RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 IL5RAQ01344 420 aa14.04□□□□□ -0.16
RUNX3-203ENST00000399916 DEPDC1Q5TB30 811 aa14.04□□□□□ -0.16
RUNX3-203ENST00000399916 PPP1R18Q6NYC8 613 aa14.04□□□□□ -0.16
RUNX3-203ENST00000399916 TDRD5Q8NAT2 981 aaKnown RBP14.04□□□□□ -0.16
RUNX3-203ENST00000399916 RORBQ92753 470 aa14.04□□□□□ -0.16
RUNX3-203ENST00000399916 RWDD3Q9Y3V2 267 aa14.04□□□□□ -0.16
RUNX3-203ENST00000399916 PCDHA2Q9Y5H9 948 aa14.04□□□□□ -0.16
RUNX3-203ENST00000399916 KRBA1A5PL33 1030 aa14.04□□□□□ -0.16
RUNX3-203ENST00000399916 STX16-NPEPL1H3BU86 382 aa14.04□□□□□ -0.16
RUNX3-203ENST00000399916 SLC16A4O15374 487 aa14.04□□□□□ -0.16
RUNX3-203ENST00000399916 LZTS3O60299 673 aaPredicted RBP14.04□□□□□ -0.16
RUNX3-203ENST00000399916 MYCLP12524 364 aaPredicted RBP14.04□□□□□ -0.16
RUNX3-203ENST00000399916 DLG4P78352 724 aa14.04□□□□□ -0.16
RUNX3-203ENST00000399916 MFSD7Q6UXD7 560 aa14.04□□□□□ -0.16
RUNX3-203ENST00000399916 RCOR2Q8IZ40 523 aa14.04□□□□□ -0.16
RUNX3-203ENST00000399916 PSD4Q8NDX1 1056 aa14.04□□□□□ -0.16
RUNX3-203ENST00000399916 NSUN6Q8TEA1 469 aaKnown RBP14.04□□□□□ -0.16
RUNX3-203ENST00000399916 LRRN4Q8WUT4 740 aa14.04□□□□□ -0.16
RUNX3-203ENST00000399916 PROX1Q92786 737 aa14.04□□□□□ -0.16
RUNX3-203ENST00000399916 GABBR1Q9UBS5 961 aa14.04□□□□□ -0.16
RUNX3-203ENST00000399916 VILLO15195 856 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 PRPF4O43172 522 aaKnown RBP eCLIP14.03□□□□□ -0.16
RUNX3-203ENST00000399916 TGFB1I1O43294 461 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 AVILO75366 819 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 SERPINB7O75635 380 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 OAS1P00973 400 aaKnown RBP14.03□□□□□ -0.16
RUNX3-203ENST00000399916 KRT20P35900 424 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 BCAR1P56945 870 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 DMC1Q14565 340 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 DHFR2Q86XF0 187 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 PHC2Q8IXK0 858 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 SLC15A4Q8N697 577 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 SEPT1Q8WYJ6 367 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 LENG8Q96PV6 779 aaPredicted RBP14.03□□□□□ -0.16
RUNX3-203ENST00000399916 ACCSQ96QU6 501 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 ASPSCR1Q9BZE9 553 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 INIPQ9NRY2 104 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.03□□□□□ -0.16
RUNX3-203ENST00000399916 GTPBP10A4D1E9 387 aaKnown RBP14.03□□□□□ -0.16
RUNX3-203ENST00000399916 H3BNX3 289 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 POLRMTO00411 1230 aaKnown RBP14.03□□□□□ -0.16
RUNX3-203ENST00000399916 CPNE3O75131 537 aaKnown RBP14.03□□□□□ -0.16
RUNX3-203ENST00000399916 FARP2O94887 1054 aaPredicted RBP14.03□□□□□ -0.16
RUNX3-203ENST00000399916 ALDH1B1P30837 517 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 GRIA2P42262 883 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 SLC9A3P48764 834 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 SLC13A2Q13183 592 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 AARS2Q5JTZ9 985 aaKnown RBP14.03□□□□□ -0.16
RUNX3-203ENST00000399916 SEL1L3Q68CR1 1132 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 CBR4Q8N4T8 237 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 ZNF577Q9BSK1 485 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 IGSF9Q9P2J2 1179 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 SQORQ9Y6N5 450 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 H0YC42 278 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 PRPSAP2O60256 369 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 RAD17O75943 681 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 ACADVLP49748 655 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 RAP1GAP2Q684P5 730 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 ABRAXAS1Q6UWZ7 409 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 FAM20AQ96MK3 541 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 PKP2Q99959 881 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 LRRC19Q9H756 370 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 NEK6Q9HC98 313 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 IP6K2Q9UHH9 426 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 SPATA2Q9UM82 520 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 ERVK-11Q9UQG0 969 aa14.03□□□□□ -0.16
RUNX3-203ENST00000399916 DNAJA2O60884 412 aa14.02□□□□□ -0.16
RUNX3-203ENST00000399916 BLVRAP53004 296 aa14.02□□□□□ -0.16
RUNX3-203ENST00000399916 HERC6Q8IVU3 1022 aa14.02□□□□□ -0.16
RUNX3-203ENST00000399916 TNS4Q8IZW8 715 aa14.02□□□□□ -0.16
RUNX3-203ENST00000399916 NACC1Q96RE7 527 aa14.02□□□□□ -0.16
RUNX3-203ENST00000399916 TP63Q9H3D4 680 aaPredicted RBP14.02□□□□□ -0.16
RUNX3-203ENST00000399916 RGS17Q9UGC6 210 aaPredicted RBP14.02□□□□□ -0.16
RUNX3-203ENST00000399916 PPME1Q9Y570 386 aa14.02□□□□□ -0.16
RUNX3-203ENST00000399916 NUP188Q5SRE5 1749 aa14.02□□□□□ -0.16
RUNX3-203ENST00000399916 ARPC4-TTLL3A0A0A6YYG9 625 aa14.02□□□□□ -0.16
RUNX3-203ENST00000399916 MYO1GB0I1T2 1018 aa14.02□□□□□ -0.16
RUNX3-203ENST00000399916 CYP7B1O75881 506 aa14.02□□□□□ -0.16
RUNX3-203ENST00000399916 RHOBTB1O94844 696 aa14.02□□□□□ -0.16
RUNX3-203ENST00000399916 FOSP01100 380 aaPredicted RBP14.02□□□□□ -0.16
RUNX3-203ENST00000399916 CDH1P12830 882 aa14.02□□□□□ -0.16
RUNX3-203ENST00000399916 XRCC1P18887 633 aaPredicted RBP14.02□□□□□ -0.16
RUNX3-203ENST00000399916 ITIH1P19827 911 aa14.02□□□□□ -0.16
RUNX3-203ENST00000399916 BTG3Q14201 252 aaPredicted RBP14.02□□□□□ -0.16
RUNX3-203ENST00000399916 CYP51A1Q16850 503 aa14.02□□□□□ -0.16
RUNX3-203ENST00000399916 CAMK1DQ8IU85 385 aa14.02□□□□□ -0.16
RUNX3-203ENST00000399916 SFRP1Q8N474 314 aa14.02□□□□□ -0.16
RUNX3-203ENST00000399916 ASB12Q8WXK4 309 aa14.02□□□□□ -0.16
RUNX3-203ENST00000399916 OLFM1Q99784 485 aa14.02□□□□□ -0.16
RUNX3-203ENST00000399916 ACAT2Q9BWD1 397 aa14.02□□□□□ -0.16
RUNX3-203ENST00000399916 MED26O95402 600 aa14.02□□□□□ -0.17
RUNX3-203ENST00000399916 FUCA1P04066 466 aa14.02□□□□□ -0.17
RUNX3-203ENST00000399916 SPATA31C1P0DKV0 1188 aa14.02□□□□□ -0.17
RUNX3-203ENST00000399916 PCNAP12004 261 aa14.02□□□□□ -0.17
RUNX3-203ENST00000399916 YWHAHQ04917 246 aaPredicted RBP14.02□□□□□ -0.17
RUNX3-203ENST00000399916 TUBA3CQ13748 450 aa14.02□□□□□ -0.17
RUNX3-203ENST00000399916 ARL13BQ3SXY8 428 aa14.02□□□□□ -0.17
RUNX3-203ENST00000399916 CMPK2Q5EBM0 449 aa14.02□□□□□ -0.17
RUNX3-203ENST00000399916 SPANXN2Q5MJ10 180 aa14.02□□□□□ -0.17
RUNX3-203ENST00000399916 OR6B2Q6IFH4 312 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms