RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 LOXHD1Q8IVV2 1947 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 CCL22O00626 93 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 SCAMP3O14828 347 aaKnown RBP10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 OPHN1O60890 802 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 GCATO75600 419 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 CPA3P15088 417 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 TCN1P20061 433 aaPredicted RBP10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 SPRP35270 261 aaPredicted RBP10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 MSX2P35548 267 aaPredicted RBP10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 MAXP61244 160 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 GRB14Q14449 540 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 ZNF460Q14592 562 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 ARHGAP17Q68EM7 881 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 RGS9BPQ6ZS82 235 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 SMG8Q8ND04 991 aaKnown RBP10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 SLC7A6OSQ96CW6 309 aaPredicted RBP10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 FAM193BQ96PV7 902 aaPredicted RBP10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 ADAM2Q99965 735 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 RNPEPL1Q9HAU8 725 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 GTSE1Q9NYZ3 720 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 KIF13BQ9NQT8 1826 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 DOCK1Q14185 1865 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 RBBP6Q7Z6E9 1792 aaKnown RBP10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 TTC24A2A3L6 582 aaPredicted RBP10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 PIRO00625 290 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 DCXO43602 365 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 PGAM1P18669 254 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 PLK1P53350 603 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 CRYBB1P53674 252 aaPredicted RBP10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 TSPY1Q01534 308 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 ASPHQ12797 758 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 MPP3Q13368 585 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 PDCD2Q16342 344 aaPredicted RBP10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 STRADAQ7RTN6 431 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 CRYBG2Q8N1P7 616 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 FBXO27Q8NI29 283 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 MTBPQ96DY7 904 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 TMEM209Q96SK2 561 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 FICDQ9BVA6 458 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 LRRC40Q9H9A6 602 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 CHST12Q9NRB3 414 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 TAS2R1Q9NYW7 299 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 CNTN3Q9P232 1028 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 NUMBLQ9Y6R0 609 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 SCN1AP35498 2009 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 LRIG2O94898 1065 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 F2P00734 622 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 BPGMP07738 259 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 CALB2P22676 271 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 PCSK1P29120 753 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 PTDSS1P48651 473 aaKnown RBP10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 IRF9Q00978 393 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 PDE1CQ14123 709 aaPredicted RBP10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 PRKD1Q15139 912 aaPredicted RBP10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 PARP6Q2NL67 630 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 TIGD5Q53EQ6 642 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 KCNMB4Q86W47 210 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 SMOQ99835 787 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 KATNAL1Q9BW62 490 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 COLEC11Q9BWP8 271 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 YIPF3Q9GZM5 350 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 YY1AP1Q9H869 796 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 STOML1Q9UBI4 398 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 GOLGA8CPA6NN73 597 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 DPYSL4O14531 572 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 PTGESO14684 152 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 GSC2O15499 205 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 GLRA3O75311 464 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 GP5P40197 560 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 NEK3P51956 506 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 TCHHL1Q5QJ38 904 aaPredicted RBP10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 OVOS1Q6IE37 1185 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 ARHGAP36Q6ZRI8 547 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 STK32AQ8WU08 396 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 SPDL1Q96EA4 605 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 ZNF778Q96MU6 729 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 MIPEPQ99797 713 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 MAF1Q9H063 256 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 SNX15Q9NRS6 342 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 SLC38A7Q9NVC3 462 aa10.68□□□□□ -0.7
CPSF1P1-201ENST00000397477 ARL5CA6NH57 179 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 RGS2P41220 211 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 ITPRIPL1Q6GPH6 555 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 THEM5Q8N1Q8 247 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 RBM15BQ8NDT2 890 aaKnown RBP10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 WDR60Q8WVS4 1066 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 DNAJC9Q8WXX5 260 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 ELMO2Q96JJ3 720 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 HNRNPABQ99729 332 aaKnown RBP10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 C20orf27Q9GZN8 174 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 RBM22Q9NW64 420 aaKnown RBP eCLIP10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 RUVBL2Q9Y230 463 aaKnown RBP10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 COMMD10Q9Y6G5 202 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 DAB1O75553 588 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 USP1O94782 785 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 ENDOD1O94919 500 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 PTPN3P26045 913 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 GCKP35557 465 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 SOX11P35716 441 aa10.67□□□□□ -0.7
CPSF1P1-201ENST00000397477 CCR10P46092 362 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms