RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 TUBP50607 506 aa18.82■□□□□ 0.6
CHRFAM7A-202ENST00000397827 CLCNKBP51801 687 aa18.82■□□□□ 0.6
CHRFAM7A-202ENST00000397827 IFRD2Q12894 506 aaPredicted RBP18.82■□□□□ 0.6
CHRFAM7A-202ENST00000397827 MARK2Q7KZI7 788 aaKnown RBP18.82■□□□□ 0.6
CHRFAM7A-202ENST00000397827 TRIM42Q8IWZ5 723 aa18.82■□□□□ 0.6
CHRFAM7A-202ENST00000397827 PCED1BQ96HM7 432 aa18.82■□□□□ 0.6
CHRFAM7A-202ENST00000397827 SMOQ99835 787 aa18.82■□□□□ 0.6
CHRFAM7A-202ENST00000397827 RHOBTB2Q9BYZ6 727 aa18.82■□□□□ 0.6
CHRFAM7A-202ENST00000397827 AP5M1Q9H0R1 490 aa18.82■□□□□ 0.6
CHRFAM7A-202ENST00000397827 GYG2O15488 501 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 CELF2O95319 508 aaKnown RBP18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 ESRRAP11474 423 aaPredicted RBP18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 NCAM1P13591 858 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 PGAM1P18669 254 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 AQP5P55064 265 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 PAFAH1B3Q15102 231 aaKnown RBP18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 DSTYKQ6XUX3 929 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 C3orf58Q8NDZ4 430 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 OR52K1Q8NGK4 314 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 ZFAND2BQ8WV99 257 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 CDKL2Q92772 493 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 TRIM4Q9C037 500 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 KLHL8Q9P2G9 620 aaPredicted RBP18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 SNX10Q9Y5X0 201 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 GSC2O15499 205 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 GSRP00390 522 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 RPL10AP62906 217 aaKnown RBP18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 CUL3Q13618 768 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 PDE1CQ14123 709 aaPredicted RBP18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 PPM1JQ5JR12 505 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 TIFABQ6ZNK6 161 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 CYS1Q717R9 158 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 ZMIZ2Q8NF64 920 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 FBXO41Q8TF61 875 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 EDEM1Q92611 657 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 LBHD1Q9BQE6 289 aaPredicted RBP18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 FERMT1Q9BQL6 677 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 WDR6Q9NNW5 1121 aaKnown RBP18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 EIF2B3Q9NR50 452 aaKnown RBP18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 MIOSQ9NXC5 875 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 KCNK4Q9NYG8 393 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 TAS2R1Q9NYW7 299 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 EMCNQ9ULC0 261 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 HNRNPCL1O60812 293 aaKnown RBP18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 KCNA4P22459 653 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 DAOAP59103 153 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 FASTKD1Q53R41 847 aaKnown RBP18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 N4BP2L1Q5TBK1 243 aaPredicted RBP18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 CRLF3Q8IUI8 442 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 TEX9Q8N6V9 391 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 NPWQ8N729 165 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 SYT15Q9BQS2 421 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 PAAF1Q9BRP4 392 aa18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 PPARGC1AQ9UBK2 798 aaKnown RBP18.81■□□□□ 0.6
CHRFAM7A-202ENST00000397827 LYPLA1O75608 230 aaPredicted RBP18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 CTSHP09668 335 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 IMPDH2P12268 514 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 CALB2P22676 271 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 PDE1BQ01064 536 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 STX3Q13277 289 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 FAM35AQ86V20 835 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 PPP1R14CQ8TAE6 165 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 ATXN7L3BQ96GX2 97 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 FCRL3Q96P31 734 aaPredicted RBP18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 TSPAN18Q96SJ8 248 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 DDIT4Q9NX09 232 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 SCN4AP35499 1836 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 TSC2P49815 1807 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 MYADML2A6NDP7 307 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 SNNO75324 88 aaPredicted RBP18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 ITGA2BP08514 1039 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 TPBGLP0DKB5 382 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 PTPN3P26045 913 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 CNTFP26441 200 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 MAGEA8P43361 318 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 TPI1P60174 286 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 MTA1Q13330 715 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 FSCN1Q16658 493 aaKnown RBP18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 ANO7Q6IWH7 933 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 C4orf50Q6ZRC1 276 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 RASSF3Q86WH2 238 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 TREML1Q86YW5 311 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 C2orf69Q8N8R5 385 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 EBF4Q9BQW3 602 aa18.8■□□□□ 0.6
CHRFAM7A-202ENST00000397827 ITM2AO43736 263 aa18.79■□□□□ 0.6
CHRFAM7A-202ENST00000397827 PURAQ00577 322 aaKnown RBP18.79■□□□□ 0.6
CHRFAM7A-202ENST00000397827 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.79■□□□□ 0.6
CHRFAM7A-202ENST00000397827 IGSF9Q9P2J2 1179 aa18.79■□□□□ 0.6
CHRFAM7A-202ENST00000397827 ST3GAL5Q9UNP4 418 aa18.79■□□□□ 0.6
CHRFAM7A-202ENST00000397827 HBS1LQ9Y450 684 aaKnown RBP18.79■□□□□ 0.6
CHRFAM7A-202ENST00000397827 CASTOR2A6NHX0 329 aa18.79■□□□□ 0.6
CHRFAM7A-202ENST00000397827 ENO1P06733 434 aaKnown RBP18.79■□□□□ 0.6
CHRFAM7A-202ENST00000397827 PDHA1P08559 390 aa18.79■□□□□ 0.6
CHRFAM7A-202ENST00000397827 KRT72Q14CN4 511 aa18.79■□□□□ 0.6
CHRFAM7A-202ENST00000397827 KHDC1Q4VXA5 237 aaKnown RBP18.79■□□□□ 0.6
CHRFAM7A-202ENST00000397827 WASHC2DQ5SRD0 308 aa18.79■□□□□ 0.6
CHRFAM7A-202ENST00000397827 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.79■□□□□ 0.6
CHRFAM7A-202ENST00000397827 MCUR1Q96AQ8 359 aa18.79■□□□□ 0.6
CHRFAM7A-202ENST00000397827 TUBB6Q9BUF5 446 aa18.79■□□□□ 0.6
CHRFAM7A-202ENST00000397827 FAM105AQ9NUU6 356 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms