RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 LRIF1Q5T3J3 769 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 MCEMP1Q8IX19 187 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 RTL3Q8N8U3 475 aaKnown RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 RDH11Q8TC12 318 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 MAP4K1Q92918 833 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 KLHL29Q96CT2 875 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 PSKH2Q96QS6 385 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 MXRA8Q9BRK3 442 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 TRIM51Q9BSJ1 452 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 UNKQ9C0B0 810 aaKnown RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 STRADBQ9C0K7 418 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 EPN3Q9H201 632 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 TRABDQ9H4I3 376 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 SCN3BQ9NY72 215 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 WWOXQ9NZC7 414 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 MINPP1Q9UNW1 487 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 SAGE2PA6NJ88 616 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 BUB1O43683 1085 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 PDE9AO76083 593 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 KCNK5O95279 499 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 COL6A1P12109 1028 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 DGKAP23743 735 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 RPA1P27694 616 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 CAP2P40123 477 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 CCNFP41002 786 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 MAGEA10P43363 369 aaPredicted RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 AP1S1P61966 158 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 MCL1Q07820 350 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 PDCD4Q53EL6 469 aaKnown RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 DCST1Q5T197 706 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 METTL7BQ6UX53 244 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 CASP12Q6UXS9 341 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 PAQR7Q86WK9 346 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 TMCO6Q96DC7 493 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 CNBD2Q96M20 576 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 TGS1Q96RS0 853 aaKnown RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 NUDT9Q9BW91 350 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 VPS11Q9H270 941 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 SLC24A3Q9HC58 644 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 CD209Q9NNX6 404 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 TAS2R13Q9NYV9 303 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 PCDHA6Q9UN73 950 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 MAGED2Q9UNF1 606 aaPredicted RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 PCDHB5Q9Y5E4 795 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 PCDHA8Q9Y5H6 950 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 ROBO3Q96MS0 1386 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 CYP2D7A0A087X1C5 515 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 SSU72P8A0A1W2PR75 194 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 KCNN4O15554 427 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 IRAK2O43187 625 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 ATP9BO43861 1147 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 GLUD1P00367 558 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 LPLP06858 475 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 HBQ1P09105 142 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 CYP3A5P20815 502 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 SAT1P21673 171 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 MARK3P27448 753 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 DNAJA1P31689 397 aaKnown RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 EIF4A3P38919 411 aaKnown RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 RHBDL3P58872 404 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 RHOAP61586 193 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 BDH1Q02338 343 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 GCNT1Q02742 428 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 COASYQ13057 564 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 KPNB1Q14974 876 aaKnown RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 SF3B3Q15393 1217 aaKnown RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 LONRF1Q17RB8 773 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 GRAMD1BQ3KR37 738 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 Q4G0T1 1027 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 MDH1BQ5I0G3 518 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 C9orf131Q5VYM1 1079 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 ZNF720Q7Z2F6 126 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 CHSY1Q86X52 802 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 ATG16L2Q8NAA4 619 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 PJA1Q8NG27 643 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 CAPSLQ8WWF8 208 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 MTERF3Q96E29 417 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 CDCA3Q99618 268 aaPredicted RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 CLEC4MQ9H2X3 399 aaPredicted RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.78□□□□□ -1.96
CHD9-202ENST00000398510 FNIP2Q9P278 1114 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 RPS6KA6Q9UK32 745 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 SUFUQ9UMX1 484 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 ATP8A1Q9Y2Q0 1164 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 ASTN2O75129 1339 aaPredicted RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 A0A087X1B8 175 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 A0A1B0GTH6 734 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 ZSCAN9O15535 394 aaPredicted RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 NMT2O60551 498 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 PHF2O75151 1096 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 IPO13O94829 963 aaKnown RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 IFNGP01579 166 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 PTX3P26022 381 aaPredicted RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 KLRC2P26717 231 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 STOMP27105 288 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 CRABP2P29373 138 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 TYK2P29597 1187 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 NDUFV1P49821 464 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 GEMP55040 296 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms