RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 A0A1B0GVM2 712 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 TCAF2A6NFQ2 919 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 C3orf70A6NLC5 250 aaPredicted RBP9.03□□□□□ -0.96
LINC02539-201ENST00000411615 FAM72CH0Y354 149 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 GDF9O60383 454 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 CLDN11O75508 207 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 SRFP11831 508 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 ZFXP17010 805 aaPredicted RBP9.03□□□□□ -0.96
LINC02539-201ENST00000411615 GDI1P31150 447 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 EIF2DP41214 584 aaKnown RBP9.03□□□□□ -0.96
LINC02539-201ENST00000411615 MAPKAPK2P49137 400 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 CDH4P55283 916 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 OXCT1P55809 520 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 TPI1P60174 286 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 AMPD2Q01433 879 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 FOXC1Q12948 553 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 DPYSQ14117 519 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 DPYSL3Q14195 570 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 KRT81Q14533 505 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 LAPTM4AQ15012 233 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 CA9Q16790 459 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 SMTNL2Q2TAL5 461 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 ITPRIPL2Q3MIP1 535 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 TFDP3Q5H9I0 405 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 FAM72AQ5TYM5 149 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 FYB2Q5VWT5 728 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 PAPD7Q5XG87 772 aaKnown RBP9.03□□□□□ -0.96
LINC02539-201ENST00000411615 RAP1GAP2Q684P5 730 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 FAM72DQ6L9T8 149 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 C1orf228Q6PIY5 440 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 RHBDF2Q6PJF5 856 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 ZNF783Q6ZMS7 281 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 RFX8Q6ZV50 586 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 C14orf80Q86SX3 495 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 FAM72BQ86X60 149 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 LGI2Q8N0V4 545 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 PYROXD2Q8N2H3 581 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 CPA6Q8N4T0 437 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 LZTR1Q8N653 840 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 ALG3Q92685 438 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 IGSF8Q969P0 613 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 ASIC4Q96FT7 647 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 MSANTD3Q96H12 275 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 PRICKLE1Q96MT3 831 aaPredicted RBP9.03□□□□□ -0.96
LINC02539-201ENST00000411615 CSPG4P5Q96PW8 444 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 KCTD15Q96SI1 283 aaPredicted RBP9.03□□□□□ -0.96
LINC02539-201ENST00000411615 ZYG11BQ9C0D3 744 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 BRD9Q9H8M2 597 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 ECT2Q9H8V3 914 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 HPS4Q9NQG7 708 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 TMPRSS4Q9NRS4 437 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 TMEM248Q9NWD8 314 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 CWC15Q9P013 229 aaKnown RBP9.03□□□□□ -0.96
LINC02539-201ENST00000411615 ZNF212Q9UDV6 495 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 FBXO10Q9UK96 956 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 VANGL2Q9ULK5 521 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 NEU3Q9UQ49 428 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 C5orf42Q9H799 3197 aa9.03□□□□□ -0.96
LINC02539-201ENST00000411615 XIRP2A4UGR9 3374 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 CXorf51AA0A1B0GTR3 108 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 LRRD1A4D1F6 860 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 CTAGE9A4FU28 777 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 EEF2KO00418 725 aaKnown RBP9.02□□□□□ -0.97
LINC02539-201ENST00000411615 CREB3O43889 395 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 ZNF500O60304 480 aaPredicted RBP9.02□□□□□ -0.97
LINC02539-201ENST00000411615 CACNG3O60359 315 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 SRGAP2O75044 1071 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 KRT1P04264 644 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 CYP17A1P05093 508 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 PYGMP11217 842 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 ADH5P11766 374 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 TCP1P17987 556 aaKnown RBP9.02□□□□□ -0.97
LINC02539-201ENST00000411615 SP100P23497 879 aaPredicted RBP9.02□□□□□ -0.97
LINC02539-201ENST00000411615 HOXD9P28356 352 aaPredicted RBP9.02□□□□□ -0.97
LINC02539-201ENST00000411615 EPHB2P29323 1055 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 CDKN2BP42772 138 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 MARCKSL1P49006 195 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 NDST2P52849 883 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 YBEYP58557 167 aaPredicted RBP9.02□□□□□ -0.97
LINC02539-201ENST00000411615 SLC12A1Q13621 1099 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 TFDP2Q14188 446 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 GRM2Q14416 872 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 PREPLQ4J6C6 727 aaPredicted RBP9.02□□□□□ -0.97
LINC02539-201ENST00000411615 ANKRD20A8PQ5CZ79 823 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 PPP6R3Q5H9R7 873 aaPredicted RBP9.02□□□□□ -0.97
LINC02539-201ENST00000411615 LY6G5CQ5SRR4 150 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 ZFYVE27Q5T4F4 411 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 RFWD3Q6PCD5 774 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 MFSD7Q6UXD7 560 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 SPOCD1Q6ZMY3 1216 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 SETD3Q86TU7 594 aaPredicted RBP9.02□□□□□ -0.97
LINC02539-201ENST00000411615 NLRP14Q86W24 1093 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 TMEM25Q86YD3 366 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 CCDC117Q8IWD4 279 aaPredicted RBP9.02□□□□□ -0.97
LINC02539-201ENST00000411615 ETFBKMTQ8IXQ9 262 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 C17orf53Q8N3J3 647 aaPredicted RBP9.02□□□□□ -0.97
LINC02539-201ENST00000411615 RTL3Q8N8U3 475 aaKnown RBP9.02□□□□□ -0.97
LINC02539-201ENST00000411615 FIBINQ8TAL6 211 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 CSGALNACT1Q8TDX6 532 aa9.02□□□□□ -0.97
LINC02539-201ENST00000411615 DDI1Q8WTU0 396 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms