RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 ANO7Q6IWH7 933 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 CEP85Q6P2H3 762 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 SLC39A5Q6ZMH5 540 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 TRIM72Q6ZMU5 477 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 UCMAQ8WVF2 138 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 STAMQ92783 540 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 HS6ST2Q96MM7 605 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 GPR78Q96P69 363 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 AGXT2Q9BYV1 514 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 TLR8Q9NR97 1041 aaKnown RBP5.64□□□□□ -1.51
LSM5-206ENST00000409987 MTMR4Q9NYA4 1195 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 TFCP2L1Q9NZI6 479 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 AASSQ9UDR5 926 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 HSF4Q9ULV5 492 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 SPATA31A1Q5TZJ5 1347 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 FAM170AA1A519 330 aa5.63□□□□□ -1.51
LSM5-206ENST00000409987 FOXN1O15353 648 aa5.63□□□□□ -1.51
LSM5-206ENST00000409987 TIPRLO75663 272 aa5.63□□□□□ -1.51
LSM5-206ENST00000409987 CYP2D6P10635 497 aa5.63□□□□□ -1.51
LSM5-206ENST00000409987 TACR2P21452 398 aa5.63□□□□□ -1.51
LSM5-206ENST00000409987 CALRP27797 417 aaKnown RBP5.63□□□□□ -1.51
LSM5-206ENST00000409987 ZBED6P86452 979 aa5.63□□□□□ -1.51
LSM5-206ENST00000409987 HOXA4Q00056 320 aaPredicted RBP5.63□□□□□ -1.51
LSM5-206ENST00000409987 THOC5Q13769 683 aaKnown RBP5.63□□□□□ -1.51
LSM5-206ENST00000409987 PUM1Q14671 1186 aaKnown RBP eCLIP5.63□□□□□ -1.51
LSM5-206ENST00000409987 KCNB1Q14721 858 aa5.63□□□□□ -1.51
LSM5-206ENST00000409987 AWAT1Q58HT5 328 aa5.63□□□□□ -1.51
LSM5-206ENST00000409987 SLC9C2Q5TAH2 1124 aa5.63□□□□□ -1.51
LSM5-206ENST00000409987 TMEM65Q6PI78 240 aa5.63□□□□□ -1.51
LSM5-206ENST00000409987 ADGRF3Q8IZF5 1079 aa5.63□□□□□ -1.51
LSM5-206ENST00000409987 TSPYL6Q8N831 410 aa5.63□□□□□ -1.51
LSM5-206ENST00000409987 ANKRD44Q8N8A2 993 aa5.63□□□□□ -1.51
LSM5-206ENST00000409987 SRFBP1Q8NEF9 429 aaKnown RBP5.63□□□□□ -1.51
LSM5-206ENST00000409987 ST8SIA4Q92187 359 aa5.63□□□□□ -1.51
LSM5-206ENST00000409987 NAP1L5Q96NT1 182 aaPredicted RBP5.63□□□□□ -1.51
LSM5-206ENST00000409987 PPP1R10Q96QC0 940 aaKnown RBP5.63□□□□□ -1.51
LSM5-206ENST00000409987 TIMP4Q99727 224 aa5.63□□□□□ -1.51
LSM5-206ENST00000409987 PRRX2Q99811 253 aa5.63□□□□□ -1.51
LSM5-206ENST00000409987 HTATIP2Q9BUP3 242 aa5.63□□□□□ -1.51
LSM5-206ENST00000409987 SLC22A11Q9NSA0 550 aa5.63□□□□□ -1.51
LSM5-206ENST00000409987 PACSIN3Q9UKS6 424 aa5.63□□□□□ -1.51
LSM5-206ENST00000409987 GPR34Q9UPC5 381 aa5.63□□□□□ -1.51
LSM5-206ENST00000409987 HS3ST3A1Q9Y663 406 aa5.63□□□□□ -1.51
LSM5-206ENST00000409987 CCDC196A0A1B0GTZ2 297 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 BICDL2A1A5D9 508 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 NPIPB13A6NJU9 1138 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 NPIPB5A8MRT5 1133 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 TTC34A8MYJ7 566 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 NPIPB4C9JG80 1138 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 H7C1Q1 480 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 PEX12O00623 359 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 DHX16O60231 1041 aaKnown RBP5.62□□□□□ -1.51
LSM5-206ENST00000409987 GCP02774 474 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 SLC3A2P08195 630 aaKnown RBP5.62□□□□□ -1.51
LSM5-206ENST00000409987 WT1P19544 449 aaPredicted RBP5.62□□□□□ -1.51
LSM5-206ENST00000409987 PROZP22891 400 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 AVPR2P30518 371 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 BUD31P41223 144 aaPredicted RBP5.62□□□□□ -1.51
LSM5-206ENST00000409987 VPS41P49754 854 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 ZNF84P51523 738 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 CACNA2D1P54289 1103 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 SHC2P98077 582 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 B4GALNT1Q00973 533 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 SLC14A1Q13336 389 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 MEA1Q16626 185 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 ERCC6LQ2NKX8 1250 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 TMEM63BQ5T3F8 832 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 ZKSCAN2Q63HK3 967 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 DENND1BQ6P3S1 775 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 TMEM88Q6PEY1 159 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 LDLRAD3Q86YD5 345 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 GALNT4Q8N4A0 578 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 RFFLQ8WZ73 363 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 NELL1Q92832 810 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 MASTLQ96GX5 879 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 ZNF845Q96IR2 970 aaPredicted RBP5.62□□□□□ -1.51
LSM5-206ENST00000409987 HIC2Q96JB3 615 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 UROC1Q96N76 676 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 PHF7Q9BWX1 381 aaPredicted RBP5.62□□□□□ -1.51
LSM5-206ENST00000409987 STN1Q9H668 368 aaKnown RBP5.62□□□□□ -1.51
LSM5-206ENST00000409987 IL21RQ9HBE5 538 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 ASNSD1Q9NWL6 643 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 SH3BP4Q9P0V3 963 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 SLC17A6Q9P2U8 582 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 SERGEFQ9UGK8 458 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 TBX20Q9UMR3 447 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 NCANO14594 1321 aa5.62□□□□□ -1.51
LSM5-206ENST00000409987 PRRG2O14669 202 aa5.61□□□□□ -1.51
LSM5-206ENST00000409987 GCATO75600 419 aa5.61□□□□□ -1.51
LSM5-206ENST00000409987 JTBO76095 146 aa5.61□□□□□ -1.51
LSM5-206ENST00000409987 ALDOCP09972 364 aaKnown RBP5.61□□□□□ -1.51
LSM5-206ENST00000409987 C6P13671 934 aa5.61□□□□□ -1.51
LSM5-206ENST00000409987 PRPH2P23942 346 aa5.61□□□□□ -1.51
LSM5-206ENST00000409987 DRG2P55039 364 aaKnown RBP5.61□□□□□ -1.51
LSM5-206ENST00000409987 DMWDQ09019 674 aa5.61□□□□□ -1.51
LSM5-206ENST00000409987 TAF11Q15544 211 aa5.61□□□□□ -1.51
LSM5-206ENST00000409987 CDC37Q16543 378 aaPredicted RBP5.61□□□□□ -1.51
LSM5-206ENST00000409987 LCE5AQ5TCM9 118 aa5.61□□□□□ -1.51
LSM5-206ENST00000409987 LIPMQ5VYY2 423 aa5.61□□□□□ -1.51
LSM5-206ENST00000409987 FAM205BPQ63HN1 556 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms