RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ALKBH1Q13686 389 aaKnown RBP4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 KRT32Q14532 448 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 NAA25Q14CX7 972 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 TSTQ16762 297 aaKnown RBP4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 GXYLT1Q4G148 440 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 FBXO43Q4G163 708 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 ZNF362Q5T0B9 420 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 DENND1BQ6P3S1 775 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 CLEC4GQ6UXB4 293 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 RANBP10Q6VN20 620 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 RTL10Q7L3V2 364 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 MDGA2Q7Z553 956 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 TMEM200AQ86VY9 491 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 RHPN2Q8IUC4 686 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 PNLDC1Q8NA58 520 aaKnown RBP4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 USP38Q8NB14 1042 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 FAM110DQ8TAY7 271 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 HDAC2Q92769 488 aaKnown RBP4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 RITA1Q96K30 269 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 ZNF347Q96SE7 839 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 BARD1Q99728 777 aaKnown RBP4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 CLSTN3Q9BQT9 956 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 NUAK2Q9H093 628 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 LMAN2LQ9H0V9 348 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 TOR3AQ9H497 397 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 JMJD4Q9H9V9 463 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 ARL8BQ9NVJ2 186 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 ZDHHC7Q9NXF8 308 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 ARL15Q9NXU5 204 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 TERF2IPQ9NYB0 399 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 FBXO9Q9UK97 447 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 NAALADL1Q9UQQ1 740 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 ENTPD2Q9Y5L3 495 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 CYP46A1Q9Y6A2 500 aa4.28□□□□□ -1.72
HMGB1P17-201ENST00000403495 FNDC1Q4ZHG4 1894 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 A0A1W2PPH5 198 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 TCRBV7S3A2A0A539 114 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 SH2D7A6NKC9 451 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 TARM1B6A8C7 271 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 H3BNC9 293 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 TNPO2O14787 897 aaKnown RBP4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 FOXN1O15353 648 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 RTN3O95197 1032 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 GCP02774 474 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 PKMP14618 531 aaKnown RBP4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 ST6GAL1P15907 406 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 TACR2P21452 398 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 BDNFP23560 247 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 TYK2P29597 1187 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 PSMC2P35998 433 aaKnown RBP4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 RXRGP48443 463 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 YPEL5P62699 121 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 ZBTB16Q05516 673 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 KLF10Q13118 480 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 HAUS3Q68CZ6 603 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 SLC30A9Q6PML9 568 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 RINLQ6ZS11 566 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 LRRC8DQ7L1W4 858 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 R3HCC1LQ7Z5L2 792 aaKnown RBP4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 GRASPQ7Z6J2 395 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 ADGRG6Q86SQ4 1221 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 MON1AQ86VX9 555 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 CHSY1Q86X52 802 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 LDLRAD3Q86YD5 345 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 RFX6Q8HWS3 928 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 BRSK2Q8IWQ3 736 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 EXD3Q8N9H8 876 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 ATP2A3Q93084 1043 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 ZNF845Q96IR2 970 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 HIC2Q96JB3 615 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 ADAD1Q96M93 576 aaKnown RBP4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 FYTTD1Q96QD9 318 aaKnown RBP4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 EYA3Q99504 573 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 TAOK3Q9H2K8 898 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 UNC45AQ9H3U1 944 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 SLC32A1Q9H598 525 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 SFXN1Q9H9B4 322 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 SLC22A11Q9NSA0 550 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 OLA1Q9NTK5 396 aaKnown RBP4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 BLOC1S4Q9NUP1 217 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 CNOT7Q9UIV1 285 aaKnown RBP4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 TLK1Q9UKI8 766 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 PKP3Q9Y446 797 aa4.27□□□□□ -1.73
HMGB1P17-201ENST00000403495 A0A087X1B8 175 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 TMEM191CA6NGB0 347 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 JTBO76095 146 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 CYP4B1P13584 511 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 HNF1BP35680 557 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 HARS2P49590 506 aaKnown RBP4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 CACNA2D1P54289 1103 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 FOXD4Q12950 439 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 MTA1Q13330 715 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 BYSLQ13895 437 aaKnown RBP4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 IL13RA2Q14627 380 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 ERCC6LQ2NKX8 1250 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 ANXA2RQ3ZCQ2 193 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 TMEM88Q6PEY1 159 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 OLFML1Q6UWY5 402 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 GGNQ86UU5 652 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms