□ 1.77
VEGFA-208ENST00000417285 CST6Q15828 149 aa26.12■■□□□ 1.77
VEGFA-208ENST00000417285 HLA-BQ31612 363 aa26.12■■□□□ 1.77
VEGFA-208ENST00000417285 FBXL22Q6P050 247 aa26.12■■□□□ 1.77
VEGFA-208ENST00000417285 LRSAM1Q6UWE0 723 aa26.12■■□□□ 1.77
VEGFA-208ENST00000417285 NAXDQ8IW45 347 aa26.12■■□□□ 1.77
VEGFA-208ENST00000417285 TAB2Q9NYJ8 693 aa26.12■■□□□ 1.77
VEGFA-208ENST00000417285 COX16Q9P0S2 106 aa26.12■■□□□ 1.77
VEGFA-208ENST00000417285 ADAMTS9Q9P2N4 1935 aa26.12■■□□□ 1.77
VEGFA-208ENST00000417285 DAB1O75553 588 aa26.11■■□□□ 1.77
VEGFA-208ENST00000417285 FSBPO95073 299 aa26.11■■□□□ 1.77
VEGFA-208ENST00000417285 UCHL3P15374 230 aa26.11■■□□□ 1.77
VEGFA-208ENST00000417285 VASPP50552 380 aaPredicted RBP26.11■■□□□ 1.77
VEGFA-208ENST00000417285 NME3Q13232 169 aa26.11■■□□□ 1.77
VEGFA-208ENST00000417285 AUHQ13825 339 aaKnown RBP26.11■■□□□ 1.77
VEGFA-208ENST00000417285 PTPN20Q4JDL3 420 aa26.11■■□□□ 1.77
VEGFA-208ENST00000417285 SASS6Q6UVJ0 657 aa26.11■■□□□ 1.77
VEGFA-208ENST00000417285 RPRD1AQ96P16 312 aaPredicted RBP26.11■■□□□ 1.77
VEGFA-208ENST00000417285 OMDQ99983 421 aa26.11■■□□□ 1.77
VEGFA-208ENST00000417285 NAA15Q9BXJ9 866 aaKnown RBP26.11■■□□□ 1.77
VEGFA-208ENST00000417285 ADAM33Q9BZ11 813 aa26.11■■□□□ 1.77
VEGFA-208ENST00000417285 PLCB1Q9NQ66 1216 aa26.11■■□□□ 1.77
VEGFA-208ENST00000417285 ADAMTS1Q9UHI8 967 aa26.11■■□□□ 1.77
VEGFA-208ENST00000417285 FZD4Q9ULV1 537 aa26.11■■□□□ 1.77
VEGFA-208ENST00000417285 NEUROG3Q9Y4Z2 214 aa26.11■■□□□ 1.77
VEGFA-208ENST00000417285 PCDHGB2Q9Y5G2 931 aa26.11■■□□□ 1.77
VEGFA-208ENST00000417285 CHD6Q8TD26 2715 aa26.1■■□□□ 1.77
VEGFA-208ENST00000417285 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.1■■□□□ 1.77
VEGFA-208ENST00000417285 A0A1B0GVT2 93 aa26.1■■□□□ 1.77
VEGFA-208ENST00000417285 LRRC72A6NJI9 287 aa26.1■■□□□ 1.77
VEGFA-208ENST00000417285 M0QYT0 321 aa26.1■■□□□ 1.77
VEGFA-208ENST00000417285 F9P00740 461 aa26.1■■□□□ 1.77
VEGFA-208ENST00000417285 CYP11B1P15538 503 aa26.1■■□□□ 1.77
VEGFA-208ENST00000417285 SLC8A1P32418 973 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms