RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 TTC33Q6PID6 262 aaPredicted RBP14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 PHF21BQ96EK2 531 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 LRRC37A3O60309 1634 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 ROBO3Q96MS0 1386 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 CYP2A6P11509 494 aaPredicted RBP14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 ACLYP53396 1101 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 CSTF3Q12996 717 aaKnown RBP14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 MYBPC2Q14324 1141 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 ATP6AP1LQ52LC2 224 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 C1QTNF7Q9BXJ2 289 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 FAM105AQ9NUU6 356 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 VANGL2Q9ULK5 521 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 TMCC3Q9ULS5 477 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 COL16A1Q07092 1604 aaPredicted RBP14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 E9PBE3 544 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 TRDMT1O14717 391 aaKnown RBP14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 KLHL41O60662 606 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 CDH8P55286 799 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 STX5Q13190 355 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 TMEM119Q4V9L6 283 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 CEP78Q5JTW2 689 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 ERMARDQ5T6L9 678 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 DET1Q7L5Y6 550 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 CLYBLQ8N0X4 340 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 SERPINB12Q96P63 405 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 CNPY3Q9BT09 278 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 ACTR8Q9H981 624 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 RGS17Q9UGC6 210 aaPredicted RBP14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 DNAJC16Q9Y2G8 782 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 CYP3A7-CYP3A51PA0A087WV96 503 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 RGS5O15539 181 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 CYP3A7P24462 503 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 C21orf59P57076 290 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 EVX2Q03828 476 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 BCL2L1Q07817 233 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 NFIL3Q16649 462 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 USP39Q53GS9 565 aaKnown RBP14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 DAB2IPQ5VWQ8 1189 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 ICE2Q659A1 982 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 CENPTQ96BT3 561 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 PCDHGA4Q9Y5G9 962 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 GOLGA8TH3BQL2 631 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 RPL9P32969 192 aaKnown RBP14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 LRRC34Q8IZ02 419 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 RSPH1Q8WYR4 309 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 SEMA4DQ92854 862 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 CTNNAL1Q9UBT7 734 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 N6AMT1Q9Y5N5 214 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 FYNP06241 537 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 SLC2A4P14672 509 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 SLC45A4Q5BKX6 768 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 SLC24A5Q71RS6 500 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 GLT6D1Q7Z4J2 308 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 SAPCD2Q86UD0 394 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 TRAPPC5Q8IUR0 188 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 CYP4X1Q8N118 509 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 PPP1R10Q96QC0 940 aaKnown RBP14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 DRG1Q9Y295 367 aaKnown RBP14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 ZBTB22O15209 634 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 BAIAP3O94812 1187 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 FGF19O95750 216 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 NFICP08651 508 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 CCND3P30281 292 aaPredicted RBP14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 GLUD2P49448 558 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 INSCQ1MX18 579 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 SCUBE3Q8IX30 993 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 TDRD5Q8NAT2 981 aaKnown RBP14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 ENGASEQ8NFI3 743 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 SH3BP4Q9P0V3 963 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 ARVCFO00192 962 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 GET4Q7L5D6 327 aaPredicted RBP14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 CLIP3Q96DZ5 547 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 PAFAH2Q99487 392 aa14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 FRMD8Q9BZ67 464 aaPredicted RBP14.53□□□□□ -0.08
PCDHA11-201ENST00000398640 TREHO43280 583 aa14.52□□□□□ -0.08
PCDHA11-201ENST00000398640 AKAP3O75969 853 aa14.52□□□□□ -0.08
PCDHA11-201ENST00000398640 CYP2A7P20853 494 aa14.52□□□□□ -0.08
PCDHA11-201ENST00000398640 DNAJC9Q8WXX5 260 aa14.52□□□□□ -0.08
PCDHA11-201ENST00000398640 CCDC126Q96EE4 140 aa14.52□□□□□ -0.08
PCDHA11-201ENST00000398640 ZBTB45Q96K62 511 aaPredicted RBP14.52□□□□□ -0.08
PCDHA11-201ENST00000398640 KCNMB3Q9NPA1 279 aa14.52□□□□□ -0.08
PCDHA11-201ENST00000398640 MPP6Q9NZW5 540 aa14.52□□□□□ -0.08
PCDHA11-201ENST00000398640 NT5C1B-RDH14C9J2C7 533 aa14.52□□□□□ -0.08
PCDHA11-201ENST00000398640 ATP9AO75110 1047 aa14.52□□□□□ -0.08
PCDHA11-201ENST00000398640 YWHAZP63104 245 aaKnown RBP14.52□□□□□ -0.08
PCDHA11-201ENST00000398640 SEL1L3Q68CR1 1132 aa14.52□□□□□ -0.08
PCDHA11-201ENST00000398640 DNAJC1Q96KC8 554 aaKnown RBP14.52□□□□□ -0.08
PCDHA11-201ENST00000398640 AGXT2Q9BYV1 514 aa14.52□□□□□ -0.08
PCDHA11-201ENST00000398640 CARD9Q9H257 536 aa14.52□□□□□ -0.08
PCDHA11-201ENST00000398640 TBC1D13Q9NVG8 400 aa14.52□□□□□ -0.08
PCDHA11-201ENST00000398640 SLC27A5Q9Y2P5 690 aa14.52□□□□□ -0.08
PCDHA11-201ENST00000398640 SNX13Q9Y5W8 968 aa14.52□□□□□ -0.08
PCDHA11-201ENST00000398640 SOWAHBA6NEL2 793 aa14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 ATP6V1C1P21283 382 aa14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 COMMD2Q86X83 199 aa14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 MAP4K3Q8IVH8 894 aa14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 SERPINB11Q96P15 392 aa14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 HAO1Q9UJM8 370 aa14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 C4BP0C0L5 1744 aa14.52□□□□□ -0.09
PCDHA11-201ENST00000398640 COL1A1P02452 1464 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms