RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 WDR27A2RRH5 827 aa17.1■□□□□ 0.33
PDK1-203ENST00000410055 CLDN5O00501 218 aa17.1■□□□□ 0.33
PDK1-203ENST00000410055 ADAM23O75077 832 aa17.1■□□□□ 0.33
PDK1-203ENST00000410055 RECQL4O94761 1208 aa17.1■□□□□ 0.33
PDK1-203ENST00000410055 APOEP02649 317 aa17.1■□□□□ 0.33
PDK1-203ENST00000410055 ALDH2P05091 517 aa17.1■□□□□ 0.33
PDK1-203ENST00000410055 ETV4P43268 484 aa17.1■□□□□ 0.33
PDK1-203ENST00000410055 CDC16Q13042 620 aa17.1■□□□□ 0.33
PDK1-203ENST00000410055 OLIG2Q13516 323 aa17.1■□□□□ 0.33
PDK1-203ENST00000410055 LGSNQ5TDP6 509 aa17.1■□□□□ 0.33
PDK1-203ENST00000410055 SLC10A4Q96EP9 437 aa17.1■□□□□ 0.33
PDK1-203ENST00000410055 PPP1R10Q96QC0 940 aaKnown RBP17.1■□□□□ 0.33
PDK1-203ENST00000410055 NFKBIZQ9BYH8 718 aa17.1■□□□□ 0.33
PDK1-203ENST00000410055 DDX43Q9NXZ2 648 aaKnown RBP17.1■□□□□ 0.33
PDK1-203ENST00000410055 GJD2Q9UKL4 321 aa17.1■□□□□ 0.33
PDK1-203ENST00000410055 DYNC1LI2O43237 492 aaPredicted RBP17.09■□□□□ 0.33
PDK1-203ENST00000410055 ENO1P06733 434 aaKnown RBP17.09■□□□□ 0.33
PDK1-203ENST00000410055 TGM2P21980 687 aa17.09■□□□□ 0.33
PDK1-203ENST00000410055 L1CAMP32004 1257 aa17.09■□□□□ 0.33
PDK1-203ENST00000410055 GNL1P36915 607 aaPredicted RBP17.09■□□□□ 0.33
PDK1-203ENST00000410055 KDSRQ06136 332 aa17.09■□□□□ 0.33
PDK1-203ENST00000410055 MARCH8Q5T0T0 291 aa17.09■□□□□ 0.33
PDK1-203ENST00000410055 OR6J1Q8NGC5 347 aa17.09■□□□□ 0.33
PDK1-203ENST00000410055 ADAM32Q8TC27 787 aa17.09■□□□□ 0.33
PDK1-203ENST00000410055 GIPC3Q8TF64 312 aa17.09■□□□□ 0.33
PDK1-203ENST00000410055 KCTD15Q96SI1 283 aaPredicted RBP17.09■□□□□ 0.33
PDK1-203ENST00000410055 HNRNPABQ99729 332 aaKnown RBP17.09■□□□□ 0.33
PDK1-203ENST00000410055 NMUR2Q9GZQ4 415 aa17.09■□□□□ 0.33
PDK1-203ENST00000410055 RNF39Q9H2S5 420 aa17.09■□□□□ 0.33
PDK1-203ENST00000410055 KCNK13Q9HB14 408 aa17.09■□□□□ 0.33
PDK1-203ENST00000410055 SSU72Q9NP77 194 aaKnown RBP17.09■□□□□ 0.33
PDK1-203ENST00000410055 FETUBQ9UGM5 382 aa17.09■□□□□ 0.33
PDK1-203ENST00000410055 PIN4Q9Y237 131 aaKnown RBP17.09■□□□□ 0.33
PDK1-203ENST00000410055 ATP6V1B1P15313 513 aa17.09■□□□□ 0.33
PDK1-203ENST00000410055 HOXA11P31270 313 aaPredicted RBP17.09■□□□□ 0.33
PDK1-203ENST00000410055 GTF2A2P52657 109 aa17.09■□□□□ 0.33
PDK1-203ENST00000410055 PPIL2Q13356 520 aa17.09■□□□□ 0.33
PDK1-203ENST00000410055 PRKD1Q15139 912 aaPredicted RBP17.09■□□□□ 0.33
PDK1-203ENST00000410055 BEST2Q8NFU1 509 aa17.09■□□□□ 0.33
PDK1-203ENST00000410055 PPTC7Q8NI37 304 aa17.09■□□□□ 0.33
PDK1-203ENST00000410055 SNX25Q9H3E2 840 aa17.09■□□□□ 0.33
PDK1-203ENST00000410055 PLAC1Q9HBJ0 212 aa17.09■□□□□ 0.33
PDK1-203ENST00000410055 ATAD3AQ9NVI7 634 aa17.09■□□□□ 0.33
PDK1-203ENST00000410055 KIAA1522Q9P206 1035 aaPredicted RBP17.09■□□□□ 0.33
PDK1-203ENST00000410055 KIAA1257Q9ULG3 409 aa17.09■□□□□ 0.33
PDK1-203ENST00000410055 SMPD1P17405 629 aa17.08■□□□□ 0.33
PDK1-203ENST00000410055 ARPC4P59998 168 aa17.08■□□□□ 0.33
PDK1-203ENST00000410055 IFNLR1Q8IU57 520 aaPredicted RBP17.08■□□□□ 0.33
PDK1-203ENST00000410055 TP53INP2Q8IXH6 220 aa17.08■□□□□ 0.33
PDK1-203ENST00000410055 E2F7Q96AV8 911 aa17.08■□□□□ 0.33
PDK1-203ENST00000410055 CSPG4P5Q96PW8 444 aa17.08■□□□□ 0.33
PDK1-203ENST00000410055 SLC4A5Q9BY07 1137 aa17.08■□□□□ 0.33
PDK1-203ENST00000410055 TUBA8Q9NY65 449 aaPredicted RBP17.08■□□□□ 0.33
PDK1-203ENST00000410055 ZNF212Q9UDV6 495 aa17.08■□□□□ 0.33
PDK1-203ENST00000410055 FAM32AQ9Y421 112 aaKnown RBP17.08■□□□□ 0.33
PDK1-203ENST00000410055 MRPL42Q9Y6G3 142 aaKnown RBP17.08■□□□□ 0.33
PDK1-203ENST00000410055 KANSL1LA0AUZ9 987 aa17.08■□□□□ 0.32
PDK1-203ENST00000410055 FCHO1O14526 889 aa17.08■□□□□ 0.32
PDK1-203ENST00000410055 GRM5P41594 1212 aa17.08■□□□□ 0.32
PDK1-203ENST00000410055 NEK2P51955 445 aa17.08■□□□□ 0.32
PDK1-203ENST00000410055 ALDH18A1P54886 795 aaKnown RBP17.08■□□□□ 0.32
PDK1-203ENST00000410055 MRPS5P82675 430 aaKnown RBP17.08■□□□□ 0.32
PDK1-203ENST00000410055 PPIDQ08752 370 aaKnown RBP17.08■□□□□ 0.32
PDK1-203ENST00000410055 SLC9A4Q6AI14 798 aa17.08■□□□□ 0.32
PDK1-203ENST00000410055 MAMDC4Q6UXC1 1216 aa17.08■□□□□ 0.32
PDK1-203ENST00000410055 CDKL3Q8IVW4 592 aaPredicted RBP17.08■□□□□ 0.32
PDK1-203ENST00000410055 BRCA1P38398 1863 aaKnown RBP17.08■□□□□ 0.32
PDK1-203ENST00000410055 SMIM31A0A1B0GVY4 71 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 UNCXA6NJT0 531 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 GSC2O15499 205 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 USP12O75317 370 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 DLDP09622 509 aaKnown RBP17.07■□□□□ 0.32
PDK1-203ENST00000410055 CDK16Q00536 496 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 SLC18A2Q05940 514 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 CTC1Q2NKJ3 1217 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 DEFB106AQ8N104 65 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 SIX5Q8N196 739 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 SREK1Q8WXA9 508 aaKnown RBP17.07■□□□□ 0.32
PDK1-203ENST00000410055 NSL1Q96IY1 281 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 GRIP2Q9C0E4 1043 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 TPK1Q9H3S4 243 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 DTLQ9NZJ0 730 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 KCNH4Q9UQ05 1017 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 BCLAF3A2AJT9 711 aaKnown RBP17.07■□□□□ 0.32
PDK1-203ENST00000410055 KCNK1O00180 336 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 RFPL1O75677 317 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 SNAI1O95863 264 aaPredicted RBP17.07■□□□□ 0.32
PDK1-203ENST00000410055 ARL4AP40617 200 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 NDUFV1P49821 464 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 SULT1E1P49888 294 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 ADIGQ0VDE8 80 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 CAMK2BQ13554 666 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 PAOXQ6QHF9 649 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 CTU1Q7Z7A3 348 aaKnown RBP17.07■□□□□ 0.32
PDK1-203ENST00000410055 RASSF3Q86WH2 238 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 SLC25A41Q8N5S1 370 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 DNAJB3Q8WWF6 145 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 SIGLEC10Q96LC7 697 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 ZNF670Q9BS34 389 aa17.07■□□□□ 0.32
PDK1-203ENST00000410055 GCOM2Q9BZD3 368 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms