RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 VHLP40337 213 aa13.35□□□□□ -0.27
PRAME-203ENST00000402697 GRIA1P42261 906 aa13.35□□□□□ -0.27
PRAME-203ENST00000402697 POLD2P49005 469 aa13.35□□□□□ -0.27
PRAME-203ENST00000402697 AQP5P55064 265 aa13.35□□□□□ -0.27
PRAME-203ENST00000402697 TPI1P60174 286 aa13.35□□□□□ -0.27
PRAME-203ENST00000402697 BEX3Q00994 111 aa13.35□□□□□ -0.27
PRAME-203ENST00000402697 PDE1CQ14123 709 aaPredicted RBP13.35□□□□□ -0.27
PRAME-203ENST00000402697 N4BP2L1Q5TBK1 243 aaPredicted RBP13.35□□□□□ -0.27
PRAME-203ENST00000402697 LINC00523Q86TU6 105 aa13.35□□□□□ -0.27
PRAME-203ENST00000402697 KLHDC8BQ8IXV7 354 aa13.35□□□□□ -0.27
PRAME-203ENST00000402697 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.35□□□□□ -0.272e-8■■■□□ 18.9
PRAME-203ENST00000402697 TMEM40Q8WWA1 233 aa13.35□□□□□ -0.27
PRAME-203ENST00000402697 ZNF570Q96NI8 536 aa13.35□□□□□ -0.27
PRAME-203ENST00000402697 EPAS1Q99814 870 aa13.35□□□□□ -0.27
PRAME-203ENST00000402697 LPIN3Q9BQK8 851 aa13.35□□□□□ -0.27
PRAME-203ENST00000402697 MECRQ9BV79 373 aa13.35□□□□□ -0.27
PRAME-203ENST00000402697 CCDC106Q9BWC9 280 aa13.35□□□□□ -0.27
PRAME-203ENST00000402697 TSPYL2Q9H2G4 693 aaPredicted RBP13.35□□□□□ -0.27
PRAME-203ENST00000402697 KLK14Q9P0G3 267 aa13.35□□□□□ -0.27
PRAME-203ENST00000402697 KLHL8Q9P2G9 620 aaPredicted RBP13.35□□□□□ -0.27
PRAME-203ENST00000402697 ZNF212Q9UDV6 495 aa13.35□□□□□ -0.27
PRAME-203ENST00000402697 NUMBLQ9Y6R0 609 aa13.35□□□□□ -0.27
PRAME-203ENST00000402697 DNAH12Q6ZR08 3092 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 TIMM44O43615 452 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 CREB3O43889 395 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 CIB2O75838 187 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 GSRP00390 522 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 PROCP04070 461 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 GM2AP17900 193 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 ERCC2P18074 760 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 PTPN3P26045 913 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 TYK2P29597 1187 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 TM4SF4P48230 202 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 SLC1A6P48664 564 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 HARS2P49590 506 aaKnown RBP13.34□□□□□ -0.27
PRAME-203ENST00000402697 SESN2P58004 480 aaPredicted RBP13.34□□□□□ -0.27
PRAME-203ENST00000402697 GALNT2Q10471 571 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 PRPSAP1Q14558 356 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 CCDC6Q16204 474 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 ZNF618Q5T7W0 954 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 WSCD1Q658N2 575 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 TWF2Q6IBS0 349 aaKnown RBP13.34□□□□□ -0.27
PRAME-203ENST00000402697 RSPH3Q86UC2 560 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 RASSF3Q86WH2 238 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 CCDC117Q8IWD4 279 aaPredicted RBP13.34□□□□□ -0.27
PRAME-203ENST00000402697 SENP8Q96LD8 212 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 SYT15Q9BQS2 421 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 IL22Q9GZX6 179 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 GBA3Q9H227 469 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 WDR6Q9NNW5 1121 aaKnown RBP13.34□□□□□ -0.27
PRAME-203ENST00000402697 PIGVQ9NUD9 493 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 NKX1-2Q9UD57 310 aaPredicted RBP13.34□□□□□ -0.27
PRAME-203ENST00000402697 ABT1Q9ULW3 272 aaKnown RBP13.34□□□□□ -0.27
PRAME-203ENST00000402697 GIT1Q9Y2X7 761 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 RPS6KL1Q9Y6S9 549 aa13.34□□□□□ -0.27
PRAME-203ENST00000402697 ARHGEF37A1IGU5 675 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 B2RBV5 119 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 TMEM114B3SHH9 223 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 PTGESO14684 152 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 TPP1O14773 563 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 TREHO43280 583 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 CA12O43570 354 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 HCRTO43612 131 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 TM7SF2O76062 418 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 LTFP02788 710 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 FGF3P11487 239 aaPredicted RBP13.33□□□□□ -0.27
PRAME-203ENST00000402697 PRDX6P30041 224 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 PTDSS1P48651 473 aaKnown RBP13.33□□□□□ -0.27
PRAME-203ENST00000402697 LIMK2P53671 638 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 SLC34A1Q06495 639 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 TEDDM1Q5T9Z0 273 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 METTL21CQ5VZV1 264 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 KCTD11Q693B1 232 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 RINLQ6ZS11 566 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 FAM35AQ86V20 835 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 PPFIBP2Q8ND30 876 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 TRPV1Q8NER1 839 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 SLC7A14Q8TBB6 771 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 RDH11Q8TC12 318 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 SMARCD1Q96GM5 515 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 RILPQ96NA2 401 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 RBBP8Q99708 897 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 RNF39Q9H2S5 420 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 GPAMQ9HCL2 828 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 RNF19AQ9NV58 838 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 SYBUQ9NX95 663 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 DDX43Q9NXZ2 648 aaKnown RBP13.33□□□□□ -0.27
PRAME-203ENST00000402697 COPG2Q9UBF2 871 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 ANGPTL2Q9UKU9 493 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 VANGL2Q9ULK5 521 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 CDY2AQ9Y6F7 541 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 CDY1Q9Y6F8 540 aa13.33□□□□□ -0.27
PRAME-203ENST00000402697 HTTP42858 3142 aa13.33□□□□□ -0.28
PRAME-203ENST00000402697 MYO18AQ92614 2054 aaKnown RBP13.33□□□□□ -0.28
PRAME-203ENST00000402697 AP1G2O75843 785 aa13.33□□□□□ -0.28
PRAME-203ENST00000402697 SNUPNO95149 360 aaKnown RBP13.33□□□□□ -0.28
PRAME-203ENST00000402697 THP07101 528 aa13.33□□□□□ -0.28
PRAME-203ENST00000402697 MYL3P08590 195 aa13.33□□□□□ -0.28
PRAME-203ENST00000402697 CXCR3P49682 368 aa13.33□□□□□ -0.28
PRAME-203ENST00000402697 MDH1BQ5I0G3 518 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms