RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 KRT3P12035 628 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 SDC4P31431 198 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 RDXP35241 583 aaKnown RBP19.43■□□□□ 0.7
TRIM56-202ENST00000412507 PBX1P40424 430 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 CTSOP43234 321 aaPredicted RBP19.43■□□□□ 0.7
TRIM56-202ENST00000412507 DHPSP49366 369 aaPredicted RBP19.43■□□□□ 0.7
TRIM56-202ENST00000412507 NUMBP49757 651 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 COPAP53621 1224 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 CREB5Q02930 508 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 C1QBPQ07021 282 aaKnown RBP19.43■□□□□ 0.7
TRIM56-202ENST00000412507 CSRP2Q16527 193 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 PLEKHG6Q3KR16 790 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 CCDC14Q49A88 953 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 SH3PXD2AQ5TCZ1 1133 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 ACAD10Q6JQN1 1059 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 FAM131BQ86XD5 332 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 TMPRSS6Q8IU80 811 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 TMEFF1Q8IYR6 380 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 MYO19Q96H55 970 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 EDEM3Q9BZQ6 932 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 HAUS4Q9H6D7 363 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 TAS2R14Q9NYV8 317 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 AIPL1Q9NZN9 384 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 PCDHGA5Q9Y5G8 931 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.43■□□□□ 0.7
TRIM56-202ENST00000412507 IGHV1OR15-9A0A0B4J2B8 117 aa19.42■□□□□ 0.7
TRIM56-202ENST00000412507 TMCO5BA8MYB1 307 aa19.42■□□□□ 0.7
TRIM56-202ENST00000412507 ZNF217O75362 1048 aa19.42■□□□□ 0.7
TRIM56-202ENST00000412507 ASLP04424 464 aa19.42■□□□□ 0.7
TRIM56-202ENST00000412507 MZF1P28698 734 aaPredicted RBP19.42■□□□□ 0.7
TRIM56-202ENST00000412507 RFC1P35251 1148 aaPredicted RBP19.42■□□□□ 0.7
TRIM56-202ENST00000412507 MPLP40238 635 aa19.42■□□□□ 0.7
TRIM56-202ENST00000412507 CAMK2GQ13555 558 aaPredicted RBP19.42■□□□□ 0.7
TRIM56-202ENST00000412507 C5orf22Q49AR2 442 aa19.42■□□□□ 0.7
TRIM56-202ENST00000412507 FIGNQ5HY92 759 aa19.42■□□□□ 0.7
TRIM56-202ENST00000412507 WDR59Q6PJI9 974 aa19.42■□□□□ 0.7
TRIM56-202ENST00000412507 ARMCX6Q7L4S7 300 aa19.42■□□□□ 0.7
TRIM56-202ENST00000412507 LPCAT2Q7L5N7 544 aa19.42■□□□□ 0.7
TRIM56-202ENST00000412507 CACUL1Q86Y37 369 aa19.42■□□□□ 0.7
TRIM56-202ENST00000412507 C3orf20Q8ND61 904 aa19.42■□□□□ 0.7
TRIM56-202ENST00000412507 MRGPRX3Q96LB0 322 aa19.42■□□□□ 0.7
TRIM56-202ENST00000412507 SMOC1Q9H4F8 434 aa19.42■□□□□ 0.7
TRIM56-202ENST00000412507 MTG2Q9H4K7 406 aa19.42■□□□□ 0.7
TRIM56-202ENST00000412507 TMEM51Q9NW97 253 aa19.42■□□□□ 0.7
TRIM56-202ENST00000412507 IFNKQ9P0W0 207 aa19.42■□□□□ 0.7
TRIM56-202ENST00000412507 ERVW-1Q9UQF0 538 aa19.42■□□□□ 0.7
TRIM56-202ENST00000412507 LAMA1P25391 3075 aa19.41■□□□□ 0.7
TRIM56-202ENST00000412507 BCLAF3A2AJT9 711 aaKnown RBP19.41■□□□□ 0.7
TRIM56-202ENST00000412507 CNTN5O94779 1100 aa19.41■□□□□ 0.7
TRIM56-202ENST00000412507 PRKCIP41743 596 aa19.41■□□□□ 0.7
TRIM56-202ENST00000412507 PTPN9P43378 593 aa19.41■□□□□ 0.7
TRIM56-202ENST00000412507 ST8SIA6P61647 398 aa19.41■□□□□ 0.7
TRIM56-202ENST00000412507 RPL6Q02878 288 aaKnown RBP19.41■□□□□ 0.7
TRIM56-202ENST00000412507 SLC12A1Q13621 1099 aa19.41■□□□□ 0.7
TRIM56-202ENST00000412507 SF3A2Q15428 464 aaKnown RBP19.41■□□□□ 0.7
TRIM56-202ENST00000412507 ALFQ53S48 1182 aa19.41■□□□□ 0.7
TRIM56-202ENST00000412507 PLA2G2CQ5R387 149 aa19.41■□□□□ 0.7
TRIM56-202ENST00000412507 CXorf57Q6NSI4 855 aaKnown RBP19.41■□□□□ 0.7
TRIM56-202ENST00000412507 DNAJC24Q6P3W2 148 aa19.41■□□□□ 0.7
TRIM56-202ENST00000412507 PRR23CQ6ZRP0 262 aa19.41■□□□□ 0.7
TRIM56-202ENST00000412507 ZNF571Q7Z3V5 609 aaPredicted RBP19.41■□□□□ 0.7
TRIM56-202ENST00000412507 ZNF683Q8IZ20 524 aa19.41■□□□□ 0.7
TRIM56-202ENST00000412507 MCOLN2Q8IZK6 566 aa19.41■□□□□ 0.7
TRIM56-202ENST00000412507 DEFB119Q8N690 84 aa19.41■□□□□ 0.7
TRIM56-202ENST00000412507 OR2T3Q8NH03 318 aa19.41■□□□□ 0.7
TRIM56-202ENST00000412507 SIPA1Q96FS4 1042 aa19.41■□□□□ 0.7
TRIM56-202ENST00000412507 C1orf74Q96LT6 269 aa19.41■□□□□ 0.7
TRIM56-202ENST00000412507 NUP58Q9BVL2 599 aa19.41■□□□□ 0.7
TRIM56-202ENST00000412507 PRSS16Q9NQE7 514 aa19.41■□□□□ 0.7
TRIM56-202ENST00000412507 SUN2Q9UH99 717 aa19.41■□□□□ 0.7
TRIM56-202ENST00000412507 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.4■□□□□ 0.7
TRIM56-202ENST00000412507 TCRBV5S1A1TA0A578 114 aa19.4■□□□□ 0.7
TRIM56-202ENST00000412507 SIGLEC16A6NMB1 481 aa19.4■□□□□ 0.7
TRIM56-202ENST00000412507 CLDN11O75508 207 aa19.4■□□□□ 0.7
TRIM56-202ENST00000412507 SRPRAP08240 638 aaKnown RBP19.4■□□□□ 0.7
TRIM56-202ENST00000412507 ZNF806P0C7X5 589 aa19.4■□□□□ 0.7
TRIM56-202ENST00000412507 SKILP12757 684 aa19.4■□□□□ 0.7
TRIM56-202ENST00000412507 GPD1P21695 349 aa19.4■□□□□ 0.7
TRIM56-202ENST00000412507 PTGER3P43115 390 aa19.4■□□□□ 0.7
TRIM56-202ENST00000412507 CDH4P55283 916 aa19.4■□□□□ 0.7
TRIM56-202ENST00000412507 ECT2LQ008S8 904 aa19.4■□□□□ 0.7
TRIM56-202ENST00000412507 LMNB2Q03252 620 aa19.4■□□□□ 0.7
TRIM56-202ENST00000412507 KLHL30Q0D2K2 578 aa19.4■□□□□ 0.7
TRIM56-202ENST00000412507 ZNF177Q13360 481 aaPredicted RBP19.4■□□□□ 0.7
TRIM56-202ENST00000412507 NFKBIBQ15653 356 aa19.4■□□□□ 0.7
TRIM56-202ENST00000412507 LRRC31Q6UY01 552 aa19.4■□□□□ 0.7
TRIM56-202ENST00000412507 SLC36A4Q6YBV0 504 aa19.4■□□□□ 0.7
TRIM56-202ENST00000412507 CYP2U1Q7Z449 544 aa19.4■□□□□ 0.7
TRIM56-202ENST00000412507 METTL3Q86U44 580 aaKnown RBP19.4■□□□□ 0.7
TRIM56-202ENST00000412507 DNAAF5Q86Y56 855 aa19.4■□□□□ 0.7
TRIM56-202ENST00000412507 OR52K2Q8NGK3 314 aa19.4■□□□□ 0.7
TRIM56-202ENST00000412507 CENPIQ92674 756 aaPredicted RBP19.4■□□□□ 0.7
TRIM56-202ENST00000412507 PRCCQ92733 491 aaPredicted RBP19.4■□□□□ 0.7
TRIM56-202ENST00000412507 RPL10LQ96L21 214 aaKnown RBP19.4■□□□□ 0.7
TRIM56-202ENST00000412507 HAPLN3Q96S86 360 aa19.4■□□□□ 0.7
TRIM56-202ENST00000412507 TSPY26PQ9H489 355 aa19.4■□□□□ 0.7
TRIM56-202ENST00000412507 ITM2CQ9NQX7 267 aa19.4■□□□□ 0.7
TRIM56-202ENST00000412507 TP53BP1Q12888 1972 aaPredicted RBP19.39■□□□□ 0.7
TRIM56-202ENST00000412507 DRGXA6NNA5 263 aa19.39■□□□□ 0.69
TRIM56-202ENST00000412507 E9PAM4 449 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms