RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 SFXN1Q9H9B4 322 aa20.04■□□□□ 0.8
PDLIM2-205ENST00000397761 ZDHHC18Q9NUE0 388 aa20.04■□□□□ 0.8
PDLIM2-205ENST00000397761 DONSONQ9NYP3 566 aa20.04■□□□□ 0.8
PDLIM2-205ENST00000397761 AGO1Q9UL18 857 aaKnown RBP20.04■□□□□ 0.8
PDLIM2-205ENST00000397761 ARHGAP26Q9UNA1 814 aa20.04■□□□□ 0.8
PDLIM2-205ENST00000397761 SNX24Q9Y343 169 aa20.04■□□□□ 0.8
PDLIM2-205ENST00000397761 DOCK8Q8NF50 2099 aa20.03■□□□□ 0.8
PDLIM2-205ENST00000397761 GFRA2O00451 464 aa20.03■□□□□ 0.8
PDLIM2-205ENST00000397761 PPP1R12AO14974 1030 aaPredicted RBP20.03■□□□□ 0.8
PDLIM2-205ENST00000397761 CKMP06732 381 aa20.03■□□□□ 0.8
PDLIM2-205ENST00000397761 GJA1P17302 382 aa20.03■□□□□ 0.8
PDLIM2-205ENST00000397761 MX2P20592 715 aa20.03■□□□□ 0.8
PDLIM2-205ENST00000397761 RBL1P28749 1068 aa20.03■□□□□ 0.8
PDLIM2-205ENST00000397761 IRAK1P51617 712 aa20.03■□□□□ 0.8
PDLIM2-205ENST00000397761 ZNF33AQ06730 810 aa20.03■□□□□ 0.8
PDLIM2-205ENST00000397761 PPIDQ08752 370 aaKnown RBP20.03■□□□□ 0.8
PDLIM2-205ENST00000397761 ZDHHC24Q6UX98 284 aa20.03■□□□□ 0.8
PDLIM2-205ENST00000397761 TP53INP2Q8IXH6 220 aa20.03■□□□□ 0.8
PDLIM2-205ENST00000397761 FAM71DQ8N9W8 422 aa20.03■□□□□ 0.8
PDLIM2-205ENST00000397761 TFB1MQ8WVM0 346 aaKnown RBP20.03■□□□□ 0.8
PDLIM2-205ENST00000397761 HDAC11Q96DB2 347 aa20.03■□□□□ 0.8
PDLIM2-205ENST00000397761 SNF8Q96H20 258 aa20.03■□□□□ 0.8
PDLIM2-205ENST00000397761 TRIM31Q9BZY9 425 aa20.03■□□□□ 0.8
PDLIM2-205ENST00000397761 SMPD4Q9NXE4 827 aa20.03■□□□□ 0.8
PDLIM2-205ENST00000397761 MPP6Q9NZW5 540 aa20.03■□□□□ 0.8
PDLIM2-205ENST00000397761 ASIC3Q9UHC3 531 aa20.03■□□□□ 0.8
PDLIM2-205ENST00000397761 NFU1Q9UMS0 254 aa20.03■□□□□ 0.8
PDLIM2-205ENST00000397761 GOLGA6L7A0A1B0GV03 622 aa20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 F5H5T6 163 aa20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 ZNF197O14709 1029 aa20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 SEC31AO94979 1220 aaKnown RBP20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 ETS1P14921 441 aa20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 ITIH2P19823 946 aa20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 TEAD2Q15562 447 aa20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 MAP9Q49MG5 647 aa20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 ARHGAP15Q53QZ3 475 aa20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 ALFQ53S48 1182 aa20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 BEND6Q5SZJ8 279 aaPredicted RBP20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 ZNF697Q5TEC3 545 aa20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 HTR3DQ70Z44 454 aa20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 GRASPQ7Z6J2 395 aaPredicted RBP20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 IFT81Q8WYA0 676 aa20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 ART4Q93070 314 aa20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 MYEOVQ96EZ4 313 aa20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 LGMNQ99538 433 aa20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 DDX50Q9BQ39 737 aaKnown RBP20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 NEUROG2Q9H2A3 272 aa20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 NSUN3Q9H649 340 aaKnown RBP20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 NOL6Q9H6R4 1146 aaKnown RBP20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 MYOFQ9NZM1 2061 aa20.02■□□□□ 0.8
PDLIM2-205ENST00000397761 KIF26AQ9ULI4 1882 aaPredicted RBP20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 CNTN5O94779 1100 aa20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 ZSCAN5DPP0CG00 497 aa20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 VAV1P15498 845 aa20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 RPL22P35268 128 aaKnown RBP20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 GARSP41250 739 aaKnown RBP20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 NDST2P52849 883 aa20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 TRIP13Q15645 432 aaPredicted RBP20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 P3H1Q32P28 736 aa20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 GPR158Q5T848 1215 aa20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 GPR153Q6NV75 609 aa20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 EMBQ6PCB8 327 aa20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 PRUNE1Q86TP1 453 aa20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 CMTM8Q8IZV2 173 aa20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 LGI2Q8N0V4 545 aa20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 EFHBQ8N7U6 833 aa20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 BBOF1Q8ND07 529 aa20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 SMG7Q92540 1137 aaKnown RBP20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 RPRD1AQ96P16 312 aaPredicted RBP20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 TSGA13Q96PP4 275 aa20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 ADAM7Q9H2U9 754 aa20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 NDFIP2Q9NV92 336 aa20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 LMCD1Q9NZU5 365 aa20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 DENND4AQ7Z401 1863 aa20.01■□□□□ 0.79
PDLIM2-205ENST00000397761 C5orf60A6NFR6 353 aa20■□□□□ 0.79
PDLIM2-205ENST00000397761 KCNN4O15554 427 aa20■□□□□ 0.79
PDLIM2-205ENST00000397761 GCATO75600 419 aa20■□□□□ 0.79
PDLIM2-205ENST00000397761 GLP2RO95838 553 aa20■□□□□ 0.79
PDLIM2-205ENST00000397761 IFNB1P01574 187 aa20■□□□□ 0.79
PDLIM2-205ENST00000397761 IRF1P10914 325 aa20■□□□□ 0.79
PDLIM2-205ENST00000397761 TCF3P15923 654 aa20■□□□□ 0.79
PDLIM2-205ENST00000397761 ADCY8P40145 1251 aa20■□□□□ 0.79
PDLIM2-205ENST00000397761 MAPKAPK2P49137 400 aa20■□□□□ 0.79
PDLIM2-205ENST00000397761 NTHL1P78549 312 aa20■□□□□ 0.79
PDLIM2-205ENST00000397761 HYAL1Q12794 435 aa20■□□□□ 0.79
PDLIM2-205ENST00000397761 HEATR6Q6AI08 1181 aaKnown RBP20■□□□□ 0.79
PDLIM2-205ENST00000397761 RHBDF2Q6PJF5 856 aa20■□□□□ 0.79
PDLIM2-205ENST00000397761 B4GALNT4Q76KP1 1039 aa20■□□□□ 0.79
PDLIM2-205ENST00000397761 LRRC49Q8IUZ0 686 aa20■□□□□ 0.79
PDLIM2-205ENST00000397761 GSPT2Q8IYD1 628 aaKnown RBP20■□□□□ 0.79
PDLIM2-205ENST00000397761 HTR3CQ8WXA8 447 aa20■□□□□ 0.79
PDLIM2-205ENST00000397761 PRICKLE1Q96MT3 831 aaPredicted RBP20■□□□□ 0.79
PDLIM2-205ENST00000397761 ZNF576Q9H609 170 aa20■□□□□ 0.79
PDLIM2-205ENST00000397761 ARFGAP3Q9NP61 516 aa20■□□□□ 0.79
PDLIM2-205ENST00000397761 ZNF510Q9Y2H8 683 aa20■□□□□ 0.79
PDLIM2-205ENST00000397761 REV3LO60673 3130 aa20■□□□□ 0.79
PDLIM2-205ENST00000397761 DNALI1O14645 258 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 WEE1P30291 646 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 CAV1Q03135 178 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms