RNA–Protein interactions for RNA: ENST00000410940.1

RNU4-78P-201, Transcript of RNA, U4 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU4-78P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-78P-201ENST00000410940 SEL1LQ9UBV2 794 aa4.05□□□□□ -1.76
RNU4-78P-201ENST00000410940 ODF2LQ9ULJ1 636 aa4.05□□□□□ -1.76
RNU4-78P-201ENST00000410940 MRPS17Q9Y2R5 130 aaKnown RBP4.05□□□□□ -1.76
RNU4-78P-201ENST00000410940 SESN1Q9Y6P5 492 aa4.05□□□□□ -1.76
RNU4-78P-201ENST00000410940 C17orf113A0A1B0GUU1 675 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 FRMD3A2A2Y4 597 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 EIF3CLB5ME19 914 aaKnown RBP4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 FFAR3O14843 346 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 GPR42O15529 346 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 PDE8BO95263 885 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 ONECUT2O95948 504 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 MYBL1P10243 752 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 IRF1P10914 325 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 THPOP40225 353 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 PBX1P40424 430 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 DPP6P42658 865 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 CHN2P52757 468 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 MRPL12P52815 198 aaKnown RBP4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 MVDP53602 400 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 NCKAP1LP55160 1127 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 CDH8P55286 799 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 HDAC4P56524 1084 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 UBXN2AP68543 259 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 TMF1P82094 1093 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 FPGSQ05932 587 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 WASHC5Q12768 1159 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 TUBB3Q13509 450 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 MORF4L2Q15014 288 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 FAM187BQ17R55 369 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 C5orf22Q49AR2 442 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 AASDHQ4L235 1098 aaPredicted RBP4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 CC2D1BQ5T0F9 858 aaKnown RBP4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 ATG9BQ674R7 924 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 ATG14Q6ZNE5 492 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 MFSD6Q6ZSS7 791 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 CHST9Q7L1S5 443 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 PLEKHH3Q7Z736 793 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 DTX2Q86UW9 622 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 CNTROBQ8N137 903 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 CNOT9Q92600 299 aaKnown RBP4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 NPIPB3Q92617 1050 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 RMDN1Q96DB5 314 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 RNFT2Q96EX2 444 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 PGAP3Q96FM1 320 aaPredicted RBP4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 ZBTB45Q96K62 511 aaPredicted RBP4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 CFAP57Q96MR6 1250 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 SYT3Q9BQG1 590 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 C17orf80Q9BSJ5 609 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 CINPQ9BW66 212 aaPredicted RBP4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 DNAI2Q9GZS0 605 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 EPB41L4BQ9H329 900 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 OSGEPL1Q9H4B0 414 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 MROH8Q9H579 483 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 ZDHHC7Q9NXF8 308 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 PSD3Q9NYI0 1048 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 IL1RAPL1Q9NZN1 696 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 CEP72Q9P209 647 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 TRPC5Q9UL62 973 aaPredicted RBP4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 SH2B3Q9UQQ2 575 aa4.04□□□□□ -1.76
RNU4-78P-201ENST00000410940 ADAMTS20P59510 1910 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 TEX13CA0A0J9YWL9 993 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 TCRBV21S2A2A0A5A6 115 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 TMEM247A6NEH6 219 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 LRRC53A6NM62 1247 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 ZAR1LA6NP61 321 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 A8MZ25 164 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 KCNJ18B7U540 433 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 TAF4O00268 1085 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 TMPRSS11DO60235 418 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 HBP1O60381 514 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 SLU7O95391 586 aaKnown RBP4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 GPANK1O95872 356 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 URODP06132 367 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 HOXB5P09067 269 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 DLDP09622 509 aaKnown RBP4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 RARGP13631 454 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 TMEM11P17152 192 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 IGFBP2P18065 325 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 CR2P20023 1033 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 ADRA1DP25100 572 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 NTSR1P30989 418 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 HNF1BP35680 557 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 GJC1P36383 396 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 IGHMBP2P38935 993 aaKnown RBP4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 GP5P40197 560 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 LIG4P49917 911 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 ALDH3A2P51648 485 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 FOXL2P58012 376 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 SUMO2P61956 95 aaKnown RBP4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 ARHGAP8P85298 464 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 EFNB1P98172 346 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 UBXN1Q04323 297 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 CDK18Q07002 472 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 TMEM115Q12893 351 aaPredicted RBP4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 CSTF3Q12996 717 aaKnown RBP4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 BFSP2Q13515 415 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 DNASE1L3Q13609 305 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 ADIPOQQ15848 244 aa4.03□□□□□ -1.76
RNU4-78P-201ENST00000410940 ERCC6LQ2NKX8 1250 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms