RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 LAMP2P13473 410 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 TCF3P15923 654 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 FSHRP23945 695 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 WEE1P30291 646 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 GBP2P32456 591 aaPredicted RBP17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 OTUD4Q01804 1114 aaKnown RBP17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 TDGQ13569 410 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 PAFAH1B3Q15102 231 aaKnown RBP17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 CCNG2Q16589 344 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 C5orf22Q49AR2 442 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 ADGRF1Q5T601 910 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 CWF19L1Q69YN2 538 aaKnown RBP17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 FBXL22Q6P050 247 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 TTC27Q6P3X3 843 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 HTR3DQ70Z44 454 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 GET4Q7L5D6 327 aaPredicted RBP17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 DDX42Q86XP3 938 aaKnown RBP eCLIP17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 KLHL7Q8IXQ5 586 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 FAM217AQ8IXS0 508 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 SLC44A3Q8N4M1 653 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 TTC13Q8NBP0 860 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 ACTL9Q8TC94 416 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 USP13Q92995 863 aaPredicted RBP17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 IGSF8Q969P0 613 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 HAUS1Q96CS2 278 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 MYEOVQ96EZ4 313 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 FAM118BQ9BPY3 351 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 HOMER3Q9NSC5 361 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 TDP1Q9NUW8 608 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 DUSP12Q9UNI6 340 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 CHD5Q8TDI0 1954 aa17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 KIF26AQ9ULI4 1882 aaPredicted RBP17.44■□□□□ 0.38
TSPAN4-205ENST00000397406 FGF10O15520 208 aaPredicted RBP17.43■□□□□ 0.38
TSPAN4-205ENST00000397406 LIASO43766 372 aa17.43■□□□□ 0.38
TSPAN4-205ENST00000397406 CHRNA3P32297 505 aa17.43■□□□□ 0.38
TSPAN4-205ENST00000397406 IRAK1P51617 712 aa17.43■□□□□ 0.38
TSPAN4-205ENST00000397406 GBE1Q04446 702 aa17.43■□□□□ 0.38
TSPAN4-205ENST00000397406 SLC10A2Q12908 348 aaPredicted RBP17.43■□□□□ 0.38
TSPAN4-205ENST00000397406 NOMO1Q15155 1222 aa17.43■□□□□ 0.38
TSPAN4-205ENST00000397406 RWDD4Q6NW29 188 aaKnown RBP17.43■□□□□ 0.38
TSPAN4-205ENST00000397406 C1orf228Q6PIY5 440 aa17.43■□□□□ 0.38
TSPAN4-205ENST00000397406 LRRC31Q6UY01 552 aa17.43■□□□□ 0.38
TSPAN4-205ENST00000397406 NPAS3Q8IXF0 933 aa17.43■□□□□ 0.38
TSPAN4-205ENST00000397406 RIN3Q8TB24 985 aa17.43■□□□□ 0.38
TSPAN4-205ENST00000397406 SLC35B2Q8TB61 432 aa17.43■□□□□ 0.38
TSPAN4-205ENST00000397406 SH3RF2Q8TEC5 729 aa17.43■□□□□ 0.38
TSPAN4-205ENST00000397406 MAGOHBQ96A72 148 aaKnown RBP17.43■□□□□ 0.38
TSPAN4-205ENST00000397406 KRT12Q99456 494 aa17.43■□□□□ 0.38
TSPAN4-205ENST00000397406 FRMD8P1Q9BZ68 369 aaPredicted RBP17.43■□□□□ 0.38
TSPAN4-205ENST00000397406 STIM2Q9P246 746 aa17.43■□□□□ 0.38
TSPAN4-205ENST00000397406 LSM7Q9UK45 103 aaKnown RBP17.43■□□□□ 0.38
TSPAN4-205ENST00000397406 NYNRINQ9P2P1 1898 aaKnown RBP17.43■□□□□ 0.38
TSPAN4-205ENST00000397406 E2F8A0AVK6 867 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 WASH4PA8MWX3 477 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 F5H5T6 163 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 GFRA2O00451 464 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 PI15O43692 258 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 MFSD11O43934 449 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 COILP38432 576 aaPredicted RBP17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 FNTAP49354 379 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 USP4Q13107 963 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 SNX1Q13596 522 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 HTR4Q13639 388 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 ZNF77Q15935 545 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 RFWD3Q6PCD5 774 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 DRICH1Q6PGQ1 229 aaPredicted RBP17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 TMCO3Q6UWJ1 677 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 NLRP14Q86W24 1093 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 ARID3BQ8IVW6 561 aaPredicted RBP17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 SUGP1Q8IWZ8 645 aaKnown RBP17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 LGI2Q8N0V4 545 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 MYRIPQ8NFW9 859 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 ZSCAN18Q8TBC5 510 aaPredicted RBP17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 P3H4Q92791 437 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 PRICKLE1Q96MT3 831 aaPredicted RBP17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 ZYG11BQ9C0D3 744 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 KLC2Q9H0B6 622 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 CATSPERBQ9H7T0 1116 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 DTLQ9NZJ0 730 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 MPP6Q9NZW5 540 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 IGSF9Q9P2J2 1179 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 DNPEPQ9ULA0 475 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 ZNF510Q9Y2H8 683 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 SH3BP1Q9Y3L3 701 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 SHROOM3Q8TF72 1996 aa17.42■□□□□ 0.38
TSPAN4-205ENST00000397406 KRBA1A5PL33 1030 aa17.41■□□□□ 0.38
TSPAN4-205ENST00000397406 SCAMP3O14828 347 aaKnown RBP17.41■□□□□ 0.38
TSPAN4-205ENST00000397406 CNTN5O94779 1100 aa17.41■□□□□ 0.38
TSPAN4-205ENST00000397406 RHOQP17081 205 aa17.41■□□□□ 0.38
TSPAN4-205ENST00000397406 NR2C2P49116 596 aa17.41■□□□□ 0.38
TSPAN4-205ENST00000397406 OASLQ15646 514 aaKnown RBP17.41■□□□□ 0.38
TSPAN4-205ENST00000397406 ALFQ53S48 1182 aa17.41■□□□□ 0.38
TSPAN4-205ENST00000397406 TEX35Q5T0J7 233 aa17.41■□□□□ 0.38
TSPAN4-205ENST00000397406 CCDC137Q6PK04 289 aaKnown RBP17.41■□□□□ 0.38
TSPAN4-205ENST00000397406 PARM1Q6UWI2 310 aa17.41■□□□□ 0.38
TSPAN4-205ENST00000397406 BBS7Q8IWZ6 715 aa17.41■□□□□ 0.38
TSPAN4-205ENST00000397406 NPWQ8N729 165 aa17.41■□□□□ 0.38
TSPAN4-205ENST00000397406 RTL3Q8N8U3 475 aaKnown RBP17.41■□□□□ 0.38
TSPAN4-205ENST00000397406 FGF13Q92913 245 aa17.41■□□□□ 0.38
TSPAN4-205ENST00000397406 FGF14Q92915 247 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms