RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 BRMS1LQ5PSV4 323 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 NOL9Q5SY16 702 aaKnown RBP17.62■□□□□ 0.41
PHRF1-202ENST00000413872 C16orf59Q7L2K0 433 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 ZFP42Q96MM3 310 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 CORO1BQ9BR76 489 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 NAALADL1Q9UQQ1 740 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 A0A0B4J269 797 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 PSMD12O00232 456 aaPredicted RBP17.62■□□□□ 0.41
PHRF1-202ENST00000413872 TRIM13O60858 407 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 CAPZA2P47755 286 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 OVGP1Q12889 678 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 PCID2Q5JVF3 399 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 LPPQ93052 612 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 CAPNS2Q96L46 248 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 C12orf42Q96LP6 360 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 SIKE1Q9BRV8 207 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 TTPALQ9BTX7 342 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 FUT8Q9BYC5 575 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 SHCBP1LQ9BZQ2 653 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 NCANO14594 1321 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 ANKRD26Q9UPS8 1709 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 TLL1O43897 1013 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 KATNA1O75449 491 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 SKIV2L2P42285 1042 aaKnown RBP17.62■□□□□ 0.41
PHRF1-202ENST00000413872 NR6A1Q15406 480 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 HSDL1Q3SXM5 330 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 AP1ARQ63HQ0 302 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 KRT78Q8N1N4 520 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 ZCCHC9Q8N567 271 aaKnown RBP17.62■□□□□ 0.41
PHRF1-202ENST00000413872 OR56A4Q8NGH8 313 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 PHF21AQ96BD5 680 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 ELMO3Q96BJ8 720 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 FAM136AQ96C01 138 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 DUSP16Q9BY84 665 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 MIEF1Q9NQG6 463 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 MPP6Q9NZW5 540 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 PCDHA2Q9Y5H9 948 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 OPLAHO14841 1288 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 PEX5P50542 639 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 CSTF3Q12996 717 aaKnown RBP17.61■□□□□ 0.41
PHRF1-202ENST00000413872 BMPR2Q13873 1038 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 RAP1GAP2Q684P5 730 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 TPGS1Q6ZTW0 290 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 MON1AQ86VX9 555 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 TDRD5Q8NAT2 981 aaKnown RBP17.61■□□□□ 0.41
PHRF1-202ENST00000413872 OR5B17Q8NGF7 314 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 SEMA4AQ9H3S1 761 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 FBXO10Q9UK96 956 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 QSOX1O00391 747 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 B4GALT5O43286 388 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 ATP4AP20648 1035 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 RPL21P46778 160 aaKnown RBP17.61■□□□□ 0.41
PHRF1-202ENST00000413872 ATXN3P54252 364 aaPredicted RBP17.61■□□□□ 0.41
PHRF1-202ENST00000413872 PPP1R15BQ5SWA1 713 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 GLIS3Q8NEA6 775 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 PARVBQ9HBI1 364 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 MYO5BQ9ULV0 1848 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 ABCC6O95255 1503 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 CHRNB3Q05901 458 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 NFYCQ13952 458 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 BOP1Q14137 746 aaKnown RBP17.61■□□□□ 0.41
PHRF1-202ENST00000413872 VSTM1Q6UX27 236 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 FAM35AQ86V20 835 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 TRIM69Q86WT6 500 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 DNAAF5Q86Y56 855 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 A0A096LPK6 155 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 SNTNA6NMZ2 147 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 PDE2AO00408 941 aaPredicted RBP17.61■□□□□ 0.41
PHRF1-202ENST00000413872 CCNT2O60583 730 aaKnown RBP17.61■□□□□ 0.41
PHRF1-202ENST00000413872 VPS4BO75351 444 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 MATKP42679 507 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 ACTN3Q08043 901 aaPredicted RBP17.61■□□□□ 0.41
PHRF1-202ENST00000413872 CYTH1Q15438 398 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 IL17AQ16552 155 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 MIIPQ5JXC2 388 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 APOPT1Q96IL0 206 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 ATP13A3Q9H7F0 1226 aa17.61■□□□□ 0.41
PHRF1-202ENST00000413872 A0A087X1B8 175 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 UNCXA6NJT0 531 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 KPNA5O15131 536 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 ZBTB14O43829 449 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 CATP04040 527 aaKnown RBP17.6■□□□□ 0.41
PHRF1-202ENST00000413872 PSMA3P25788 255 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 THOP1P52888 689 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 NOMO3P69849 1222 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 DGKZQ13574 1117 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 TSHZ1Q6ZSZ6 1077 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 CYP4Z1Q86W10 505 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 SNRNP25Q9BV90 132 aaKnown RBP17.6■□□□□ 0.41
PHRF1-202ENST00000413872 ETNK2Q9NVF9 386 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 PNMA8BQ9ULN7 279 aaPredicted RBP17.6■□□□□ 0.41
PHRF1-202ENST00000413872 SEC24DO94855 1032 aaPredicted RBP17.6■□□□□ 0.41
PHRF1-202ENST00000413872 STAU1O95793 577 aaKnown RBP17.6■□□□□ 0.41
PHRF1-202ENST00000413872 DGKAP23743 735 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 AQP5P55064 265 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 MRPS5P82675 430 aaKnown RBP17.6■□□□□ 0.41
PHRF1-202ENST00000413872 C15orf59Q2T9L4 293 aaPredicted RBP17.6■□□□□ 0.41
PHRF1-202ENST00000413872 N4BP2L1Q5TBK1 243 aaPredicted RBP17.6■□□□□ 0.41
PHRF1-202ENST00000413872 C9orf57Q5W0N0 161 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 TNFRSF25Q93038 417 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms