RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 NAA20P61599 178 aa16.38■□□□□ 0.21
CHMP1A-201ENST00000397901 GBE1Q04446 702 aa16.38■□□□□ 0.21
CHMP1A-201ENST00000397901 PDK2Q15119 407 aa16.38■□□□□ 0.21
CHMP1A-201ENST00000397901 MAP7D1Q3KQU3 841 aa16.38■□□□□ 0.21
CHMP1A-201ENST00000397901 CASC4Q6P4E1 433 aa16.38■□□□□ 0.21
CHMP1A-201ENST00000397901 SEPT1Q8WYJ6 367 aa16.38■□□□□ 0.21
CHMP1A-201ENST00000397901 CCDC124Q96CT7 223 aaKnown RBP16.38■□□□□ 0.21
CHMP1A-201ENST00000397901 PPP1R16BQ96T49 567 aa16.38■□□□□ 0.21
CHMP1A-201ENST00000397901 MAGEB5Q9BZ81 275 aa16.38■□□□□ 0.21
CHMP1A-201ENST00000397901 TUBA8Q9NY65 449 aaPredicted RBP16.38■□□□□ 0.21
CHMP1A-201ENST00000397901 ZBTB42B2RXF5 422 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 GPR25O00155 361 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 VDRP11473 427 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 NDST1P52848 882 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 MYBPC1Q00872 1141 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 CREB5Q02930 508 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 TUBB3Q13509 450 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 N4BP2L1Q5TBK1 243 aaPredicted RBP16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 MBLAC2Q68D91 279 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 SLC9A4Q6AI14 798 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 POTEHQ6S545 545 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 ARCQ7LC44 396 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 WDR75Q8IWA0 830 aaKnown RBP16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 HIPK4Q8NE63 616 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 RAB3IL1Q8TBN0 382 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 APBB2Q92870 758 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 LRRC39Q96DD0 335 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 COX4I2Q96KJ9 171 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 C2orf40Q9H1Z8 148 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 CYP4F11Q9HBI6 524 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 SORCS3Q9UPU3 1222 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 PCDHA11Q9Y5I1 949 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 GSRP00390 522 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 AOC1P19801 751 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 MAGEA3P43357 314 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 MAGEA6P43360 314 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 SLC1A6P48664 564 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 CCR3P51677 355 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 CLCN3P51790 818 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 HDAC4P56524 1084 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 PFKPQ01813 784 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 BTKQ06187 659 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 BOLA3Q53S33 107 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 RABGAP1LQ5R372 815 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 TEDDM1Q5T9Z0 273 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 ILDR2Q71H61 639 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 RIOX2Q8IUF8 465 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 EFCAB3Q8N7B9 438 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 MCUQ8NE86 351 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 PIWIL2Q8TC59 973 aaKnown RBP16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 PRPF18Q99633 342 aaKnown RBP16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 CCT7Q99832 543 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 OSBPL6Q9BZF3 934 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 RRN3Q9NYV6 651 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 EMCNQ9ULC0 261 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 ANK1P16157 1881 aa16.37■□□□□ 0.21
CHMP1A-201ENST00000397901 E2F8A0AVK6 867 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 WDR27A2RRH5 827 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 FBP2O00757 339 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 TPP1O14773 563 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 IL18RAPO95256 599 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 IQCF3P0C7M6 154 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 STAG3L1P0CL83 205 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 SRGAP2BP0DMP2 458 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 FGF3P11487 239 aaPredicted RBP16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 TFE3P19532 575 aaPredicted RBP16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 CYP2F1P24903 491 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 GMPRP36959 345 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 SERPINB9P50453 376 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 CDK9P50750 372 aaKnown RBP16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 SLC10A2Q12908 348 aaPredicted RBP16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 PEX6Q13608 980 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 CNGA3Q16281 694 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 PGM2L1Q6PCE3 622 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 TMEM110Q86TL2 294 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 ITPKCQ96DU7 683 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 HPDLQ96IR7 371 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 PNPOQ9NVS9 261 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 APPL1Q9UKG1 709 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 APOBEC2Q9Y235 224 aaKnown RBP16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 CRTAMO95727 393 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 FAM58BPP0C7Q3 252 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 COL6A2P12110 1019 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 SDC4P31431 198 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 PDAP1Q13442 181 aaKnown RBP16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 GOLGA7BQ2TAP0 167 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 HSDL1Q3SXM5 330 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 VWA5B1Q5TIE3 1220 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 ATG14Q6ZNE5 492 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 CDKL3Q8IVW4 592 aaPredicted RBP16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 FZD8Q9H461 694 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 NRDE2Q9H7Z3 1164 aa16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 C6orf203Q9P0P8 240 aaPredicted RBP16.36■□□□□ 0.21
CHMP1A-201ENST00000397901 SIN3BO75182 1162 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 PROCP04070 461 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 ALDOAP04075 364 aaKnown RBP16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 PFKMP08237 780 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 EDNRBP24530 442 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 ATXN1P54253 815 aaKnown RBP16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 NUP107P57740 925 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms