RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 SCML2Q9UQR0 700 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 JRKLQ9Y4A0 524 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 GOLGA4Q13439 2230 aaKnown RBP13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 SETXQ7Z333 2677 aaKnown RBP13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 TMEM131Q92545 1883 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 TRABD2BA6NFA1 517 aa13.24□□□□□ -0.29
CHRNA1-205ENST00000409542 KCNK3O14649 394 aa13.24□□□□□ -0.29
CHRNA1-205ENST00000409542 PENKP01210 267 aaPredicted RBP13.24□□□□□ -0.29
CHRNA1-205ENST00000409542 NR2F2P24468 414 aa13.24□□□□□ -0.29
CHRNA1-205ENST00000409542 PRKCHP24723 683 aa13.24□□□□□ -0.29
CHRNA1-205ENST00000409542 RPL13P26373 211 aaKnown RBP13.24□□□□□ -0.29
CHRNA1-205ENST00000409542 CSNK1EP49674 416 aaKnown RBP13.24□□□□□ -0.29
CHRNA1-205ENST00000409542 ZNF234Q14588 700 aa13.24□□□□□ -0.29
CHRNA1-205ENST00000409542 TMEM215Q68D42 235 aa13.24□□□□□ -0.29
CHRNA1-205ENST00000409542 ZNF572Q7Z3I7 529 aaPredicted RBP13.24□□□□□ -0.29
CHRNA1-205ENST00000409542 SIPA1Q96FS4 1042 aa13.24□□□□□ -0.29
CHRNA1-205ENST00000409542 PIWIL1Q96J94 861 aaKnown RBP13.24□□□□□ -0.29
CHRNA1-205ENST00000409542 ALS2CR12Q96Q35 445 aa13.24□□□□□ -0.29
CHRNA1-205ENST00000409542 LUC7LQ9NQ29 371 aaKnown RBP13.24□□□□□ -0.29
CHRNA1-205ENST00000409542 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.24□□□□□ -0.29
CHRNA1-205ENST00000409542 AIPL1Q9NZN9 384 aa13.24□□□□□ -0.29
CHRNA1-205ENST00000409542 TFR2Q9UP52 801 aa13.24□□□□□ -0.29
CHRNA1-205ENST00000409542 SLC27A6Q9Y2P4 619 aa13.24□□□□□ -0.29
CHRNA1-205ENST00000409542 CABIN1Q9Y6J0 2220 aa13.24□□□□□ -0.29
CHRNA1-205ENST00000409542 CKAP5Q14008 2032 aa13.24□□□□□ -0.29
CHRNA1-205ENST00000409542 TARSL2A2RTX5 802 aaKnown RBP13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 ENC1O14682 589 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 MAP2K7O14733 419 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 EXOC3O60645 756 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 SASH3O75995 380 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 CLSTN1O94985 981 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 HMBSP08397 361 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 ZNF883P0CG24 379 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 MCM3P25205 808 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 MAGEA1P43355 309 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 CLDN10P78369 228 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 STARD3Q14849 445 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 KCNT1Q5JUK3 1230 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 C10orf120Q5SQS8 335 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 BEND6Q5SZJ8 279 aaPredicted RBP13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 LAYNQ6UX15 382 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 FAM124AQ86V42 546 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 C12orf56Q8IXR9 622 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 RNF10Q8N5U6 811 aaKnown RBP13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 NOA1Q8NC60 698 aaKnown RBP13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 SCUBE2Q9NQ36 999 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 DKK4Q9UBT3 224 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 ARMCX3Q9UH62 379 aaPredicted RBP13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 DNMT3LQ9UJW3 386 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 SNX11Q9Y5W9 270 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 MACROD2A1Z1Q3 448 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 CER1O95813 267 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 AFPP02771 609 aaKnown RBP13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 PRB1P04280 392 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 FAM200BP0CF97 657 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 ASPAP45381 313 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 POLR2FP61218 127 aaKnown RBP13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 SNRPFP62306 86 aaKnown RBP13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 KCNH2Q12809 1159 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 TERF2Q15554 542 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 KIF19Q2TAC6 998 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 DPY19L2P1Q6NXN4 242 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 KLHDC10Q6PID8 442 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 PRCCQ92733 491 aaPredicted RBP13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 HNRNPABQ99729 332 aaKnown RBP13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 C6orf106Q9H6K1 298 aaPredicted RBP13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 NAGPAQ9UK23 515 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 SNX12Q9UMY4 172 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 DUSP10Q9Y6W6 482 aa13.23□□□□□ -0.29
CHRNA1-205ENST00000409542 GTPBP10A4D1E9 387 aaKnown RBP13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 IGLV3-19P01714 112 aa13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 NR3C1P04150 777 aa13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 RHOXF2BP0C7M4 288 aa13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 EPB41P11171 864 aaKnown RBP13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 HLA-EP13747 358 aa13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 OXTRP30559 389 aa13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 ACSL1P33121 698 aa13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 VSNL1P62760 191 aa13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 ASIC2Q16515 512 aa13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 TDRD12Q587J7 1177 aaKnown RBP13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 C1orf220Q5T0J3 134 aa13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 HDXQ7Z353 690 aa13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 ADAM32Q8TC27 787 aa13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 CYFIP2Q96F07 1278 aa13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 RHOXF2Q9BQY4 288 aa13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 NLRC4Q9NPP4 1024 aa13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 DMAC2Q9NW81 257 aa13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 ELOVL2Q9NXB9 296 aa13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 RASAL2Q9UJF2 1139 aa13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 AGO1Q9UL18 857 aaKnown RBP13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 HYOU1Q9Y4L1 999 aa13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 PCDHGB2Q9Y5G2 931 aa13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 CAPN6Q9Y6Q1 641 aa13.22□□□□□ -0.29
CHRNA1-205ENST00000409542 FLRT2O43155 660 aa13.21□□□□□ -0.3
CHRNA1-205ENST00000409542 SYNCRIPO60506 623 aaKnown RBP13.21□□□□□ -0.3
CHRNA1-205ENST00000409542 MOCS3O95396 460 aa13.21□□□□□ -0.3
CHRNA1-205ENST00000409542 EPHX1P07099 455 aa13.21□□□□□ -0.3
CHRNA1-205ENST00000409542 TCP1P17987 556 aaKnown RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms