RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 TLR5O60602 858 aa6.37□□□□□ -1.39
LMBR1-204ENST00000415428 ONECUT2O95948 504 aa6.37□□□□□ -1.39
LMBR1-204ENST00000415428 PABPC1P11940 636 aaKnown RBP6.37□□□□□ -1.39
LMBR1-204ENST00000415428 RBMS1P29558 406 aaKnown RBP6.37□□□□□ -1.39
LMBR1-204ENST00000415428 DDIT3P35638 169 aa6.37□□□□□ -1.39
LMBR1-204ENST00000415428 ARPP19P56211 112 aa6.37□□□□□ -1.39
LMBR1-204ENST00000415428 HDAC4P56524 1084 aa6.37□□□□□ -1.39
LMBR1-204ENST00000415428 RAB15P59190 212 aa6.37□□□□□ -1.39
LMBR1-204ENST00000415428 CCDC173Q0VFZ6 552 aa6.37□□□□□ -1.39
LMBR1-204ENST00000415428 TMEM52BQ4KMG9 183 aa6.37□□□□□ -1.39
LMBR1-204ENST00000415428 ZNF517Q6ZMY9 492 aaPredicted RBP6.37□□□□□ -1.39
LMBR1-204ENST00000415428 CARFQ8N187 725 aa6.37□□□□□ -1.39
LMBR1-204ENST00000415428 ARL10Q8N8L6 244 aa6.37□□□□□ -1.39
LMBR1-204ENST00000415428 ZNF548Q8NEK5 533 aaPredicted RBP6.37□□□□□ -1.39
LMBR1-204ENST00000415428 HTR3CQ8WXA8 447 aa6.37□□□□□ -1.39
LMBR1-204ENST00000415428 JAKMIP2Q96AA8 810 aa6.37□□□□□ -1.39
LMBR1-204ENST00000415428 CENPTQ96BT3 561 aa6.37□□□□□ -1.39
LMBR1-204ENST00000415428 PGAP3Q96FM1 320 aaPredicted RBP6.37□□□□□ -1.39
LMBR1-204ENST00000415428 TRIM62Q9BVG3 475 aa6.37□□□□□ -1.39
LMBR1-204ENST00000415428 EPB41L1Q9H4G0 881 aa6.37□□□□□ -1.39
LMBR1-204ENST00000415428 CCSER2Q9H7U1 834 aa6.37□□□□□ -1.39
LMBR1-204ENST00000415428 C5AR2Q9P296 337 aa6.37□□□□□ -1.39
LMBR1-204ENST00000415428 GTF3C4Q9UKN8 822 aa6.37□□□□□ -1.39
LMBR1-204ENST00000415428 NOL7Q9UMY1 257 aaKnown RBP6.37□□□□□ -1.39
LMBR1-204ENST00000415428 COQ4Q9Y3A0 265 aa6.37□□□□□ -1.39
LMBR1-204ENST00000415428 BTBD18B2RXH4 712 aa6.36□□□□□ -1.39
LMBR1-204ENST00000415428 E9PMD0 336 aa6.36□□□□□ -1.39
LMBR1-204ENST00000415428 WNT9AO14904 365 aa6.36□□□□□ -1.39
LMBR1-204ENST00000415428 ASS1P00966 412 aaKnown RBP6.36□□□□□ -1.39
LMBR1-204ENST00000415428 DNTTP04053 509 aa6.36□□□□□ -1.39
LMBR1-204ENST00000415428 GNL1P36915 607 aaPredicted RBP6.36□□□□□ -1.39
LMBR1-204ENST00000415428 HNRNPKP61978 463 aaKnown RBP eCLIP6.36□□□□□ -1.391e-6■■□□□ 13.4
LMBR1-204ENST00000415428 CCDC15Q0P6D6 951 aa6.36□□□□□ -1.39
LMBR1-204ENST00000415428 EFHC2Q5JST6 749 aa6.36□□□□□ -1.39
LMBR1-204ENST00000415428 MACC1Q6ZN28 852 aa6.36□□□□□ -1.39
LMBR1-204ENST00000415428 PRPF39Q86UA1 669 aaKnown RBP6.36□□□□□ -1.39
LMBR1-204ENST00000415428 SNX29Q8TEQ0 813 aa6.36□□□□□ -1.39
LMBR1-204ENST00000415428 ZNF518BQ9C0D4 1074 aa6.36□□□□□ -1.39
LMBR1-204ENST00000415428 PDZD2O15018 2839 aa6.36□□□□□ -1.39
LMBR1-204ENST00000415428 NEMP2A6NFY4 417 aa6.36□□□□□ -1.39
LMBR1-204ENST00000415428 F8VP50 259 aa6.36□□□□□ -1.39
LMBR1-204ENST00000415428 MCF2LO15068 1137 aa6.36□□□□□ -1.39
LMBR1-204ENST00000415428 STX6O43752 255 aa6.36□□□□□ -1.39
LMBR1-204ENST00000415428 ZRANB2O95218 330 aaKnown RBP eCLIP6.36□□□□□ -1.39
LMBR1-204ENST00000415428 LUC7L3O95232 432 aaKnown RBP6.36□□□□□ -1.39
LMBR1-204ENST00000415428 ITGB3P05106 788 aa6.36□□□□□ -1.39
LMBR1-204ENST00000415428 ATP5BP06576 529 aaKnown RBP6.36□□□□□ -1.39
LMBR1-204ENST00000415428 FOSL1P15407 271 aa6.36□□□□□ -1.39
LMBR1-204ENST00000415428 LIG1P18858 919 aa6.36□□□□□ -1.39
LMBR1-204ENST00000415428 FAM46CQ5VWP2 391 aa6.36□□□□□ -1.39
LMBR1-204ENST00000415428 ARMCX6Q7L4S7 300 aa6.36□□□□□ -1.39
LMBR1-204ENST00000415428 RBM15Q96T37 977 aaKnown RBP eCLIP6.36□□□□□ -1.39
LMBR1-204ENST00000415428 NMUR1Q9HB89 426 aa6.36□□□□□ -1.39
LMBR1-204ENST00000415428 NCOA5Q9HCD5 579 aaKnown RBP6.36□□□□□ -1.39
LMBR1-204ENST00000415428 KCNU1A8MYU2 1149 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 C9orf172C9J069 976 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 H3BM21 787 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 XPO1O14980 1071 aaKnown RBP6.35□□□□□ -1.39
LMBR1-204ENST00000415428 ACADMP11310 421 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 PLCG1P19174 1290 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 GUCY2FP51841 1108 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 EPHA4P54764 986 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 ZACNQ401N2 412 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 CHPFQ8IZ52 775 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 EID2Q8N6I1 236 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 ZSCAN1Q8NBB4 408 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 HJURPQ8NCD3 748 aaPredicted RBP6.35□□□□□ -1.39
LMBR1-204ENST00000415428 ZNF516Q92618 1163 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 NKD1Q969G9 470 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 INTS6Q9UL03 887 aaKnown RBP6.35□□□□□ -1.39
LMBR1-204ENST00000415428 ZNF462Q96JM2 2506 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 SLC12A8A0AV02 714 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 SPINT1O43278 529 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 USP12O75317 370 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 VNN1O95497 513 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 TGM2P21980 687 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 HNRNPA2B1P22626 353 aaKnown RBP6.35□□□□□ -1.39
LMBR1-204ENST00000415428 BDNFP23560 247 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 ATP1A2P50993 1020 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 MC2RQ01718 297 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 EIF2B5Q13144 721 aaKnown RBP6.35□□□□□ -1.39
LMBR1-204ENST00000415428 RPUSD3Q6P087 351 aaKnown RBP6.35□□□□□ -1.39
LMBR1-204ENST00000415428 IGFL2Q6UWQ7 119 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 TRAPPC11Q7Z392 1133 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 HORMAD1Q86X24 394 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 GOLGA5Q8TBA6 731 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 FCRL2Q96LA5 508 aaPredicted RBP6.35□□□□□ -1.39
LMBR1-204ENST00000415428 PRICKLE1Q96MT3 831 aaPredicted RBP6.35□□□□□ -1.39
LMBR1-204ENST00000415428 CCDC43Q96MW1 224 aaKnown RBP6.35□□□□□ -1.39
LMBR1-204ENST00000415428 TAAR9Q96RI9 348 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 SDCBP2Q9H190 292 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 ANO2Q9NQ90 1003 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 RBAKQ9NYW8 714 aaPredicted RBP6.35□□□□□ -1.39
LMBR1-204ENST00000415428 AGAP1Q9UPQ3 857 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 TLR6Q9Y2C9 796 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 CHD8Q9HCK8 2581 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 MN1Q10571 1320 aaPredicted RBP6.35□□□□□ -1.39
LMBR1-204ENST00000415428 FAM237AA0A1B0GTK4 181 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 A0A1W2PQ72 361 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 DRGXA6NNA5 263 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms