RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 SERPINF2P08697 491 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 NTSP30990 170 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 RCVRNP35243 200 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 CDH8P55286 799 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 ITGA9Q13797 1035 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 CBWD6Q4V339 395 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 OR2W6PQ8NHA6 318 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 CATSPER2Q96P56 530 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 CLEC4MQ9H2X3 399 aaPredicted RBP11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 H0Y858 1186 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 WWP2O00308 870 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 TFPIP10646 304 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 NFKB1P19838 968 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 HTR1BP28222 390 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 DSG1Q02413 1049 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 TRIM16LQ309B1 348 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 PDCD10Q9BUL8 212 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 CHKBQ9Y259 395 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 H3BRB1 525 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 TPBGLP0DKB5 382 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 CXCL8P10145 99 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 OLFML2AQ68BL7 652 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 SLC47A2Q86VL8 602 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 DENND1CQ8IV53 801 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 COLGALT1Q8NBJ5 622 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 SETD6Q8TBK2 473 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 WDR24Q96S15 920 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 SPATA9Q9BWV2 254 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 ZNF638Q14966 1978 aaKnown RBP11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 EFCAB10A6NFE3 127 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 DNALI1O14645 258 aaPredicted RBP11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 TRIM3O75382 744 aaPredicted RBP11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 SGPL1O95470 568 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 WARSP23381 471 aaKnown RBP11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 CRATP43155 626 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 EPS8Q12929 822 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 NSL1Q96IY1 281 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 SLC35C2Q9NQQ7 365 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 INTS7Q9NVH2 962 aaKnown RBP11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 VAV3Q9UKW4 847 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 KLHL41O60662 606 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 MAGEA9P43362 315 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 SEC13P55735 322 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 RGS1Q08116 209 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 ERMARDQ5T6L9 678 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 TNKS2Q9H2K2 1166 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 VIPAS39Q9H9C1 493 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 MYL12BO14950 172 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 TPH1P17752 444 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 NRG3P56975 720 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 AGKQ53H12 422 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 FBXO47Q5MNV8 452 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 PRAMEF19Q5SWL8 479 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 RMND5BQ96G75 393 aaPredicted RBP11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 IRX2Q9BZI1 471 aaPredicted RBP11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 TBC1D3DA0A087WVF3 549 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 TBC1D3IA0A087WXS9 549 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 TBC1D3EA0A087X179 549 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 TBC1D3KA0A087X1G2 549 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 TBC1D3FA6NER0 549 aaPredicted RBP11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 TBC1D3LB9A6J9 549 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 TSPAN19P0C672 248 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 TBC1D3HP0C7X1 549 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 MYBL2P10244 700 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 FOSL2P15408 326 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 KBTBD12Q3ZCT8 623 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 TBC1D3GQ6DHY5 549 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 TBC1D3CQ6IPX1 549 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 KIAA0408Q6ZU52 694 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 ZC3H7AQ8IWR0 971 aaKnown RBP11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 TBC1D3Q8IZP1 549 aaPredicted RBP11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 TMEM176AQ96HP8 235 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 SEC16BQ96JE7 1060 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 COQ7Q99807 217 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 TMEM121Q9BTD3 319 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 PCDHA11Q9Y5I1 949 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 USP42Q9H9J4 1324 aaKnown RBP11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 ANO9A1A5B4 782 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 MICAL2O94851 1124 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 ITPKBP27987 946 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 ARHGDIBP52566 201 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 NAA30Q147X3 362 aaPredicted RBP11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 AP5B1Q2VPB7 878 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 SLC22A9Q8IVM8 553 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 EFCAB3Q8N7B9 438 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 TRPV3Q8NET8 790 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 DTNBP1Q96EV8 351 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 CATSPERZQ9NTU4 200 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 TOR4AQ9NXH8 423 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 TBL1XO60907 577 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 DNAJC3Q13217 504 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 EML3Q32P44 896 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 NBPF12Q5TAG4 269 aaPredicted RBP11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 PIGUQ9H490 435 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 ANKEF1Q9NU02 776 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 ARL15Q9NXU5 204 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 ZNF780BQ9Y6R6 833 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 ENO4A6NNW6 628 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms