RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TMEM199Q8N511 208 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 SAMD3Q8N6K7 520 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 RSC1A1Q92681 617 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 C3orf49Q96BT1 292 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 VCPIP1Q96JH7 1222 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 FAM234AQ9H0X4 552 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 FBXO4Q9UKT5 387 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 DAPP1Q9UN19 280 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 LAMP3Q9UQV4 416 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 TNFSF13BQ9Y275 285 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 CYP3A7-CYP3A51PA0A087WV96 503 aa4.59□□□□□ -1.67
PMS1-203ENST00000409593 A0A0G2JK05 382 aa4.59□□□□□ -1.67
PMS1-203ENST00000409593 MBD3L5A6NJ08 208 aaPredicted RBP4.59□□□□□ -1.67
PMS1-203ENST00000409593 MSI1O43347 362 aaKnown RBP4.59□□□□□ -1.67
PMS1-203ENST00000409593 CSTBP04080 98 aaKnown RBP4.59□□□□□ -1.67
PMS1-203ENST00000409593 CYP3A7P24462 503 aa4.59□□□□□ -1.67
PMS1-203ENST00000409593 RCAN1P53805 252 aa4.59□□□□□ -1.67
PMS1-203ENST00000409593 TWIST1Q15672 202 aa4.59□□□□□ -1.67
PMS1-203ENST00000409593 CCDC38Q502W7 563 aa4.59□□□□□ -1.67
PMS1-203ENST00000409593 C10orf76Q5T2E6 689 aa4.59□□□□□ -1.67
PMS1-203ENST00000409593 ISM2Q6H9L7 571 aa4.59□□□□□ -1.67
PMS1-203ENST00000409593 SCAMP5Q8TAC9 235 aa4.59□□□□□ -1.67
PMS1-203ENST00000409593 NSMCE1Q8WV22 266 aa4.59□□□□□ -1.67
PMS1-203ENST00000409593 CPT1BQ92523 772 aa4.59□□□□□ -1.67
PMS1-203ENST00000409593 EID2BQ96D98 161 aa4.59□□□□□ -1.67
PMS1-203ENST00000409593 LTV1Q96GA3 475 aaPredicted RBP4.59□□□□□ -1.67
PMS1-203ENST00000409593 MLXIPQ9HAP2 919 aa4.59□□□□□ -1.67
PMS1-203ENST00000409593 PCDHA12Q9UN75 941 aa4.59□□□□□ -1.67
PMS1-203ENST00000409593 C19orf53Q9UNZ5 99 aaPredicted RBP4.59□□□□□ -1.67
PMS1-203ENST00000409593 PCDHA10Q9Y5I2 948 aa4.59□□□□□ -1.67
PMS1-203ENST00000409593 A6NNC1 897 aa4.58□□□□□ -1.68
PMS1-203ENST00000409593 NTN1O95631 604 aa4.58□□□□□ -1.68
PMS1-203ENST00000409593 CRYABP02511 175 aaKnown RBP4.58□□□□□ -1.68
PMS1-203ENST00000409593 WNT1P04628 370 aa4.58□□□□□ -1.68
PMS1-203ENST00000409593 CHRNB1P11230 501 aa4.58□□□□□ -1.68
PMS1-203ENST00000409593 POLE2P56282 527 aa4.58□□□□□ -1.68
PMS1-203ENST00000409593 FHL1Q13642 323 aa4.58□□□□□ -1.68
PMS1-203ENST00000409593 HMBOX1Q6NT76 420 aa4.58□□□□□ -1.68
PMS1-203ENST00000409593 SYNE3Q6ZMZ3 975 aa4.58□□□□□ -1.68
PMS1-203ENST00000409593 TRAPPC11Q7Z392 1133 aa4.58□□□□□ -1.68
PMS1-203ENST00000409593 MDGA2Q7Z553 956 aa4.58□□□□□ -1.68
PMS1-203ENST00000409593 IP6K1Q92551 441 aa4.58□□□□□ -1.68
PMS1-203ENST00000409593 KAT2AQ92830 837 aa4.58□□□□□ -1.68
PMS1-203ENST00000409593 ATP2A3Q93084 1043 aa4.58□□□□□ -1.68
PMS1-203ENST00000409593 ZNF419Q96HQ0 510 aaPredicted RBP4.58□□□□□ -1.68
PMS1-203ENST00000409593 PABPC3Q9H361 631 aaKnown RBP4.58□□□□□ -1.68
PMS1-203ENST00000409593 PRDM8Q9NQV8 689 aa4.58□□□□□ -1.68
PMS1-203ENST00000409593 LZTS1Q9Y250 596 aa4.58□□□□□ -1.68
PMS1-203ENST00000409593 TTC3P53804 2025 aa4.58□□□□□ -1.68
PMS1-203ENST00000409593 CD8B2A6NJW9 211 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 MCIDASD6RGH6 385 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 HEXIM1O94992 359 aaKnown RBP4.57□□□□□ -1.68
PMS1-203ENST00000409593 TNFRSF1BP20333 461 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 SERPINA4P29622 427 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 PCP4P48539 62 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 RHBDL3P58872 404 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 PPATQ06203 517 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 LEXMQ3ZCV2 418 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 GALNTL6Q49A17 601 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 NUGGCQ68CJ6 796 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 KIAA1324Q6UXG2 1013 aaKnown RBP4.57□□□□□ -1.68
PMS1-203ENST00000409593 RRAGAQ7L523 313 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 CENPIQ92674 756 aaPredicted RBP4.57□□□□□ -1.68
PMS1-203ENST00000409593 SLC39A13Q96H72 371 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 CLMNQ96JQ2 1002 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 PDE11AQ9HCR9 933 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 ARL15Q9NXU5 204 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 SLC25A13Q9UJS0 675 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 FAM90A10PA6NDY2 464 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 HMX3A6NHT5 357 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 EPN2O95208 641 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 PNLIPRP1P54315 467 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 PMPCAQ10713 525 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 OS9Q13438 667 aaPredicted RBP4.57□□□□□ -1.68
PMS1-203ENST00000409593 MORC3Q14149 939 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 TIGD6Q17RP2 521 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 TBRG1Q3YBR2 411 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 PIK3CD-AS1Q5SR53 167 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 TTC22Q5TAA0 569 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 DAB2IPQ5VWQ8 1189 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 CCDC174Q6PII3 467 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 RTL10Q7L3V2 364 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 KLBQ86Z14 1044 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 EXD3Q8N9H8 876 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 C9orf106Q8NAJ2 232 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 NAF1Q96HR8 494 aaKnown RBP4.57□□□□□ -1.68
PMS1-203ENST00000409593 WDR83Q9BRX9 315 aaKnown RBP4.57□□□□□ -1.68
PMS1-203ENST00000409593 WACQ9BTA9 647 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 EBF3Q9H4W6 596 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 TXNRD2Q9NNW7 524 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 BAG5Q9UL15 447 aa4.57□□□□□ -1.68
PMS1-203ENST00000409593 FOXO6A8MYZ6 492 aa4.56□□□□□ -1.68
PMS1-203ENST00000409593 GRM8O00222 908 aa4.56□□□□□ -1.68
PMS1-203ENST00000409593 TOMM40O96008 361 aa4.56□□□□□ -1.68
PMS1-203ENST00000409593 SNHG28P0DPA3 235 aa4.56□□□□□ -1.68
PMS1-203ENST00000409593 LINC00205P59089 165 aa4.56□□□□□ -1.68
PMS1-203ENST00000409593 PDCLQ13371 301 aa4.56□□□□□ -1.68
PMS1-203ENST00000409593 PTGR1Q14914 329 aa4.56□□□□□ -1.68
PMS1-203ENST00000409593 ALG10Q5BKT4 473 aa4.56□□□□□ -1.68
PMS1-203ENST00000409593 ALG10BQ5I7T1 473 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms