RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 SNX13Q9Y5W8 968 aa11.28□□□□□ -0.6
CACNA1C-215ENST00000399637 SNCAIPQ9Y6H5 919 aa11.28□□□□□ -0.6
CACNA1C-215ENST00000399637 SLCO1B7G3V0H7 640 aa11.27□□□□□ -0.6
CACNA1C-215ENST00000399637 SLC2A4P14672 509 aa11.27□□□□□ -0.6
CACNA1C-215ENST00000399637 MTM1Q13496 603 aa11.27□□□□□ -0.6
CACNA1C-215ENST00000399637 GJB7Q6PEY0 223 aa11.27□□□□□ -0.6
CACNA1C-215ENST00000399637 PRMT6Q96LA8 375 aaPredicted RBP11.27□□□□□ -0.6
CACNA1C-215ENST00000399637 PDP2Q9P2J9 529 aa11.27□□□□□ -0.6
CACNA1C-215ENST00000399637 SUCOQ9UBS9 1254 aaKnown RBP11.27□□□□□ -0.6
CACNA1C-215ENST00000399637 CCL16O15467 120 aa11.27□□□□□ -0.6
CACNA1C-215ENST00000399637 CCDC130P13994 396 aa11.27□□□□□ -0.6
CACNA1C-215ENST00000399637 GLRBP48167 497 aa11.27□□□□□ -0.6
CACNA1C-215ENST00000399637 FXR2P51116 673 aaKnown RBP eCLIP11.27□□□□□ -0.6
CACNA1C-215ENST00000399637 VAC14Q08AM6 782 aa11.27□□□□□ -0.6
CACNA1C-215ENST00000399637 BIKQ13323 160 aa11.27□□□□□ -0.6
CACNA1C-215ENST00000399637 RSBN1Q5VWQ0 802 aaPredicted RBP11.27□□□□□ -0.6
CACNA1C-215ENST00000399637 STRA8Q7Z7C7 330 aa11.27□□□□□ -0.6
CACNA1C-215ENST00000399637 ARID3BQ8IVW6 561 aaPredicted RBP11.27□□□□□ -0.6
CACNA1C-215ENST00000399637 CACTIN-AS1Q8N1I8 211 aa11.27□□□□□ -0.6
CACNA1C-215ENST00000399637 DPF2Q92785 391 aa11.27□□□□□ -0.6
CACNA1C-215ENST00000399637 TINF2Q9BSI4 451 aa11.27□□□□□ -0.6
CACNA1C-215ENST00000399637 MRPL42Q9Y6G3 142 aaKnown RBP11.27□□□□□ -0.6
CACNA1C-215ENST00000399637 SMNDC1O75940 238 aaKnown RBP eCLIP11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 PDX1P52945 283 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 FMR1Q06787 632 aaKnown RBP eCLIP11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 NFE2Q16621 373 aaPredicted RBP11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 TRIQKQ629K1 86 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 PDPK2PQ6A1A2 396 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 CXCL17Q6UXB2 119 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 TARS2Q9BW92 718 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 KLHL1Q9NR64 748 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 STK39Q9UEW8 545 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 SH3GLB1Q9Y371 365 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 H3BRB1 525 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 GMFGO60234 142 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 FGRP09769 529 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 TUFMP49411 452 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 POU5F1Q01860 360 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 AAK1Q2M2I8 961 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 NAT16Q8N8M0 369 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 CLEC4MQ9H2X3 399 aaPredicted RBP11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 ZCCHC17Q9NP64 241 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 STON1Q9Y6Q2 735 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 RBAK-RBAKDNI3L0D1 243 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 PRODHO43272 600 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 ELNP15502 786 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 CES1P23141 567 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 MTA1Q13330 715 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 NR1I3Q14994 352 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 RAET1GQ6H3X3 334 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 REXO1L1PQ8IX06 675 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 IZUMO1Q8IYV9 350 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 LGI2Q8N0V4 545 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 FAM172AQ8WUF8 416 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 ZIM3Q96PE6 472 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 L1RE1Q9UN81 338 aa11.27□□□□□ -0.61
CACNA1C-215ENST00000399637 TRIM43BA6NCK2 446 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 TMEM114B3SHH9 223 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 CSDE1O75534 798 aaKnown RBP11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 MFN2O95140 757 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 SCNN1AP37088 669 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 ERVK-9P63128 1117 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 ERVK-24P63145 666 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 CRYMQ14894 314 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 TSNQ15631 228 aaKnown RBP11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 TFDP3Q5H9I0 405 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 PSRC1Q6PGN9 363 aaPredicted RBP11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 KIAA0408Q6ZU52 694 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 PTAR1Q7Z6K3 402 aaPredicted RBP11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 NACC2Q96BF6 587 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 SGPL1O95470 568 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 HIST1H2ABP04908 130 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 IL5RAQ01344 420 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 CXCL9Q07325 125 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 FCHO2Q0JRZ9 810 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 OVGP1Q12889 678 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 PDZK1Q5T2W1 519 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 TAF2Q6P1X5 1199 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 HIST3H2AQ7L7L0 130 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 DENND6AQ8IWF6 608 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 HIST1H2ACQ93077 130 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 COL26A1Q96A83 441 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 STOML2Q9UJZ1 356 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 H3BMM5 538 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 AVILO75366 819 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 RTN3O95197 1032 aaPredicted RBP11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 WASP42768 502 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 NAMPTP43490 491 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 EIF2S3LQ2VIR3 472 aaKnown RBP11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 TFAP2DQ7Z6R9 452 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 CCDC33Q8N5R6 958 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 TRPC4APQ8TEL6 797 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 MTMR12Q9C0I1 747 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 FBXO44Q9H4M3 255 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 FBXO28Q9NVF7 368 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 TPBGLP0DKB5 382 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 RPA1P27694 616 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 KPNB1Q14974 876 aaKnown RBP11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 SCUBE1Q8IWY4 988 aa11.26□□□□□ -0.61
CACNA1C-215ENST00000399637 BRINP2Q9C0B6 783 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms