RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 COPZ1P61923 177 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 CDK16Q00536 496 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 UGP2Q16851 508 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 PFKFB3Q16875 520 aaPredicted RBP5.35□□□□□ -1.55
HERC4-205ENST00000412272 TOR2AQ5JU69 321 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 SLC6A19Q695T7 634 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 SHQ1Q6PI26 577 aaKnown RBP5.35□□□□□ -1.55
HERC4-205ENST00000412272 ASPGQ86U10 573 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 GPR180Q86V85 440 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.35□□□□□ -1.55
HERC4-205ENST00000412272 KBTBD3Q8NAB2 608 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 SHC3Q92529 594 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 E2F7Q96AV8 911 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 PHF21AQ96BD5 680 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 MS4A14Q96JA4 679 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 SNX18Q96RF0 628 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 EYA1Q99502 592 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 LRRC2Q9BYS8 371 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 ZMYND12Q9H0C1 365 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 RMND5AQ9H871 391 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 AGPAT5Q9NUQ2 364 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 NENFQ9UMX5 172 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 TRAF6Q9Y4K3 522 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 XDHP47989 1333 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 CCDC88AQ3V6T2 1871 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 A0A087X0B3 334 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 A0A0A6YYJ9 748 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 A0A0A6YYK5 440 aaPredicted RBP5.35□□□□□ -1.55
HERC4-205ENST00000412272 ERVV-1B6SEH8 477 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 SLCO1B7G3V0H7 640 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 H3BRJ5 948 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 C2CD2LO14523 706 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 RGS16O15492 202 aaPredicted RBP5.35□□□□□ -1.55
HERC4-205ENST00000412272 GSC2O15499 205 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 IL1BP01584 269 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 CHRM5P08912 532 aaPredicted RBP5.35□□□□□ -1.55
HERC4-205ENST00000412272 HBQ1P09105 142 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 RNF224P0DH78 156 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 SLC2A3P11169 496 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 KRT3P12035 628 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 RAG1P15918 1043 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 GABRB3P28472 473 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 HTR2BP41595 481 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 CLCNKBP51801 687 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 ITGADQ13349 1161 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 NCOA4Q13772 614 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 PPA1Q15181 289 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 TLR1Q15399 786 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 GRAMD1BQ3KR37 738 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 KIAA1324Q6UXG2 1013 aaKnown RBP5.35□□□□□ -1.55
HERC4-205ENST00000412272 DSG4Q86SJ6 1040 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 SETD3Q86TU7 594 aaPredicted RBP5.35□□□□□ -1.55
HERC4-205ENST00000412272 VSIG1Q86XK7 387 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 TMEM126BQ8IUX1 230 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 TRIM59Q8IWR1 403 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 TBC1D19Q8N5T2 526 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 RASGRP4Q8TDF6 673 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 C10orf82Q8WW14 230 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 SMG7Q92540 1137 aaKnown RBP5.35□□□□□ -1.55
HERC4-205ENST00000412272 STMN2Q93045 179 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 FUBP1Q96AE4 644 aaKnown RBP5.35□□□□□ -1.55
HERC4-205ENST00000412272 SLC22A18Q96BI1 424 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 AHCYL2Q96HN2 611 aaKnown RBP5.35□□□□□ -1.55
HERC4-205ENST00000412272 TEKT5Q96M29 485 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 ZNF560Q96MR9 790 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 ZNF578Q96N58 590 aaPredicted RBP5.35□□□□□ -1.55
HERC4-205ENST00000412272 PPP1R2P1Q96PQ5 205 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 HERPUD2Q9BSE4 406 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 BTBD10Q9BSF8 475 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 TRIM45Q9H8W5 580 aaPredicted RBP5.35□□□□□ -1.55
HERC4-205ENST00000412272 KCNK13Q9HB14 408 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 SYBUQ9NX95 663 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 DAPK2Q9UIK4 370 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 MAP3K2Q9Y2U5 619 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 MED16Q9Y2X0 877 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 PCDHGB7Q9Y5F8 929 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 SLC22A7Q9Y694 548 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 RPTORQ8N122 1335 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 TRBV23OR9-2A0A075B6M9 112 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 A8MUA0 341 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 PDHXO00330 501 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 AREL1O15033 823 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 AKAP10O43572 662 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 SYNCRIPO60506 623 aaKnown RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 NOS1APO75052 506 aaPredicted RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 FKBP6O75344 327 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 IFNA16P05015 189 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 RPS17P08708 135 aaKnown RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 ACAA1P09110 424 aaPredicted RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 NAMPTP43490 491 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 DLG4P78352 724 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 CHRNDQ07001 517 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 MGAT3Q09327 533 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 ZMYND11Q15326 602 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 TARBP2Q15633 366 aaKnown RBP5.34□□□□□ -1.55
HERC4-205ENST00000412272 SLC14A2Q15849 920 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 ESCO2Q56NI9 601 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 MDH1BQ5I0G3 518 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 C9orf131Q5VYM1 1079 aa5.34□□□□□ -1.55
HERC4-205ENST00000412272 SCARA3Q6AZY7 606 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms