RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 CTNNBL1Q8WYA6 563 aaPredicted RBP26.13■■□□□ 1.77
TSPAN4-207ENST00000397411 NTAN1Q96AB6 310 aa26.13■■□□□ 1.77
TSPAN4-207ENST00000397411 NCAPGQ9BPX3 1015 aa26.13■■□□□ 1.77
TSPAN4-207ENST00000397411 OSBPL2Q9H1P3 480 aa26.13■■□□□ 1.77
TSPAN4-207ENST00000397411 TCRBV21S2A2A0A5A6 115 aa26.12■■□□□ 1.77
TSPAN4-207ENST00000397411 DRGXA6NNA5 263 aa26.12■■□□□ 1.77
TSPAN4-207ENST00000397411 WASH3PC4AMC7 463 aa26.12■■□□□ 1.77
TSPAN4-207ENST00000397411 AXIN1O15169 862 aa26.12■■□□□ 1.77
TSPAN4-207ENST00000397411 CNTN5O94779 1100 aa26.12■■□□□ 1.77
TSPAN4-207ENST00000397411 HOXC13P31276 330 aa26.12■■□□□ 1.77
TSPAN4-207ENST00000397411 CSKP41240 450 aa26.12■■□□□ 1.77
TSPAN4-207ENST00000397411 ST8SIA6P61647 398 aa26.12■■□□□ 1.77
TSPAN4-207ENST00000397411 FUT11Q495W5 492 aa26.12■■□□□ 1.77
TSPAN4-207ENST00000397411 C5orf22Q49AR2 442 aa26.12■■□□□ 1.77
TSPAN4-207ENST00000397411 PITRM1Q5JRX3 1037 aa26.12■■□□□ 1.77
TSPAN4-207ENST00000397411 RNF219Q5W0B1 726 aaPredicted RBP26.12■■□□□ 1.77
TSPAN4-207ENST00000397411 ANO7Q6IWH7 933 aa26.12■■□□□ 1.77
TSPAN4-207ENST00000397411 RWDD4Q6NW29 188 aaKnown RBP26.12■■□□□ 1.77
TSPAN4-207ENST00000397411 SERPINA13PQ6UXR4 307 aa26.12■■□□□ 1.77
TSPAN4-207ENST00000397411 TC2NQ8N9U0 490 aa26.12■■□□□ 1.77
TSPAN4-207ENST00000397411 FNIP1Q8TF40 1166 aa26.12■■□□□ 1.77
TSPAN4-207ENST00000397411 ERLEC1Q96DZ1 483 aa26.12■■□□□ 1.77
TSPAN4-207ENST00000397411 NUP85Q9BW27 656 aa26.12■■□□□ 1.77
TSPAN4-207ENST00000397411 ZYG11BQ9C0D3 744 aa26.12■■□□□ 1.77
TSPAN4-207ENST00000397411 MPP6Q9NZW5 540 aa26.12■■□□□ 1.77
TSPAN4-207ENST00000397411 ASLP04424 464 aa26.11■■□□□ 1.77
TSPAN4-207ENST00000397411 CYP1A2P05177 515 aa26.11■■□□□ 1.77
TSPAN4-207ENST00000397411 RHOCP08134 193 aa26.11■■□□□ 1.77
TSPAN4-207ENST00000397411 DLDP09622 509 aaKnown RBP26.11■■□□□ 1.77
TSPAN4-207ENST00000397411 NBL1P41271 181 aa26.11■■□□□ 1.77
TSPAN4-207ENST00000397411 IRAK1P51617 712 aa26.11■■□□□ 1.77
TSPAN4-207ENST00000397411 ASTE1Q2TB18 679 aaPredicted RBP26.11■■□□□ 1.77
TSPAN4-207ENST00000397411 ALFQ53S48 1182 aa26.11■■□□□ 1.77
TSPAN4-207ENST00000397411 WDR5BQ86VZ2 330 aa26.11■■□□□ 1.77
TSPAN4-207ENST00000397411 ZBTB44Q8NCP5 570 aa26.11■■□□□ 1.77
TSPAN4-207ENST00000397411 HMGB4Q8WW32 186 aa26.11■■□□□ 1.77
TSPAN4-207ENST00000397411 NELL1Q92832 810 aa26.11■■□□□ 1.77
TSPAN4-207ENST00000397411 TTC17Q96AE7 1141 aa26.11■■□□□ 1.77
TSPAN4-207ENST00000397411 LMLNQ96KR4 655 aa26.11■■□□□ 1.77
TSPAN4-207ENST00000397411 TRIM7Q9C029 511 aa26.11■■□□□ 1.77
TSPAN4-207ENST00000397411 SPTLC3Q9NUV7 552 aa26.11■■□□□ 1.77
TSPAN4-207ENST00000397411 CTTNBP2NLQ9P2B4 639 aa26.11■■□□□ 1.77
TSPAN4-207ENST00000397411 PCSK1NQ9UHG2 260 aa26.11■■□□□ 1.77
TSPAN4-207ENST00000397411 RAD54BQ9Y620 910 aa26.11■■□□□ 1.77
TSPAN4-207ENST00000397411 CACNA1HO95180 2353 aa26.11■■□□□ 1.77
TSPAN4-207ENST00000397411 CCDC163A0A0D9SF12 145 aa26.1■■□□□ 1.77
TSPAN4-207ENST00000397411 CHRM1P11229 460 aaPredicted RBP26.1■■□□□ 1.77
TSPAN4-207ENST00000397411 OR1E1P30953 314 aa26.1■■□□□ 1.77
TSPAN4-207ENST00000397411 IL12RB1P42701 662 aa26.1■■□□□ 1.77
TSPAN4-207ENST00000397411 AIF1P55008 147 aa26.1■■□□□ 1.77
TSPAN4-207ENST00000397411 TFAP2DQ7Z6R9 452 aa26.1■■□□□ 1.77
TSPAN4-207ENST00000397411 APCDD1Q8J025 514 aa26.1■■□□□ 1.77
TSPAN4-207ENST00000397411 GABRG3Q99928 467 aa26.1■■□□□ 1.77
TSPAN4-207ENST00000397411 MUC3BQ9H195 1237 aa26.1■■□□□ 1.77
TSPAN4-207ENST00000397411 SEMA4AQ9H3S1 761 aa26.1■■□□□ 1.77
TSPAN4-207ENST00000397411 IP6K2Q9UHH9 426 aa26.1■■□□□ 1.77
TSPAN4-207ENST00000397411 ANAPC7Q9UJX3 599 aa26.1■■□□□ 1.77
TSPAN4-207ENST00000397411 FZD10Q9ULW2 581 aa26.1■■□□□ 1.77
TSPAN4-207ENST00000397411 PRPSAP2O60256 369 aa26.09■■□□□ 1.77
TSPAN4-207ENST00000397411 EPHX1P07099 455 aa26.09■■□□□ 1.77
TSPAN4-207ENST00000397411 MZF1P28698 734 aaPredicted RBP26.09■■□□□ 1.77
TSPAN4-207ENST00000397411 CNR2P34972 360 aa26.09■■□□□ 1.77
TSPAN4-207ENST00000397411 NNMTP40261 264 aa26.09■■□□□ 1.77
TSPAN4-207ENST00000397411 PIGHQ14442 188 aaPredicted RBP26.09■■□□□ 1.77
TSPAN4-207ENST00000397411 PLEKHG6Q3KR16 790 aa26.09■■□□□ 1.77
TSPAN4-207ENST00000397411 C6orf118Q5T5N4 469 aa26.09■■□□□ 1.77
TSPAN4-207ENST00000397411 CEP68Q76N32 757 aa26.09■■□□□ 1.77
TSPAN4-207ENST00000397411 ZNF683Q8IZ20 524 aa26.09■■□□□ 1.77
TSPAN4-207ENST00000397411 NKD2Q969F2 451 aaPredicted RBP26.09■■□□□ 1.77
TSPAN4-207ENST00000397411 TBC1D31Q96DN5 1066 aa26.09■■□□□ 1.77
TSPAN4-207ENST00000397411 ARHGEF26Q96DR7 871 aa26.09■■□□□ 1.77
TSPAN4-207ENST00000397411 PPARGC1AQ9UBK2 798 aaKnown RBP26.09■■□□□ 1.77
TSPAN4-207ENST00000397411 EBF1Q9UH73 591 aa26.09■■□□□ 1.77
TSPAN4-207ENST00000397411 VPS28Q9UK41 221 aa26.09■■□□□ 1.77
TSPAN4-207ENST00000397411 INTS6Q9UL03 887 aaKnown RBP26.09■■□□□ 1.77
TSPAN4-207ENST00000397411 IGLV3-10A0A075B6K4 115 aa26.08■■□□□ 1.77
TSPAN4-207ENST00000397411 MYO1FO00160 1098 aa26.08■■□□□ 1.77
TSPAN4-207ENST00000397411 NUMBP49757 651 aa26.08■■□□□ 1.77
TSPAN4-207ENST00000397411 ECT2LQ008S8 904 aa26.08■■□□□ 1.77
TSPAN4-207ENST00000397411 NRG1Q02297 640 aaPredicted RBP26.08■■□□□ 1.77
TSPAN4-207ENST00000397411 SULT2A1Q06520 285 aa26.08■■□□□ 1.77
TSPAN4-207ENST00000397411 SCAPQ12770 1279 aa26.08■■□□□ 1.77
TSPAN4-207ENST00000397411 ACAP1Q15027 740 aa26.08■■□□□ 1.77
TSPAN4-207ENST00000397411 CXorf57Q6NSI4 855 aaKnown RBP26.08■■□□□ 1.77
TSPAN4-207ENST00000397411 PHOX2BQ99453 314 aa26.08■■□□□ 1.77
TSPAN4-207ENST00000397411 EPAS1Q99814 870 aa26.08■■□□□ 1.77
TSPAN4-207ENST00000397411 FEM1AQ9BSK4 669 aa26.08■■□□□ 1.77
TSPAN4-207ENST00000397411 MAGEB5Q9BZ81 275 aa26.08■■□□□ 1.77
TSPAN4-207ENST00000397411 TPSD1Q9BZJ3 242 aa26.08■■□□□ 1.77
TSPAN4-207ENST00000397411 SUN2Q9UH99 717 aa26.08■■□□□ 1.77
TSPAN4-207ENST00000397411 RAB23Q9ULC3 237 aa26.08■■□□□ 1.77
TSPAN4-207ENST00000397411 NENFQ9UMX5 172 aa26.08■■□□□ 1.77
TSPAN4-207ENST00000397411 ERVW-1Q9UQF0 538 aa26.08■■□□□ 1.77
TSPAN4-207ENST00000397411 TBC1D30Q9Y2I9 924 aa26.08■■□□□ 1.77
TSPAN4-207ENST00000397411 A0A1W2PQF6 199 aa26.07■■□□□ 1.76
TSPAN4-207ENST00000397411 GOLGA6L6A8MZA4 724 aa26.07■■□□□ 1.76
TSPAN4-207ENST00000397411 CREB3O43889 395 aa26.07■■□□□ 1.76
TSPAN4-207ENST00000397411 MIPP30301 263 aa26.07■■□□□ 1.76
TSPAN4-207ENST00000397411 L1CAMP32004 1257 aa26.07■■□□□ 1.76
TSPAN4-207ENST00000397411 PLA2G5P39877 138 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms