RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 ARHGAP36Q6ZRI8 547 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 TMC3Q7Z5M5 1100 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 ZNF683Q8IZ20 524 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 RTL3Q8N8U3 475 aaKnown RBP12.8□□□□□ -0.36
CHMP3-204ENST00000409727 UBLCP1Q8WVY7 318 aaPredicted RBP12.8□□□□□ -0.36
CHMP3-204ENST00000409727 PLD4Q96BZ4 506 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 PRMT1Q99873 361 aaKnown RBP12.8□□□□□ -0.36
CHMP3-204ENST00000409727 SMG9Q9H0W8 520 aaKnown RBP12.8□□□□□ -0.36
CHMP3-204ENST00000409727 RAB6BQ9NRW1 208 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 HPCAL4Q9UM19 191 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 HCFC2Q9Y5Z7 792 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 CPQQ9Y646 472 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 ANAPC1Q9H1A4 1944 aa12.8□□□□□ -0.36
CHMP3-204ENST00000409727 RNF103O00237 685 aa12.79□□□□□ -0.36
CHMP3-204ENST00000409727 CDC25CP30307 473 aa12.79□□□□□ -0.36
CHMP3-204ENST00000409727 HTR7P34969 479 aa12.79□□□□□ -0.36
CHMP3-204ENST00000409727 GARSP41250 739 aaKnown RBP12.79□□□□□ -0.36
CHMP3-204ENST00000409727 NTHL1P78549 312 aa12.79□□□□□ -0.36
CHMP3-204ENST00000409727 ZXDBP98169 803 aa12.79□□□□□ -0.36
CHMP3-204ENST00000409727 NRG1Q02297 640 aaPredicted RBP12.79□□□□□ -0.36
CHMP3-204ENST00000409727 GAD2Q05329 585 aa12.79□□□□□ -0.36
CHMP3-204ENST00000409727 GALNT2Q10471 571 aa12.79□□□□□ -0.36
CHMP3-204ENST00000409727 FAM133BQ5BKY9 247 aaKnown RBP12.79□□□□□ -0.36
CHMP3-204ENST00000409727 RNASEH2BQ5TBB1 312 aaKnown RBP12.79□□□□□ -0.36
CHMP3-204ENST00000409727 ANKRD22Q5VYY1 191 aa12.79□□□□□ -0.36
CHMP3-204ENST00000409727 ARHGEF18Q6ZSZ5 1173 aa12.79□□□□□ -0.36
CHMP3-204ENST00000409727 CPT1BQ92523 772 aa12.79□□□□□ -0.36
CHMP3-204ENST00000409727 TCEAL4Q96EI5 215 aa12.79□□□□□ -0.36
CHMP3-204ENST00000409727 ZFRQ96KR1 1074 aaKnown RBP12.79□□□□□ -0.36
CHMP3-204ENST00000409727 SLC39A8Q9C0K1 460 aa12.79□□□□□ -0.36
CHMP3-204ENST00000409727 KLC2Q9H0B6 622 aa12.79□□□□□ -0.36
CHMP3-204ENST00000409727 TLE6Q9H808 572 aa12.79□□□□□ -0.36
CHMP3-204ENST00000409727 PAK5Q9P286 719 aa12.79□□□□□ -0.36
CHMP3-204ENST00000409727 DNMT3BQ9UBC3 853 aaKnown RBP12.79□□□□□ -0.36
CHMP3-204ENST00000409727 AGO1Q9UL18 857 aaKnown RBP12.79□□□□□ -0.36
CHMP3-204ENST00000409727 CHD9Q3L8U1 2897 aa12.79□□□□□ -0.36
CHMP3-204ENST00000409727 TCRBV7S3A2A0A539 114 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 MAP2K7O14733 419 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 TSPAN3O60637 253 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 MX2P20592 715 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 HSPA9P38646 679 aaKnown RBP12.78□□□□□ -0.36
CHMP3-204ENST00000409727 NRIP1P48552 1158 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 CAV1Q03135 178 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 RAB30Q15771 203 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 HP1BP3Q5SSJ5 553 aaPredicted RBP12.78□□□□□ -0.36
CHMP3-204ENST00000409727 PDE12Q6L8Q7 609 aaKnown RBP12.78□□□□□ -0.36
CHMP3-204ENST00000409727 RHBDF2Q6PJF5 856 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 NLRP14Q86W24 1093 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 ZNF354CQ86Y25 554 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 ARHGAP12Q8IWW6 846 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 PPIL6Q8IXY8 311 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 ATPAF2Q8N5M1 289 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.78□□□□□ -0.36
CHMP3-204ENST00000409727 RTP4Q96DX8 246 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 FERMT1Q9BQL6 677 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 ZFP37Q9Y6Q3 630 aaPredicted RBP12.78□□□□□ -0.36
CHMP3-204ENST00000409727 OBSL1O75147 1896 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 TRAV19A0A0A6YYK7 116 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 CCDC195A0A1B0GUA6 201 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 NCAM2O15394 837 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 STK10O94804 968 aaKnown RBP12.78□□□□□ -0.36
CHMP3-204ENST00000409727 METTL18O95568 372 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 RHOP08100 348 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 RHOQP17081 205 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 PTPN2P17706 415 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 HSD17B3P37058 310 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 SGSHP51688 502 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 PPIDQ08752 370 aaKnown RBP12.78□□□□□ -0.36
CHMP3-204ENST00000409727 MORF4L2Q15014 288 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 TEAD2Q15562 447 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 SLC5A9Q2M3M2 681 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 ANKRD20A2Q5SQ80 823 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 UBAP2Q5T6F2 1119 aaKnown RBP12.78□□□□□ -0.36
CHMP3-204ENST00000409727 GPR158Q5T848 1215 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 ANKRD20A1Q5TYW2 823 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 ANKRD20A3Q5VUR7 823 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 GRASPQ7Z6J2 395 aaPredicted RBP12.78□□□□□ -0.36
CHMP3-204ENST00000409727 C12orf76Q8N812 135 aaPredicted RBP12.78□□□□□ -0.36
CHMP3-204ENST00000409727 SHKBP1Q8TBC3 707 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 USP33Q8TEY7 942 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 PRCCQ92733 491 aaPredicted RBP12.78□□□□□ -0.36
CHMP3-204ENST00000409727 HDAC11Q96DB2 347 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 SLC46A2Q9BY10 475 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 ETNK1Q9HBU6 452 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 PPARGC1AQ9UBK2 798 aaKnown RBP12.78□□□□□ -0.36
CHMP3-204ENST00000409727 FARP1Q9Y4F1 1045 aaPredicted RBP12.78□□□□□ -0.36
CHMP3-204ENST00000409727 RAD54BQ9Y620 910 aa12.78□□□□□ -0.36
CHMP3-204ENST00000409727 NUP205Q92621 2012 aa12.77□□□□□ -0.36
CHMP3-204ENST00000409727 IGLV3-10A0A075B6K4 115 aa12.77□□□□□ -0.37
CHMP3-204ENST00000409727 A0A0A0MRY4 1105 aa12.77□□□□□ -0.37
CHMP3-204ENST00000409727 C5orf60A6NFR6 353 aa12.77□□□□□ -0.37
CHMP3-204ENST00000409727 PPFIA2O75334 1257 aa12.77□□□□□ -0.37
CHMP3-204ENST00000409727 GCATO75600 419 aa12.77□□□□□ -0.37
CHMP3-204ENST00000409727 TMEM63AO94886 807 aa12.77□□□□□ -0.37
CHMP3-204ENST00000409727 OLFM2O95897 454 aa12.77□□□□□ -0.37
CHMP3-204ENST00000409727 OR1E1P30953 314 aa12.77□□□□□ -0.37
CHMP3-204ENST00000409727 PAPOLAP51003 745 aaKnown RBP12.77□□□□□ -0.37
CHMP3-204ENST00000409727 PMS2P54278 862 aa12.77□□□□□ -0.37
CHMP3-204ENST00000409727 RPS24P62847 133 aaKnown RBP12.77□□□□□ -0.37
CHMP3-204ENST00000409727 WASHC5Q12768 1159 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms