RNA–Protein interactions for RNA: ENST00000417239.1

SMIM12-201, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMIM12, Length 684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-201ENST00000417239 FAM129BQ96TA1 746 aa9.08□□□□□ -0.96
SMIM12-201ENST00000417239 SLC25A18Q9H1K4 315 aa9.08□□□□□ -0.96
SMIM12-201ENST00000417239 USP29Q9HBJ7 922 aa9.08□□□□□ -0.96
SMIM12-201ENST00000417239 STRIP2Q9ULQ0 834 aa9.08□□□□□ -0.96
SMIM12-201ENST00000417239 DMTF1Q9Y222 760 aa9.08□□□□□ -0.96
SMIM12-201ENST00000417239 ITIH6Q6UXX5 1313 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 TARSL2A2RTX5 802 aaKnown RBP9.07□□□□□ -0.96
SMIM12-201ENST00000417239 KRT38O76015 456 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 GJB6O95452 261 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 VNN1O95497 513 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 ADH1BP00325 375 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 CENPBP07199 599 aaPredicted RBP9.07□□□□□ -0.96
SMIM12-201ENST00000417239 ALPPL2P10696 532 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 NUDT1P36639 197 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 METAP1P53582 386 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 ST8SIA6P61647 398 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 STAT4Q14765 748 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 TGIF1Q15583 401 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 IGFBP7Q16270 282 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 TBR1Q16650 682 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 FOXR1Q6PIV2 292 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 RBM44Q6ZP01 1051 aaKnown RBP9.07□□□□□ -0.96
SMIM12-201ENST00000417239 SV2BQ7L1I2 683 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 RSRC2Q7L4I2 434 aaKnown RBP9.07□□□□□ -0.96
SMIM12-201ENST00000417239 PRPF39Q86UA1 669 aaKnown RBP9.07□□□□□ -0.96
SMIM12-201ENST00000417239 UNC93AQ86WB7 457 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 TRIM69Q86WT6 500 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 KDM1BQ8NB78 822 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 TMEM145Q8NBT3 493 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 WDR36Q8NI36 951 aaKnown RBP9.07□□□□□ -0.96
SMIM12-201ENST00000417239 TTC17Q96AE7 1141 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 ARRDC3Q96B67 414 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 TMA16Q96EY4 203 aaKnown RBP9.07□□□□□ -0.96
SMIM12-201ENST00000417239 TWNKQ96RR1 684 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 KDM4CQ9H3R0 1056 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 AGPAT3Q9NRZ7 376 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 PANK4Q9NVE7 773 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 KLHL11Q9NVR0 708 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 ACSL6Q9UKU0 697 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 INTS6Q9UL03 887 aaKnown RBP9.07□□□□□ -0.96
SMIM12-201ENST00000417239 CA5BQ9Y2D0 317 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 PCDHGA4Q9Y5G9 962 aa9.07□□□□□ -0.96
SMIM12-201ENST00000417239 OTOGQ6ZRI0 2925 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 CCDC187A0A096LP49 1063 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.06□□□□□ -0.96
SMIM12-201ENST00000417239 EDDM13A0A1B0GTR0 161 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 TTC34A8MYJ7 566 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 PRAMEF26H0Y7S4 382 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 K7ESM1 405 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 SCAMP1O15126 338 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 CASC3O15234 703 aaKnown RBP9.06□□□□□ -0.96
SMIM12-201ENST00000417239 TGFB1I1O43294 461 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 PLRG1O43660 514 aaKnown RBP9.06□□□□□ -0.96
SMIM12-201ENST00000417239 STX6O43752 255 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 PHACTR2O75167 634 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 TCEA3O75764 348 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 NEBLO76041 1014 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 LATS1O95835 1130 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 ASLP04424 464 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 MZF1P28698 734 aaPredicted RBP9.06□□□□□ -0.96
SMIM12-201ENST00000417239 CSKP41240 450 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 ASPAP45381 313 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 CASP4P49662 377 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 YWHAGP61981 247 aaKnown RBP eCLIP9.06□□□□□ -0.96
SMIM12-201ENST00000417239 ZNF177Q13360 481 aaPredicted RBP9.06□□□□□ -0.96
SMIM12-201ENST00000417239 NCOA4Q13772 614 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 CLCA4Q14CN2 919 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 CDKN3Q16667 212 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 SETMARQ53H47 684 aaPredicted RBP9.06□□□□□ -0.96
SMIM12-201ENST00000417239 MPP7Q5T2T1 576 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 ADGRF1Q5T601 910 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 GUSBP11Q6P575 273 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 ZNF564Q8TBZ8 553 aaPredicted RBP9.06□□□□□ -0.96
SMIM12-201ENST00000417239 PLEKHO2Q8TD55 490 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 CYFIP2Q96F07 1278 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 KLHDC7BQ96G42 594 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 FUCA2Q9BTY2 467 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 EVA1BQ9NVM1 165 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 WDR70Q9NW82 654 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 GEMIN8Q9NWZ8 242 aaKnown RBP9.06□□□□□ -0.96
SMIM12-201ENST00000417239 PCDHGA7Q9Y5G6 932 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 CACNA1DQ01668 2161 aa9.06□□□□□ -0.96
SMIM12-201ENST00000417239 SLC7A4O43246 635 aa9.05□□□□□ -0.96
SMIM12-201ENST00000417239 TBL1XO60907 577 aa9.05□□□□□ -0.96
SMIM12-201ENST00000417239 RTN2O75298 545 aa9.05□□□□□ -0.96
SMIM12-201ENST00000417239 CLSTN1O94985 981 aa9.05□□□□□ -0.96
SMIM12-201ENST00000417239 IL1BP01584 269 aa9.05□□□□□ -0.96
SMIM12-201ENST00000417239 C4BPAP04003 597 aaKnown RBP9.05□□□□□ -0.96
SMIM12-201ENST00000417239 SLFN14P0C7P3 912 aa9.05□□□□□ -0.96
SMIM12-201ENST00000417239 SLC5A2P31639 672 aa9.05□□□□□ -0.96
SMIM12-201ENST00000417239 CTSOP43234 321 aaPredicted RBP9.05□□□□□ -0.96
SMIM12-201ENST00000417239 CYP2J2P51589 502 aa9.05□□□□□ -0.96
SMIM12-201ENST00000417239 CLDN10P78369 228 aa9.05□□□□□ -0.96
SMIM12-201ENST00000417239 INCA1Q0VD86 236 aa9.05□□□□□ -0.96
SMIM12-201ENST00000417239 BIRC3Q13489 604 aa9.05□□□□□ -0.96
SMIM12-201ENST00000417239 ELAVL3Q14576 367 aaKnown RBP9.05□□□□□ -0.96
SMIM12-201ENST00000417239 SKIDA1Q1XH10 827 aa9.05□□□□□ -0.96
SMIM12-201ENST00000417239 POM121L1PQ3SYA9 428 aa9.05□□□□□ -0.96
SMIM12-201ENST00000417239 PIK3R6Q5UE93 754 aa9.05□□□□□ -0.96
SMIM12-201ENST00000417239 ZCCHC8Q6NZY4 707 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms