RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 TMEM191CA6NGB0 347 aa14.71□□□□□ -0.05
HDDC2-202ENST00000398153 EIF3CLB5ME19 914 aaKnown RBP14.71□□□□□ -0.05
HDDC2-202ENST00000398153 E9PAM4 449 aa14.71□□□□□ -0.05
HDDC2-202ENST00000398153 I6L893 689 aaPredicted RBP14.71□□□□□ -0.05
HDDC2-202ENST00000398153 SYNCRIPO60506 623 aaKnown RBP14.71□□□□□ -0.05
HDDC2-202ENST00000398153 GFRA3O60609 400 aa14.71□□□□□ -0.05
HDDC2-202ENST00000398153 ZNF217O75362 1048 aa14.71□□□□□ -0.05
HDDC2-202ENST00000398153 IL12RB1P42701 662 aa14.71□□□□□ -0.05
HDDC2-202ENST00000398153 ATXN1P54253 815 aaKnown RBP14.71□□□□□ -0.05
HDDC2-202ENST00000398153 ST8SIA6P61647 398 aa14.71□□□□□ -0.05
HDDC2-202ENST00000398153 MAPK8IP2Q13387 824 aaPredicted RBP14.71□□□□□ -0.05
HDDC2-202ENST00000398153 SIM2Q14190 667 aaPredicted RBP14.71□□□□□ -0.05
HDDC2-202ENST00000398153 PLEKHG6Q3KR16 790 aa14.71□□□□□ -0.05
HDDC2-202ENST00000398153 FSCBQ5H9T9 825 aa14.71□□□□□ -0.05
HDDC2-202ENST00000398153 PITRM1Q5JRX3 1037 aa14.71□□□□□ -0.05
HDDC2-202ENST00000398153 LAIR1Q6GTX8 287 aa14.71□□□□□ -0.05
HDDC2-202ENST00000398153 ANO7Q6IWH7 933 aa14.71□□□□□ -0.05
HDDC2-202ENST00000398153 ALKBH5Q6P6C2 394 aaKnown RBP14.71□□□□□ -0.05
HDDC2-202ENST00000398153 SERPINA13PQ6UXR4 307 aa14.71□□□□□ -0.05
HDDC2-202ENST00000398153 ZNF783Q6ZMS7 281 aa14.71□□□□□ -0.05
HDDC2-202ENST00000398153 SLFN11Q7Z7L1 901 aa14.71□□□□□ -0.05
HDDC2-202ENST00000398153 MDGA1Q8NFP4 955 aa14.71□□□□□ -0.05
HDDC2-202ENST00000398153 LOXL4Q96JB6 756 aa14.71□□□□□ -0.05
HDDC2-202ENST00000398153 EIF3CQ99613 913 aaKnown RBP14.71□□□□□ -0.05
HDDC2-202ENST00000398153 TMEM245Q9H330 911 aa14.71□□□□□ -0.05
HDDC2-202ENST00000398153 ANLNQ9NQW6 1124 aa14.71□□□□□ -0.05
HDDC2-202ENST00000398153 ABHD10Q9NUJ1 306 aa14.71□□□□□ -0.05
HDDC2-202ENST00000398153 CACNA2D2Q9NY47 1150 aa14.71□□□□□ -0.05
HDDC2-202ENST00000398153 BCCIPQ9P287 314 aaKnown RBP eCLIP14.71□□□□□ -0.05
HDDC2-202ENST00000398153 ARHGAP20Q9P2F6 1191 aa14.71□□□□□ -0.05
HDDC2-202ENST00000398153 CNOT8Q9UFF9 292 aaKnown RBP14.71□□□□□ -0.05
HDDC2-202ENST00000398153 A0A087X0T9 212 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 CXorf51AA0A1B0GTR3 108 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 CCP110O43303 1012 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 MFAP3LO75121 409 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 RNF8O76064 485 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 GJB6O95452 261 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 FAM228BP0C875 321 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 HTR7P34969 479 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 NNMTP40261 264 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 CSKP41240 450 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 ECT2LQ008S8 904 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 TBX2Q13207 712 aaPredicted RBP14.7□□□□□ -0.06
HDDC2-202ENST00000398153 SLC18A3Q16572 532 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 PTPRNQ16849 979 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 FUT11Q495W5 492 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 SPDYCQ5MJ68 293 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 C6orf118Q5T5N4 469 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 SH3PXD2AQ5TCZ1 1133 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 CXorf57Q6NSI4 855 aaKnown RBP14.7□□□□□ -0.06
HDDC2-202ENST00000398153 CEP68Q76N32 757 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 TMC6Q7Z403 805 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 C14orf80Q86SX3 495 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 RUBCNQ92622 972 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 ZNF653Q96CK0 615 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 MRFAP1L1Q96HT8 127 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 SPACA7Q96KW9 195 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 ZYG11BQ9C0D3 744 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 ZDHHC4Q9NPG8 344 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 POLR3BQ9NW08 1133 aaPredicted RBP14.7□□□□□ -0.06
HDDC2-202ENST00000398153 DONSONQ9NYP3 566 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 LCMT1Q9UIC8 334 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 INTS6Q9UL03 887 aaKnown RBP14.7□□□□□ -0.06
HDDC2-202ENST00000398153 SMG5Q9UPR3 1016 aaKnown RBP14.7□□□□□ -0.06
HDDC2-202ENST00000398153 DMDP11532 3685 aa14.7□□□□□ -0.06
HDDC2-202ENST00000398153 DOCK4Q8N1I0 1966 aa14.69□□□□□ -0.06
HDDC2-202ENST00000398153 WASH3PC4AMC7 463 aa14.69□□□□□ -0.06
HDDC2-202ENST00000398153 AKR1B15C9JRZ8 316 aaPredicted RBP14.69□□□□□ -0.06
HDDC2-202ENST00000398153 EPHX1P07099 455 aa14.69□□□□□ -0.06
HDDC2-202ENST00000398153 PLEKP08567 350 aaPredicted RBP14.69□□□□□ -0.06
HDDC2-202ENST00000398153 GABRG2P18507 467 aa14.69□□□□□ -0.06
HDDC2-202ENST00000398153 PSMA2P25787 234 aa14.69□□□□□ -0.06
HDDC2-202ENST00000398153 L1CAMP32004 1257 aa14.69□□□□□ -0.06
HDDC2-202ENST00000398153 WASP42768 502 aa14.69□□□□□ -0.06
HDDC2-202ENST00000398153 PXNP49023 591 aaPredicted RBP14.69□□□□□ -0.06
HDDC2-202ENST00000398153 CAMK2GQ13555 558 aaPredicted RBP14.69□□□□□ -0.06
HDDC2-202ENST00000398153 FNDC3BQ53EP0 1204 aaKnown RBP14.69□□□□□ -0.06
HDDC2-202ENST00000398153 EFHC2Q5JST6 749 aa14.69□□□□□ -0.06
HDDC2-202ENST00000398153 CCDC122Q5T0U0 273 aa14.69□□□□□ -0.06
HDDC2-202ENST00000398153 RNF219Q5W0B1 726 aaPredicted RBP14.69□□□□□ -0.06
HDDC2-202ENST00000398153 ASCL5Q7RTU5 278 aa14.69□□□□□ -0.06
HDDC2-202ENST00000398153 ALYREFQ86V81 257 aaKnown RBP14.69□□□□□ -0.06
HDDC2-202ENST00000398153 PSTKQ8IV42 348 aaKnown RBP14.69□□□□□ -0.06
HDDC2-202ENST00000398153 PGBD3Q8N328 593 aa14.69□□□□□ -0.06
HDDC2-202ENST00000398153 GPR161Q8N6U8 529 aaKnown RBP14.69□□□□□ -0.06
HDDC2-202ENST00000398153 HMGB4Q8WW32 186 aa14.69□□□□□ -0.06
HDDC2-202ENST00000398153 FEM1AQ9BSK4 669 aa14.69□□□□□ -0.06
HDDC2-202ENST00000398153 RBSNQ9H1K0 784 aa14.69□□□□□ -0.06
HDDC2-202ENST00000398153 DEF6Q9H4E7 631 aa14.69□□□□□ -0.06
HDDC2-202ENST00000398153 ERVW-1Q9UQF0 538 aa14.69□□□□□ -0.06
HDDC2-202ENST00000398153 PIEZO1Q92508 2521 aa14.69□□□□□ -0.06
HDDC2-202ENST00000398153 USP34Q70CQ2 3546 aa14.69□□□□□ -0.06
HDDC2-202ENST00000398153 EML5Q05BV3 1969 aa14.69□□□□□ -0.06
HDDC2-202ENST00000398153 PLXND1Q9Y4D7 1925 aa14.68□□□□□ -0.06
HDDC2-202ENST00000398153 CKAP5Q14008 2032 aa14.68□□□□□ -0.06
HDDC2-202ENST00000398153 MUC22E2RYF6 1773 aaPredicted RBP14.68□□□□□ -0.06
HDDC2-202ENST00000398153 ZFHX2Q9C0A1 2572 aaPredicted RBP14.68□□□□□ -0.06
HDDC2-202ENST00000398153 ILVBLA1L0T0 632 aa14.68□□□□□ -0.06
HDDC2-202ENST00000398153 TARSL2A2RTX5 802 aaKnown RBP14.68□□□□□ -0.06
HDDC2-202ENST00000398153 SRGAP2O75044 1071 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms