RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 TRIM5Q9C035 493 aa17.32■□□□□ 0.36
SF1-207ENST00000413951 GAREM1Q9H706 876 aa17.32■□□□□ 0.36
SF1-207ENST00000413951 SGK2Q9HBY8 427 aa17.32■□□□□ 0.36
SF1-207ENST00000413951 EIF2B4Q9UI10 523 aaKnown RBP17.32■□□□□ 0.36
SF1-207ENST00000413951 NOCTQ9UK39 431 aaKnown RBP17.32■□□□□ 0.36
SF1-207ENST00000413951 CAPN11Q9UMQ6 739 aa17.32■□□□□ 0.36
SF1-207ENST00000413951 CEP295Q9C0D2 2601 aa17.32■□□□□ 0.36
SF1-207ENST00000413951 PCDH15Q96QU1 1955 aa17.31■□□□□ 0.36
SF1-207ENST00000413951 FLRT2O43155 660 aa17.31■□□□□ 0.36
SF1-207ENST00000413951 THAP12O43422 761 aa17.31■□□□□ 0.36
SF1-207ENST00000413951 MED7O43513 233 aa17.31■□□□□ 0.36
SF1-207ENST00000413951 ACSL4O60488 711 aa17.31■□□□□ 0.36
SF1-207ENST00000413951 TBL1XO60907 577 aa17.31■□□□□ 0.36
SF1-207ENST00000413951 GFPT2O94808 682 aa17.31■□□□□ 0.36
SF1-207ENST00000413951 MOCS3O95396 460 aa17.31■□□□□ 0.36
SF1-207ENST00000413951 TOP3BO95985 862 aaKnown RBP17.31■□□□□ 0.36
SF1-207ENST00000413951 IGLV3-27P01718 113 aa17.31■□□□□ 0.36
SF1-207ENST00000413951 ZNF75DP51815 510 aa17.31■□□□□ 0.36
SF1-207ENST00000413951 TRIM14Q14142 442 aa17.31■□□□□ 0.36
SF1-207ENST00000413951 PMF1Q6P1K2 205 aa17.31■□□□□ 0.36
SF1-207ENST00000413951 BEND5Q7L4P6 421 aa17.31■□□□□ 0.36
SF1-207ENST00000413951 ADIPOR2Q86V24 386 aa17.31■□□□□ 0.36
SF1-207ENST00000413951 MFN1Q8IWA4 741 aa17.31■□□□□ 0.36
SF1-207ENST00000413951 KDM1BQ8NB78 822 aa17.31■□□□□ 0.36
SF1-207ENST00000413951 OR2I1PQ8NGU4 316 aa17.31■□□□□ 0.36
SF1-207ENST00000413951 SETD7Q8WTS6 366 aaKnown RBP17.31■□□□□ 0.36
SF1-207ENST00000413951 SKA1Q96BD8 255 aa17.31■□□□□ 0.36
SF1-207ENST00000413951 TM7SF3Q9NS93 570 aa17.31■□□□□ 0.36
SF1-207ENST00000413951 AIPL1Q9NZN9 384 aa17.31■□□□□ 0.36
SF1-207ENST00000413951 KIAA1522Q9P206 1035 aaPredicted RBP17.31■□□□□ 0.36
SF1-207ENST00000413951 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.31■□□□□ 0.362e-9■■□□□ 12.9
SF1-207ENST00000413951 LRRC53A6NM62 1247 aa17.3■□□□□ 0.36
SF1-207ENST00000413951 MSI1O43347 362 aaKnown RBP17.3■□□□□ 0.36
SF1-207ENST00000413951 SEMA4FO95754 770 aa17.3■□□□□ 0.36
SF1-207ENST00000413951 HLA-EP13747 358 aa17.3■□□□□ 0.36
SF1-207ENST00000413951 GPD2P43304 727 aa17.3■□□□□ 0.36
SF1-207ENST00000413951 RPL34P49207 117 aaKnown RBP17.3■□□□□ 0.36
SF1-207ENST00000413951 RGS7P49802 495 aa17.3■□□□□ 0.36
SF1-207ENST00000413951 ZBED6P86452 979 aa17.3■□□□□ 0.36
SF1-207ENST00000413951 ARID5BQ14865 1188 aa17.3■□□□□ 0.36
SF1-207ENST00000413951 E4F1Q66K89 784 aaPredicted RBP17.3■□□□□ 0.36
SF1-207ENST00000413951 ZNF776Q68DI1 518 aaPredicted RBP17.3■□□□□ 0.36
SF1-207ENST00000413951 USP30Q70CQ3 517 aa17.3■□□□□ 0.36
SF1-207ENST00000413951 IRF2BP2Q7Z5L9 587 aa17.3■□□□□ 0.36
SF1-207ENST00000413951 NOP9Q86U38 636 aaKnown RBP17.3■□□□□ 0.36
SF1-207ENST00000413951 FAM124AQ86V42 546 aa17.3■□□□□ 0.36
SF1-207ENST00000413951 ZNF677Q86XU0 584 aa17.3■□□□□ 0.36
SF1-207ENST00000413951 CHCHD4Q8N4Q1 142 aa17.3■□□□□ 0.36
SF1-207ENST00000413951 FIBINQ8TAL6 211 aa17.3■□□□□ 0.36
SF1-207ENST00000413951 STK32AQ8WU08 396 aa17.3■□□□□ 0.36
SF1-207ENST00000413951 CYB5D2Q8WUJ1 264 aa17.3■□□□□ 0.36
SF1-207ENST00000413951 SNX19Q92543 992 aa17.3■□□□□ 0.36
SF1-207ENST00000413951 SYN2Q92777 582 aaPredicted RBP17.3■□□□□ 0.36
SF1-207ENST00000413951 SYT11Q9BT88 431 aa17.3■□□□□ 0.36
SF1-207ENST00000413951 KLK13Q9UKR3 277 aa17.3■□□□□ 0.36
SF1-207ENST00000413951 TPX2Q9ULW0 747 aaKnown RBP17.3■□□□□ 0.36
SF1-207ENST00000413951 TLR6Q9Y2C9 796 aa17.3■□□□□ 0.36
SF1-207ENST00000413951 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.3■□□□□ 0.36
SF1-207ENST00000413951 PCNX2A6NKB5 2137 aa17.3■□□□□ 0.36
SF1-207ENST00000413951 CAPN9O14815 690 aa17.29■□□□□ 0.36
SF1-207ENST00000413951 DFNA5O60443 496 aa17.29■□□□□ 0.36
SF1-207ENST00000413951 FTH1P19P0C7X4 201 aa17.29■□□□□ 0.36
SF1-207ENST00000413951 FERP16591 822 aa17.29■□□□□ 0.36
SF1-207ENST00000413951 CDH5P33151 784 aaPredicted RBP17.29■□□□□ 0.36
SF1-207ENST00000413951 PRKCIP41743 596 aa17.29■□□□□ 0.36
SF1-207ENST00000413951 GRIA4P48058 902 aa17.29■□□□□ 0.36
SF1-207ENST00000413951 TBX2Q13207 712 aaPredicted RBP17.29■□□□□ 0.36
SF1-207ENST00000413951 CDH18Q13634 790 aa17.29■□□□□ 0.36
SF1-207ENST00000413951 PTPRNQ16849 979 aa17.29■□□□□ 0.36
SF1-207ENST00000413951 HLA-BQ31612 363 aa17.29■□□□□ 0.36
SF1-207ENST00000413951 INAVAQ3KP66 663 aa17.29■□□□□ 0.36
SF1-207ENST00000413951 DENND1BQ6P3S1 775 aa17.29■□□□□ 0.36
SF1-207ENST00000413951 CACUL1Q86Y37 369 aa17.29■□□□□ 0.36
SF1-207ENST00000413951 TTC17Q96AE7 1141 aa17.29■□□□□ 0.36
SF1-207ENST00000413951 NUCKS1Q9H1E3 243 aaKnown RBP17.29■□□□□ 0.36
SF1-207ENST00000413951 PRSS16Q9NQE7 514 aa17.29■□□□□ 0.36
SF1-207ENST00000413951 PCOLCE2Q9UKZ9 415 aa17.29■□□□□ 0.36
SF1-207ENST00000413951 SRRM3A6NNA2 597 aaPredicted RBP17.28■□□□□ 0.36
SF1-207ENST00000413951 APOEP02649 317 aa17.28■□□□□ 0.36
SF1-207ENST00000413951 CD27P26842 260 aa17.28■□□□□ 0.36
SF1-207ENST00000413951 HNRNPH3P31942 346 aaKnown RBP17.28■□□□□ 0.36
SF1-207ENST00000413951 RPS14P62263 151 aaKnown RBP17.28■□□□□ 0.36
SF1-207ENST00000413951 FAM193AP78312 1265 aa17.28■□□□□ 0.36
SF1-207ENST00000413951 CDR2Q01850 454 aa17.28■□□□□ 0.36
SF1-207ENST00000413951 MTA1Q13330 715 aa17.28■□□□□ 0.36
SF1-207ENST00000413951 C1orf216Q8TAB5 229 aa17.28■□□□□ 0.36
SF1-207ENST00000413951 FAM149B1Q96BN6 582 aa17.28■□□□□ 0.36
SF1-207ENST00000413951 CAMK1GQ96NX5 476 aa17.28■□□□□ 0.36
SF1-207ENST00000413951 PPP1R9BQ96SB3 815 aa17.28■□□□□ 0.36
SF1-207ENST00000413951 MIS12Q9H081 205 aa17.28■□□□□ 0.36
SF1-207ENST00000413951 ST7Q9NRC1 585 aa17.28■□□□□ 0.36
SF1-207ENST00000413951 TJP2Q9UDY2 1190 aa17.28■□□□□ 0.36
SF1-207ENST00000413951 SLC12A6Q9UHW9 1150 aa17.28■□□□□ 0.36
SF1-207ENST00000413951 LUC7L2Q9Y383 392 aaKnown RBP17.28■□□□□ 0.36
SF1-207ENST00000413951 TARSL2A2RTX5 802 aaKnown RBP17.27■□□□□ 0.36
SF1-207ENST00000413951 CBFA2T3O75081 653 aa17.27■□□□□ 0.36
SF1-207ENST00000413951 GABBR2O75899 941 aa17.27■□□□□ 0.36
SF1-207ENST00000413951 LSM8O95777 96 aaKnown RBP17.27■□□□□ 0.36
SF1-207ENST00000413951 SRPRAP08240 638 aaKnown RBP17.27■□□□□ 0.36
SF1-207ENST00000413951 CCDC172P0C7W6 258 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms