RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 SERPINB6P35237 376 aa17.31■□□□□ 0.36
SSB-202ENST00000409333 PTGIRP43119 386 aa17.31■□□□□ 0.36
SSB-202ENST00000409333 NR2C2P49116 596 aa17.31■□□□□ 0.36
SSB-202ENST00000409333 DR1Q01658 176 aa17.31■□□□□ 0.36
SSB-202ENST00000409333 FAM78AQ5JUQ0 283 aa17.31■□□□□ 0.36
SSB-202ENST00000409333 MYLIPQ8WY64 445 aa17.31■□□□□ 0.36
SSB-202ENST00000409333 UBXN4Q92575 508 aa17.31■□□□□ 0.36
SSB-202ENST00000409333 NKD2Q969F2 451 aaPredicted RBP17.31■□□□□ 0.36
SSB-202ENST00000409333 RSPRY1Q96DX4 576 aa17.31■□□□□ 0.36
SSB-202ENST00000409333 DDX50Q9BQ39 737 aaKnown RBP17.31■□□□□ 0.36
SSB-202ENST00000409333 TMEM121Q9BTD3 319 aa17.31■□□□□ 0.36
SSB-202ENST00000409333 FRMD8P1Q9BZ68 369 aaPredicted RBP17.31■□□□□ 0.36
SSB-202ENST00000409333 TMEM248Q9NWD8 314 aa17.31■□□□□ 0.36
SSB-202ENST00000409333 ZNF510Q9Y2H8 683 aa17.31■□□□□ 0.36
SSB-202ENST00000409333 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.3■□□□□ 0.36
SSB-202ENST00000409333 CTIFO43310 598 aaKnown RBP17.3■□□□□ 0.36
SSB-202ENST00000409333 SLC7A5Q01650 507 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 RABGAP1LQ5R372 815 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 ST13P5Q8NFI4 369 aaPredicted RBP17.3■□□□□ 0.36
SSB-202ENST00000409333 P2RY11Q96G91 374 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 ASB16Q96NS5 453 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 LRRC3BQ96PB8 259 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 HINFPQ9BQA5 517 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 ZNF148Q9UQR1 794 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 UNC80Q8N2C7 3258 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 H7C0C1 242 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 GFRA2O00451 464 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 TCF3P15923 654 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 WEE1P30291 646 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 VIPR2P41587 438 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 ATP5OP48047 213 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 DHX34Q14147 1143 aaKnown RBP17.3■□□□□ 0.36
SSB-202ENST00000409333 CCDC85BQ15834 202 aaPredicted RBP17.3■□□□□ 0.36
SSB-202ENST00000409333 FAM182AQ5T1J6 154 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 ARHGAP12Q8IWW6 846 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 CELF5Q8N6W0 485 aaKnown RBP17.3■□□□□ 0.36
SSB-202ENST00000409333 SMRP1Q8NCR6 262 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 ATL2Q8NHH9 583 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 CCDC26Q8TAB7 109 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 SMARCD2Q92925 531 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 RIPOR3Q96MK2 946 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 CDX2Q99626 313 aaPredicted RBP17.3■□□□□ 0.36
SSB-202ENST00000409333 TRIM51Q9BSJ1 452 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 POMKQ9H5K3 350 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 NOL6Q9H6R4 1146 aaKnown RBP17.3■□□□□ 0.36
SSB-202ENST00000409333 GDE1Q9NZC3 331 aa17.3■□□□□ 0.36
SSB-202ENST00000409333 ITGAVP06756 1048 aa17.29■□□□□ 0.36
SSB-202ENST00000409333 GDF10P55107 478 aa17.29■□□□□ 0.36
SSB-202ENST00000409333 DARS2Q6PI48 645 aaKnown RBP17.29■□□□□ 0.36
SSB-202ENST00000409333 PRUNE1Q86TP1 453 aa17.29■□□□□ 0.36
SSB-202ENST00000409333 JAMLQ86YT9 394 aa17.29■□□□□ 0.36
SSB-202ENST00000409333 CPXM2Q8N436 756 aa17.29■□□□□ 0.36
SSB-202ENST00000409333 TDRD5Q8NAT2 981 aaKnown RBP17.29■□□□□ 0.36
SSB-202ENST00000409333 SLCO2A1Q92959 643 aa17.29■□□□□ 0.36
SSB-202ENST00000409333 RUNDC3BQ96NL0 473 aa17.29■□□□□ 0.36
SSB-202ENST00000409333 MYADMQ96S97 322 aa17.29■□□□□ 0.36
SSB-202ENST00000409333 LGMNQ99538 433 aa17.29■□□□□ 0.36
SSB-202ENST00000409333 SLC39A8Q9C0K1 460 aa17.29■□□□□ 0.36
SSB-202ENST00000409333 ANKZF1Q9H8Y5 726 aa17.29■□□□□ 0.36
SSB-202ENST00000409333 KIF9Q9HAQ2 790 aa17.29■□□□□ 0.36
SSB-202ENST00000409333 DMGDHQ9UI17 866 aaKnown RBP17.29■□□□□ 0.36
SSB-202ENST00000409333 CDH7Q9ULB5 785 aa17.29■□□□□ 0.36
SSB-202ENST00000409333 DRG1Q9Y295 367 aaKnown RBP17.29■□□□□ 0.36
SSB-202ENST00000409333 COL4A3Q01955 1670 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 ZSCAN5CA6NGD5 496 aaPredicted RBP17.28■□□□□ 0.36
SSB-202ENST00000409333 H3BQ06 376 aaPredicted RBP17.28■□□□□ 0.36
SSB-202ENST00000409333 ECEL1O95672 775 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 CHKAP35790 457 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 CDH4P55283 916 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 GALNT2Q10471 571 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 XRCC4Q13426 336 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 ELF2Q15723 593 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 GLE1Q53GS7 698 aaKnown RBP17.28■□□□□ 0.36
SSB-202ENST00000409333 AFMIDQ63HM1 303 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 TPGS1Q6ZTW0 290 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 BZW1Q7L1Q6 419 aaKnown RBP17.28■□□□□ 0.36
SSB-202ENST00000409333 MAATS1Q7Z4T9 603 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 LZTR1Q8N653 840 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 ALLCQ8N6M5 410 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 GLIS1Q8NBF1 620 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 GRK7Q8WTQ7 553 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 BHMTQ93088 406 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 QKIQ96PU8 341 aaKnown RBP eCLIP17.28■□□□□ 0.361e-6■■□□□ 13.1
SSB-202ENST00000409333 RAD54BQ9Y620 910 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 A0A1B0GVM2 712 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 TCAF2A6NFQ2 919 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 SGK1O00141 431 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 DFFAO00273 331 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 TBL1XO60907 577 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 HEXIM1O94992 359 aaKnown RBP17.28■□□□□ 0.36
SSB-202ENST00000409333 VAV1P15498 845 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 FCARP24071 287 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 RBL1P28749 1068 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 OR1E1P30953 314 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 MTHFRP42898 656 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 NRLP54845 237 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 PDK1Q15118 436 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 SLC45A4Q5BKX6 768 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 CCDC70Q6NSX1 233 aa17.28■□□□□ 0.36
SSB-202ENST00000409333 ARHGAP36Q6ZRI8 547 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms