RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 DEFB106AQ8N104 65 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 RNF34Q969K3 372 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 BIRC7Q96CA5 298 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 SYNCQ9H7C4 482 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 PCDHGB2Q9Y5G2 931 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 A0A1B0GVM2 712 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 TCAF2A6NFQ2 919 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 FSBPO95073 299 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 TOP3BO95985 862 aaKnown RBP15.23■□□□□ 0.03
CBX3-203ENST00000409747 CD27P26842 260 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 BPIFB4P59827 614 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 CST6Q15828 149 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 HLA-BQ31612 363 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 LRSAM1Q6UWE0 723 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 MMS22LQ6ZRQ5 1243 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 ZDHHC17Q8IUH5 632 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 PASD1Q8IV76 773 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 DHX40Q8IX18 779 aaKnown RBP15.23■□□□□ 0.03
CBX3-203ENST00000409747 WDTC1Q8N5D0 677 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 KDF1Q8NAX2 398 aaPredicted RBP15.23■□□□□ 0.03
CBX3-203ENST00000409747 C1orf131Q8NDD1 294 aaKnown RBP15.23■□□□□ 0.03
CBX3-203ENST00000409747 CLSTN2Q9H4D0 955 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 TM9SF3Q9HD45 589 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 TM7SF3Q9NS93 570 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 FBXL12Q9NXK8 326 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 DNAJC12Q9UKB3 198 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 FZD4Q9ULV1 537 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 MSRB2Q9Y3D2 182 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 NYNRINQ9P2P1 1898 aaKnown RBP15.22■□□□□ 0.03
CBX3-203ENST00000409747 A0A1B0GVT2 93 aa15.22■□□□□ 0.03
CBX3-203ENST00000409747 FLRT2O43155 660 aa15.22■□□□□ 0.03
CBX3-203ENST00000409747 CSNK1EP49674 416 aaKnown RBP15.22■□□□□ 0.03
CBX3-203ENST00000409747 APBA1Q02410 837 aa15.22■□□□□ 0.03
CBX3-203ENST00000409747 SUZ12Q15022 739 aaKnown RBP15.22■□□□□ 0.03
CBX3-203ENST00000409747 TAF5Q15542 800 aa15.22■□□□□ 0.03
CBX3-203ENST00000409747 KIAA0895LQ68EN5 471 aa15.22■□□□□ 0.03
CBX3-203ENST00000409747 OLFML1Q6UWY5 402 aa15.22■□□□□ 0.03
CBX3-203ENST00000409747 FAM183BPQ6ZVS7 135 aa15.22■□□□□ 0.03
CBX3-203ENST00000409747 ADAT2Q7Z6V5 191 aaKnown RBP15.22■□□□□ 0.03
CBX3-203ENST00000409747 GLRX5Q86SX6 157 aa15.22■□□□□ 0.03
CBX3-203ENST00000409747 CCAR2Q8N163 923 aaKnown RBP15.22■□□□□ 0.03
CBX3-203ENST00000409747 GATA6Q92908 595 aa15.22■□□□□ 0.03
CBX3-203ENST00000409747 CAMK1GQ96NX5 476 aa15.22■□□□□ 0.03
CBX3-203ENST00000409747 PRMT1Q99873 361 aaKnown RBP15.22■□□□□ 0.03
CBX3-203ENST00000409747 OMDQ99983 421 aa15.22■□□□□ 0.03
CBX3-203ENST00000409747 TMEM121BQ9BXQ6 578 aaPredicted RBP15.22■□□□□ 0.03
CBX3-203ENST00000409747 NDST4Q9H3R1 872 aa15.22■□□□□ 0.03
CBX3-203ENST00000409747 TMEM51Q9NW97 253 aa15.22■□□□□ 0.03
CBX3-203ENST00000409747 RRN3Q9NYV6 651 aa15.22■□□□□ 0.03
CBX3-203ENST00000409747 TPX2Q9ULW0 747 aaKnown RBP15.22■□□□□ 0.03
CBX3-203ENST00000409747 APOBEC2Q9Y235 224 aaKnown RBP15.22■□□□□ 0.03
CBX3-203ENST00000409747 ZFHX4Q86UP3 3567 aa15.21■□□□□ 0.03
CBX3-203ENST00000409747 SYNJ2BP-COX16A0A087WUM0 186 aa15.21■□□□□ 0.03
CBX3-203ENST00000409747 LRRC72A6NJI9 287 aa15.21■□□□□ 0.03
CBX3-203ENST00000409747 TTC34A8MYJ7 566 aa15.21■□□□□ 0.03
CBX3-203ENST00000409747 DAB1O75553 588 aa15.21■□□□□ 0.03
CBX3-203ENST00000409747 ADH1BP00325 375 aa15.21■□□□□ 0.03
CBX3-203ENST00000409747 ERCC5P28715 1186 aaPredicted RBP15.21■□□□□ 0.03
CBX3-203ENST00000409747 FAM193AP78312 1265 aa15.21■□□□□ 0.03
CBX3-203ENST00000409747 PITX1P78337 314 aaPredicted RBP15.21■□□□□ 0.03
CBX3-203ENST00000409747 BNC1Q01954 994 aa15.21■□□□□ 0.03
CBX3-203ENST00000409747 ELAVL3Q14576 367 aaKnown RBP15.21■□□□□ 0.03
CBX3-203ENST00000409747 VWA3BQ502W6 1294 aa15.21■□□□□ 0.03
CBX3-203ENST00000409747 C9orf64Q5T6V5 341 aa15.21■□□□□ 0.03
CBX3-203ENST00000409747 OR6B2Q6IFH4 312 aa15.21■□□□□ 0.03
CBX3-203ENST00000409747 SLC26A9Q7LBE3 791 aa15.21■□□□□ 0.03
CBX3-203ENST00000409747 SETD7Q8WTS6 366 aaKnown RBP15.21■□□□□ 0.03
CBX3-203ENST00000409747 SKA1Q96BD8 255 aa15.21■□□□□ 0.03
CBX3-203ENST00000409747 TUBGCP2Q9BSJ2 902 aa15.21■□□□□ 0.03
CBX3-203ENST00000409747 MTG2Q9H4K7 406 aa15.21■□□□□ 0.03
CBX3-203ENST00000409747 IL21RQ9HBE5 538 aa15.21■□□□□ 0.03
CBX3-203ENST00000409747 SIX2Q9NPC8 291 aa15.21■□□□□ 0.03
CBX3-203ENST00000409747 COX16Q9P0S2 106 aa15.21■□□□□ 0.03
CBX3-203ENST00000409747 ADAMTS1Q9UHI8 967 aa15.21■□□□□ 0.03
CBX3-203ENST00000409747 PCOLCE2Q9UKZ9 415 aa15.21■□□□□ 0.03
CBX3-203ENST00000409747 ANKRD6Q9Y2G4 727 aa15.21■□□□□ 0.03
CBX3-203ENST00000409747 FNDC3AQ9Y2H6 1198 aaKnown RBP15.21■□□□□ 0.03
CBX3-203ENST00000409747 MID1O15344 667 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 RNASEH2AO75792 299 aaKnown RBP15.2■□□□□ 0.02
CBX3-203ENST00000409747 FTH1P19P0C7X4 201 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 NOS2P35228 1153 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 CTSOP43234 321 aaPredicted RBP15.2■□□□□ 0.02
CBX3-203ENST00000409747 PLK1P53350 603 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 SLC6A3Q01959 620 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 RAB44Q7Z6P3 723 aaPredicted RBP15.2■□□□□ 0.02
CBX3-203ENST00000409747 SLC47A2Q86VL8 602 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 MMAAQ8IVH4 418 aaKnown RBP15.2■□□□□ 0.02
CBX3-203ENST00000409747 FAM71AQ8IYT1 594 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 APCDD1Q8J025 514 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 ZNF397Q8NF99 534 aaPredicted RBP15.2■□□□□ 0.02
CBX3-203ENST00000409747 OR2T34Q8NGX1 318 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 IGSF8Q969P0 613 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 RPRD1AQ96P16 312 aaPredicted RBP15.2■□□□□ 0.02
CBX3-203ENST00000409747 CDC6Q99741 560 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 PDCL3Q9H2J4 239 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 KLK13Q9UKR3 277 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 PAXBP1Q9Y5B6 917 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 WDFY3Q8IZQ1 3526 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 NUMA1Q14980 2115 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 A0A1W2PP55 124 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms