RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 COL28A1Q2UY09 1125 aa25.23■■□□□ 1.63
AC005540.1-201ENST00000413911 KLHL10Q6JEL2 608 aa25.23■■□□□ 1.63
AC005540.1-201ENST00000413911 ZNF557Q8N988 423 aaPredicted RBP25.23■■□□□ 1.63
AC005540.1-201ENST00000413911 FAM149B1Q96BN6 582 aa25.23■■□□□ 1.63
AC005540.1-201ENST00000413911 ST7Q9NRC1 585 aa25.23■■□□□ 1.63
AC005540.1-201ENST00000413911 CNTN6Q9UQ52 1028 aa25.23■■□□□ 1.63
AC005540.1-201ENST00000413911 NCKAP1Q9Y2A7 1128 aa25.23■■□□□ 1.63
AC005540.1-201ENST00000413911 VILLO15195 856 aa25.22■■□□□ 1.63
AC005540.1-201ENST00000413911 P4HA2O15460 535 aa25.22■■□□□ 1.63
AC005540.1-201ENST00000413911 PAPSS1O43252 624 aaPredicted RBP25.22■■□□□ 1.63
AC005540.1-201ENST00000413911 TNFSF14O43557 240 aa25.22■■□□□ 1.63
AC005540.1-201ENST00000413911 RACK1P63244 317 aaKnown RBP25.22■■□□□ 1.63
AC005540.1-201ENST00000413911 CDH18Q13634 790 aa25.22■■□□□ 1.63
AC005540.1-201ENST00000413911 SHBQ15464 509 aa25.22■■□□□ 1.63
AC005540.1-201ENST00000413911 ZC3H12AQ5D1E8 599 aaKnown RBP25.22■■□□□ 1.63
AC005540.1-201ENST00000413911 LGI2Q8N0V4 545 aa25.22■■□□□ 1.63
AC005540.1-201ENST00000413911 AADATQ8N5Z0 425 aa25.22■■□□□ 1.63
AC005540.1-201ENST00000413911 KDM1BQ8NB78 822 aa25.22■■□□□ 1.63
AC005540.1-201ENST00000413911 DDX50Q9BQ39 737 aaKnown RBP25.22■■□□□ 1.63
AC005540.1-201ENST00000413911 SLC4A5Q9BY07 1137 aa25.22■■□□□ 1.63
AC005540.1-201ENST00000413911 ACP6Q9NPH0 428 aa25.22■■□□□ 1.63
AC005540.1-201ENST00000413911 SCML1Q9UN30 329 aa25.22■■□□□ 1.63
AC005540.1-201ENST00000413911 GOLGA4Q13439 2230 aaKnown RBP25.22■■□□□ 1.63
AC005540.1-201ENST00000413911 TP53BP1Q12888 1972 aaPredicted RBP25.22■■□□□ 1.63
AC005540.1-201ENST00000413911 ITIH6Q6UXX5 1313 aa25.21■■□□□ 1.63
AC005540.1-201ENST00000413911 A0A1B0GTQ1 180 aa25.21■■□□□ 1.63
AC005540.1-201ENST00000413911 GOLGA6L4A6NEF3 574 aa25.21■■□□□ 1.63
AC005540.1-201ENST00000413911 RNASEH2AO75792 299 aaKnown RBP25.21■■□□□ 1.63
AC005540.1-201ENST00000413911 SLC8A1P32418 973 aa25.21■■□□□ 1.63
AC005540.1-201ENST00000413911 KCNH2Q12809 1159 aa25.21■■□□□ 1.63
AC005540.1-201ENST00000413911 STIM1Q13586 685 aa25.21■■□□□ 1.63
AC005540.1-201ENST00000413911 CCDC157Q569K6 752 aa25.21■■□□□ 1.63
AC005540.1-201ENST00000413911 RAP1GAP2Q684P5 730 aa25.21■■□□□ 1.63
AC005540.1-201ENST00000413911 ADAT2Q7Z6V5 191 aaKnown RBP25.21■■□□□ 1.63
AC005540.1-201ENST00000413911 GATAD2AQ86YP4 633 aa25.21■■□□□ 1.63
AC005540.1-201ENST00000413911 TRIM59Q8IWR1 403 aa25.21■■□□□ 1.63
AC005540.1-201ENST00000413911 NELFBQ8WX92 580 aa25.21■■□□□ 1.63
AC005540.1-201ENST00000413911 RPL10LQ96L21 214 aaKnown RBP25.21■■□□□ 1.63
AC005540.1-201ENST00000413911 GTPBP4Q9BZE4 634 aaKnown RBP25.21■■□□□ 1.63
AC005540.1-201ENST00000413911 ADAMTS1Q9UHI8 967 aa25.21■■□□□ 1.63
AC005540.1-201ENST00000413911 TARSL2A2RTX5 802 aaKnown RBP25.2■■□□□ 1.62
AC005540.1-201ENST00000413911 TRABD2BA6NFA1 517 aa25.2■■□□□ 1.62
AC005540.1-201ENST00000413911 RNASEH1O60930 286 aaKnown RBP25.2■■□□□ 1.62
AC005540.1-201ENST00000413911 IGLV3-25P01717 112 aa25.2■■□□□ 1.62
AC005540.1-201ENST00000413911 SRPRAP08240 638 aaKnown RBP25.2■■□□□ 1.62
AC005540.1-201ENST00000413911 STK19P49842 368 aaPredicted RBP25.2■■□□□ 1.62
AC005540.1-201ENST00000413911 ECT2LQ008S8 904 aa25.2■■□□□ 1.62
AC005540.1-201ENST00000413911 EIF4EBP2Q13542 120 aaPredicted RBP25.2■■□□□ 1.62
AC005540.1-201ENST00000413911 TAF5Q15542 800 aa25.2■■□□□ 1.62
AC005540.1-201ENST00000413911 SMAD1Q15797 465 aaKnown RBP25.2■■□□□ 1.62
AC005540.1-201ENST00000413911 BEND5Q7L4P6 421 aa25.2■■□□□ 1.62
AC005540.1-201ENST00000413911 STK40Q8N2I9 435 aa25.2■■□□□ 1.62
AC005540.1-201ENST00000413911 PTPRN2Q92932 1015 aa25.2■■□□□ 1.62
AC005540.1-201ENST00000413911 ACE2Q9BYF1 805 aaPredicted RBP25.2■■□□□ 1.62
AC005540.1-201ENST00000413911 INTS2Q9H0H0 1204 aaKnown RBP25.2■■□□□ 1.62
AC005540.1-201ENST00000413911 TJP2Q9UDY2 1190 aa25.2■■□□□ 1.62
AC005540.1-201ENST00000413911 A0A1W2PR77 199 aa25.19■■□□□ 1.62
AC005540.1-201ENST00000413911 TYW5A2RUC4 315 aaKnown RBP25.19■■□□□ 1.62
AC005540.1-201ENST00000413911 E5RJQ4 531 aa25.19■■□□□ 1.62
AC005540.1-201ENST00000413911 CBX4O00257 560 aa25.19■■□□□ 1.62
AC005540.1-201ENST00000413911 VAV1P15498 845 aa25.19■■□□□ 1.62
AC005540.1-201ENST00000413911 TACR2P21452 398 aa25.19■■□□□ 1.62
AC005540.1-201ENST00000413911 PSMD8P48556 350 aa25.19■■□□□ 1.62
AC005540.1-201ENST00000413911 METAP1P53582 386 aa25.19■■□□□ 1.62
AC005540.1-201ENST00000413911 C21orf59P57076 290 aa25.19■■□□□ 1.62
AC005540.1-201ENST00000413911 CYP4F3Q08477 520 aa25.19■■□□□ 1.62
AC005540.1-201ENST00000413911 CETN1Q12798 172 aa25.19■■□□□ 1.62
AC005540.1-201ENST00000413911 DHRS13Q6UX07 377 aa25.19■■□□□ 1.62
AC005540.1-201ENST00000413911 PDZD3Q86UT5 571 aa25.19■■□□□ 1.62
AC005540.1-201ENST00000413911 OR2T34Q8NGX1 318 aa25.19■■□□□ 1.62
AC005540.1-201ENST00000413911 HNRNPLLQ8WVV9 542 aaKnown RBP25.19■■□□□ 1.62
AC005540.1-201ENST00000413911 DKK4Q9UBT3 224 aa25.19■■□□□ 1.62
AC005540.1-201ENST00000413911 FZD4Q9ULV1 537 aa25.19■■□□□ 1.62
AC005540.1-201ENST00000413911 CTNND2Q9UQB3 1225 aa25.19■■□□□ 1.62
AC005540.1-201ENST00000413911 NYNRINQ9P2P1 1898 aaKnown RBP25.18■■□□□ 1.62
AC005540.1-201ENST00000413911 EDDM13A0A1B0GTR0 161 aa25.18■■□□□ 1.62
AC005540.1-201ENST00000413911 TRUB2O95900 331 aaKnown RBP25.18■■□□□ 1.62
AC005540.1-201ENST00000413911 KRT5P13647 590 aa25.18■■□□□ 1.62
AC005540.1-201ENST00000413911 STX17P56962 302 aa25.18■■□□□ 1.62
AC005540.1-201ENST00000413911 TMEM110Q86TL2 294 aa25.18■■□□□ 1.62
AC005540.1-201ENST00000413911 CHSY1Q86X52 802 aa25.18■■□□□ 1.62
AC005540.1-201ENST00000413911 CIR1Q86X95 450 aaPredicted RBP25.18■■□□□ 1.62
AC005540.1-201ENST00000413911 GALNT15Q8N3T1 639 aa25.18■■□□□ 1.62
AC005540.1-201ENST00000413911 ELF4Q99607 663 aaPredicted RBP25.18■■□□□ 1.62
AC005540.1-201ENST00000413911 PRMT1Q99873 361 aaKnown RBP25.18■■□□□ 1.62
AC005540.1-201ENST00000413911 OMDQ99983 421 aa25.18■■□□□ 1.62
AC005540.1-201ENST00000413911 LRRC72A6NJI9 287 aa25.17■■□□□ 1.62
AC005540.1-201ENST00000413911 SART1O43290 800 aaKnown RBP25.17■■□□□ 1.62
AC005540.1-201ENST00000413911 LETM1O95202 739 aaPredicted RBP25.17■■□□□ 1.62
AC005540.1-201ENST00000413911 MZF1P28698 734 aaPredicted RBP25.17■■□□□ 1.62
AC005540.1-201ENST00000413911 ACADSBP45954 432 aa25.17■■□□□ 1.62
AC005540.1-201ENST00000413911 ADPRHP54922 357 aa25.17■■□□□ 1.62
AC005540.1-201ENST00000413911 CLDN6P56747 220 aa25.17■■□□□ 1.62
AC005540.1-201ENST00000413911 MORC3Q14149 939 aa25.17■■□□□ 1.62
AC005540.1-201ENST00000413911 SOWAHCQ53LP3 525 aaPredicted RBP25.17■■□□□ 1.62
AC005540.1-201ENST00000413911 FOXR2Q6PJQ5 311 aa25.17■■□□□ 1.62
AC005540.1-201ENST00000413911 ELOA2Q8IYF1 753 aaPredicted RBP25.17■■□□□ 1.62
AC005540.1-201ENST00000413911 STK32AQ8WU08 396 aa25.17■■□□□ 1.62
AC005540.1-201ENST00000413911 ZNF606Q8WXB4 792 aa25.17■■□□□ 1.62
AC005540.1-201ENST00000413911 UBE2TQ9NPD8 197 aaPredicted RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms