RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 CHRNB2P17787 502 aa16.19■□□□□ 0.18
MCF2L-211ENST00000413354 RDXP35241 583 aaKnown RBP16.19■□□□□ 0.18
MCF2L-211ENST00000413354 FLT3P36888 993 aa16.19■□□□□ 0.18
MCF2L-211ENST00000413354 GSCP56915 257 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-211ENST00000413354 TPM4P67936 248 aa16.19■□□□□ 0.18
MCF2L-211ENST00000413354 CENPCQ03188 943 aa16.19■□□□□ 0.18
MCF2L-211ENST00000413354 ZBTB16Q05516 673 aa16.19■□□□□ 0.18
MCF2L-211ENST00000413354 TTC31Q49AM3 519 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-211ENST00000413354 FSCBQ5H9T9 825 aa16.19■□□□□ 0.18
MCF2L-211ENST00000413354 SYCP2LQ5T4T6 812 aa16.19■□□□□ 0.18
MCF2L-211ENST00000413354 STPG1Q5TH74 334 aa16.19■□□□□ 0.18
MCF2L-211ENST00000413354 PEAR1Q5VY43 1037 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-211ENST00000413354 TCEAL6Q6IPX3 200 aa16.19■□□□□ 0.18
MCF2L-211ENST00000413354 MMS22LQ6ZRQ5 1243 aa16.19■□□□□ 0.18
MCF2L-211ENST00000413354 TCEAL3Q969E4 200 aa16.19■□□□□ 0.18
MCF2L-211ENST00000413354 HSPA12BQ96MM6 686 aa16.19■□□□□ 0.18
MCF2L-211ENST00000413354 TBCBQ99426 244 aa16.19■□□□□ 0.18
MCF2L-211ENST00000413354 C11orf70Q9BRQ4 267 aa16.19■□□□□ 0.18
MCF2L-211ENST00000413354 TKTL2Q9H0I9 626 aa16.19■□□□□ 0.18
MCF2L-211ENST00000413354 METTL5Q9NRN9 209 aaKnown RBP16.19■□□□□ 0.18
MCF2L-211ENST00000413354 TMEM59LQ9UK28 342 aa16.19■□□□□ 0.18
MCF2L-211ENST00000413354 INTS6Q9UL03 887 aaKnown RBP16.19■□□□□ 0.18
MCF2L-211ENST00000413354 VANGL2Q9ULK5 521 aa16.19■□□□□ 0.18
MCF2L-211ENST00000413354 CACNA1EQ15878 2313 aa16.19■□□□□ 0.18
MCF2L-211ENST00000413354 CNOT1A5YKK6 2376 aaKnown RBP16.19■□□□□ 0.18
MCF2L-211ENST00000413354 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-211ENST00000413354 RNASEH1O60930 286 aaKnown RBP16.18■□□□□ 0.18
MCF2L-211ENST00000413354 CLDN11O75508 207 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 CALB1P05937 261 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 C7P10643 843 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 UNGP13051 313 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-211ENST00000413354 FERP16591 822 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 ITPKAP23677 461 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 NNMTP40261 264 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 TPMTP51580 245 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 CDH4P55283 916 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 ECT2LQ008S8 904 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 SFSWAPQ12872 951 aaKnown RBP16.18■□□□□ 0.18
MCF2L-211ENST00000413354 ZNF177Q13360 481 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-211ENST00000413354 ARID5BQ14865 1188 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 DUOXA1Q1HG43 343 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 HNRNPA1L2Q32P51 320 aaKnown RBP16.18■□□□□ 0.18
MCF2L-211ENST00000413354 C2CD6Q53TS8 623 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 TRIM61Q5EBN2 209 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 WDR45BQ5MNZ6 344 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 ZNF776Q68DI1 518 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-211ENST00000413354 LRRC31Q6UY01 552 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 CIR1Q86X95 450 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-211ENST00000413354 ZNF366Q8N895 744 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 TOE1Q96GM8 510 aaKnown RBP16.18■□□□□ 0.18
MCF2L-211ENST00000413354 FUCA2Q9BTY2 467 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 NUP58Q9BVL2 599 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 SIK2Q9H0K1 926 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 PCED1AQ9H1Q7 454 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 RTN4Q9NQC3 1192 aaKnown RBP16.18■□□□□ 0.18
MCF2L-211ENST00000413354 PRSS16Q9NQE7 514 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 SEPT11Q9NVA2 429 aaKnown RBP16.18■□□□□ 0.18
MCF2L-211ENST00000413354 WSB2Q9NYS7 404 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-211ENST00000413354 SUSD2Q9UGT4 822 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 PILRBQ9UKJ0 227 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 SCML1Q9UN30 329 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 ERVW-1Q9UQF0 538 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 NUMA1Q14980 2115 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 ITIH6Q6UXX5 1313 aa16.18■□□□□ 0.18
MCF2L-211ENST00000413354 EDDM13A0A1B0GTR0 161 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 LNP1A1A4G5 178 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 TARSL2A2RTX5 802 aaKnown RBP16.17■□□□□ 0.18
MCF2L-211ENST00000413354 ADCY5O95622 1261 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 DNTTP04053 509 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 PDGFRAP16234 1089 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 TFE3P19532 575 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-211ENST00000413354 SDC4P31431 198 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 PLK1P53350 603 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 CLEC16AQ2KHT3 1053 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 C5orf22Q49AR2 442 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 PPP1R2P3Q6NXS1 205 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 LRSAM1Q6UWE0 723 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 CACUL1Q86Y37 369 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 PHF13Q86YI8 300 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-211ENST00000413354 CADM4Q8NFZ8 388 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 SLC30A5Q8TAD4 765 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 IGSF8Q969P0 613 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 MYO19Q96H55 970 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 ZNF419Q96HQ0 510 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-211ENST00000413354 MRGPRX3Q96LB0 322 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 C1orf74Q96LT6 269 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 CFAP57Q96MR6 1250 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 ADAM33Q9BZ11 813 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 CD93Q9NPY3 652 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 RXFP3Q9NSD7 469 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 ADAM22Q9P0K1 906 aa16.17■□□□□ 0.18
MCF2L-211ENST00000413354 ATXN2Q99700 1313 aaKnown RBP16.17■□□□□ 0.18
MCF2L-211ENST00000413354 A0A1W2PQC6 194 aa16.16■□□□□ 0.18
MCF2L-211ENST00000413354 FAM170AA1A519 330 aa16.16■□□□□ 0.18
MCF2L-211ENST00000413354 SYCE3A1L190 88 aa16.16■□□□□ 0.18
MCF2L-211ENST00000413354 MEI4A8MW99 385 aa16.16■□□□□ 0.18
MCF2L-211ENST00000413354 TEX33O43247 280 aa16.16■□□□□ 0.18
MCF2L-211ENST00000413354 CFIP05156 583 aa16.16■□□□□ 0.18
MCF2L-211ENST00000413354 GNSP15586 552 aa16.16■□□□□ 0.18
MCF2L-211ENST00000413354 DAB2IPQ5VWQ8 1189 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms