RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 TSC22D2O75157 780 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 LYNP07948 512 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 NELFEP18615 380 aaKnown RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 SSTR1P30872 391 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 CYP2C18P33260 490 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 HTR7P34969 479 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 ALDH1A3P47895 512 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 HARS2P49590 506 aaKnown RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 NEDD8Q15843 81 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 FASTKD1Q53R41 847 aaKnown RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 SLC30A10Q6XR72 485 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 CATSPERGQ6ZRH7 1159 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 KIAA0408Q6ZU52 694 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 KLHDC8BQ8IXV7 354 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 EFCAB3Q8N7B9 438 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 HEXIM2Q96MH2 286 aaKnown RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 EPAS1Q99814 870 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 TRMOQ9BU70 441 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 NMUR2Q9GZQ4 415 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 COL1A2P08123 1366 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 PIK3R2O00459 728 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 UBA1P22314 1058 aaKnown RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 SESN2P58004 480 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 NAA20P61599 178 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 OGDHQ02218 1023 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 RIPOR1Q6ZS17 1223 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 SMIM5Q71RC9 77 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 LRRC49Q8IUZ0 686 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 CALML6Q8TD86 181 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 NTAN1Q96AB6 310 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 ACO2Q99798 780 aaKnown RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 NGRNQ9NPE2 291 aaKnown RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 DCDC2Q9UHG0 476 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 TDRKHQ9Y2W6 561 aaKnown RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 LINC00854A0A1B0GVQ3 168 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 ANGPT2O15123 496 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 RFPL1O75677 317 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 CABYRO75952 493 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 SLC4A1P02730 911 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 TFE3P19532 575 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 SLC25A3Q00325 362 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 LIN52Q52LA3 116 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 NAT14Q8WUY8 206 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 C17orf50Q8WW18 174 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 TMEM121Q9BTD3 319 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 ATAD3AQ9NVI7 634 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 STK39Q9UEW8 545 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 PADI4Q9UM07 663 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 UBR3Q6ZT12 1888 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 TCP10L2B9ZVM9 353 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 PTPRAP18433 802 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 CCR3P51677 355 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 ARHGDIAP52565 204 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 YWHAZP63104 245 aaKnown RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 MTERF2Q49AM1 385 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 KHDC1Q4VXA5 237 aaKnown RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 C2CD6Q53TS8 623 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 CPNE8Q86YQ8 564 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 CCDC117Q8IWD4 279 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 RNF148Q8N7C7 305 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 FAM71DQ8N9W8 422 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 ZSWIM2Q8NEG5 633 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 RFWD2Q8NHY2 731 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 NT5C1AQ9BXI3 368 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 MRPS26Q9BYN8 205 aaKnown RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 SMARCAD1Q9H4L7 1026 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 IGSF9Q9P2J2 1179 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 A0A0A0MRY4 1105 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 SLC15A5A6NIM6 579 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 TBC1D4O60343 1298 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 DDHD2O94830 711 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 CAPNS1P04632 268 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 CDH6P55285 790 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 RPL10AP62906 217 aaKnown RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 LPCAT4Q643R3 524 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 CROCCP3Q8IVE0 287 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 ADCY4Q8NFM4 1077 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 PTPRN2Q92932 1015 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 AZIN2Q96A70 460 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 SPATA13Q96N96 652 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 PHF12Q96QT6 1004 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 RAVER2Q9HCJ3 691 aaKnown RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 PICK1Q9NRD5 415 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 TMEM45AQ9NWC5 275 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 MYRFQ9Y2G1 1151 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 FAM237BA0A1B0GVD1 139 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 ZNF839A8K0R7 811 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 HNRNPCL2B2RXH8 293 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 PDLIM1O00151 329 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 CXCL11O14625 94 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 KCNN4O15554 427 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 SPRP35270 261 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 SLC26A3P40879 764 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 ACOT2P49753 483 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 NSUN2Q08J23 767 aaKnown RBP eCLIP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 BTG3Q14201 252 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 CNPY1Q3B7I2 92 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 CCDC153Q494R4 210 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 OR52E8Q6IFG1 317 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 HORMAD1Q86X24 394 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms