RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 DCPSQ96C86 337 aaKnown RBP10.1□□□□□ -0.79
MSH2-202ENST00000406134 HSFY1Q96LI6 401 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 FAM161BQ96MY7 647 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 C1QTNF1Q9BXJ1 281 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 TRIM6Q9C030 488 aaPredicted RBP10.1□□□□□ -0.79
MSH2-202ENST00000406134 PIDD1Q9HB75 910 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 ZNF212Q9UDV6 495 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 TBC1D30Q9Y2I9 924 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 GREB1Q4ZG55 1949 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 NRCAMQ92823 1304 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 E2F8A0AVK6 867 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 I3L4J1 428 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 GNL1P36915 607 aaPredicted RBP10.1□□□□□ -0.79
MSH2-202ENST00000406134 SULT1E1P49888 294 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 AFF1P51825 1210 aaKnown RBP10.1□□□□□ -0.79
MSH2-202ENST00000406134 SLC25A3Q00325 362 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 ZBTB16Q05516 673 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 R3HDM1Q15032 1099 aaKnown RBP10.1□□□□□ -0.79
MSH2-202ENST00000406134 DLG2Q15700 870 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 SPNS2Q8IVW8 549 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 B3GALNT2Q8NCR0 500 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 ATP2A3Q93084 1043 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 LENG1Q96BZ8 264 aaPredicted RBP10.1□□□□□ -0.79
MSH2-202ENST00000406134 MAML3Q96JK9 1138 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 HNRNPABQ99729 332 aaKnown RBP10.1□□□□□ -0.79
MSH2-202ENST00000406134 APOL6Q9BWW8 343 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 DUSP16Q9BY84 665 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 CRTAC1Q9NQ79 661 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 SNX15Q9NRS6 342 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 DNAJC28Q9NX36 388 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 STOML1Q9UBI4 398 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 OPHN1O60890 802 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 LUC7L3O95232 432 aaKnown RBP10.09□□□□□ -0.79
MSH2-202ENST00000406134 WARSP23381 471 aaKnown RBP10.09□□□□□ -0.79
MSH2-202ENST00000406134 LILRA4P59901 499 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 GRB14Q14449 540 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 CRLF3Q8IUI8 442 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 PSTKQ8IV42 348 aaKnown RBP10.09□□□□□ -0.79
MSH2-202ENST00000406134 TRIM42Q8IWZ5 723 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 POU5F2Q8N7G0 328 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 OR52K1Q8NGK4 314 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 RBBP8Q99708 897 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 IQCGQ9H095 443 aaKnown RBP10.09□□□□□ -0.79
MSH2-202ENST00000406134 CASS4Q9NQ75 786 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 TTC3P53804 2025 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 EME2A4GXA9 379 aaPredicted RBP10.09□□□□□ -0.79
MSH2-202ENST00000406134 H3BNX3 289 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 GLRA3O75311 464 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 USP12O75317 370 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 F2P00734 622 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 SMIM10L2AP0DMW4 78 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 SMIM10L2BP0DMW5 78 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 ACAT1P24752 427 aaKnown RBP10.09□□□□□ -0.79
MSH2-202ENST00000406134 CRABP2P29373 138 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 MSLNQ13421 630 aaPredicted RBP10.09□□□□□ -0.79
MSH2-202ENST00000406134 RCN2Q14257 317 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 TNS4Q8IZW8 715 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 DCLK2Q8N568 766 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 KCTD13Q8WZ19 329 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 CERS2Q96G23 380 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 ZNF385DQ9H6B1 395 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 CAB39LQ9H9S4 337 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 GNEQ9Y223 722 aaKnown RBP10.09□□□□□ -0.79
MSH2-202ENST00000406134 LRCH1Q9Y2L9 728 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 SNX10Q9Y5X0 201 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 CCNT2O60583 730 aaKnown RBP10.09□□□□□ -0.79
MSH2-202ENST00000406134 SCAPQ12770 1279 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 EIF4EBP2Q13542 120 aaPredicted RBP10.09□□□□□ -0.79
MSH2-202ENST00000406134 FRG1Q14331 258 aaKnown RBP10.09□□□□□ -0.79
MSH2-202ENST00000406134 RAB41Q5JT25 222 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 TMCO4Q5TGY1 634 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 IRGCQ6NXR0 463 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 FRMD7Q6ZUT3 714 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 FASTKD5Q7L8L6 764 aaKnown RBP10.09□□□□□ -0.79
MSH2-202ENST00000406134 MFSD6LQ8IWD5 586 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 ZNF781Q8N8C0 355 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 BEST2Q8NFU1 509 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 THTPAQ9BU02 230 aa10.09□□□□□ -0.79
MSH2-202ENST00000406134 GCOM2Q9BZD3 368 aaPredicted RBP10.09□□□□□ -0.79
MSH2-202ENST00000406134 KCNK1O00180 336 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 LTFP02788 710 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 ATP5BP06576 529 aaKnown RBP10.08□□□□□ -0.8
MSH2-202ENST00000406134 ITGAXP20702 1163 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 CYP2B6P20813 491 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 ABCG1P45844 678 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 CCR10P46092 362 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 SLC9B1Q4ZJI4 515 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 FSTL4Q6MZW2 842 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 NOTUMQ6P988 496 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 HACE1Q8IYU2 909 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 SMC1BQ8NDV3 1235 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 C3orf58Q8NDZ4 430 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 ADAM32Q8TC27 787 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 MICAL1Q8TDZ2 1067 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 MCUR1Q96AQ8 359 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 PPP1R10Q96QC0 940 aaKnown RBP10.08□□□□□ -0.8
MSH2-202ENST00000406134 FAM49AQ9H0Q0 323 aaPredicted RBP10.08□□□□□ -0.8
MSH2-202ENST00000406134 ADAMTS6Q9UKP5 1117 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 SCN10AQ9Y5Y9 1956 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 YJEFN3A6XGL0 299 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms