RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 TRIP13Q15645 432 aaPredicted RBP15.37■□□□□ 0.05
CAPN3-207ENST00000397200 SMTNL2Q2TAL5 461 aa15.37■□□□□ 0.05
CAPN3-207ENST00000397200 FAM131BQ86XD5 332 aa15.37■□□□□ 0.05
CAPN3-207ENST00000397200 CMTM8Q8IZV2 173 aa15.37■□□□□ 0.05
CAPN3-207ENST00000397200 ZCCHC9Q8N567 271 aaKnown RBP15.37■□□□□ 0.05
CAPN3-207ENST00000397200 TEKT4Q8WW24 435 aa15.37■□□□□ 0.05
CAPN3-207ENST00000397200 NECTIN4Q96NY8 510 aa15.37■□□□□ 0.05
CAPN3-207ENST00000397200 ROPN1BQ9BZX4 212 aaPredicted RBP15.37■□□□□ 0.05
CAPN3-207ENST00000397200 PHACTR1Q9C0D0 580 aa15.37■□□□□ 0.05
CAPN3-207ENST00000397200 WDCPQ9H6R7 721 aa15.37■□□□□ 0.05
CAPN3-207ENST00000397200 ROPN1Q9HAT0 212 aaPredicted RBP15.37■□□□□ 0.05
CAPN3-207ENST00000397200 PCSK1NQ9UHG2 260 aa15.37■□□□□ 0.05
CAPN3-207ENST00000397200 DENND4AQ7Z401 1863 aa15.37■□□□□ 0.05
CAPN3-207ENST00000397200 NUP210Q8TEM1 1887 aaPredicted RBP15.37■□□□□ 0.05
CAPN3-207ENST00000397200 BRWD1Q9NSI6 2320 aa15.37■□□□□ 0.05
CAPN3-207ENST00000397200 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.36■□□□□ 0.05
CAPN3-207ENST00000397200 APOC4-APOC2K7ER74 178 aa15.36■□□□□ 0.05
CAPN3-207ENST00000397200 APOC2P02655 101 aa15.36■□□□□ 0.05
CAPN3-207ENST00000397200 CD48P09326 243 aa15.36■□□□□ 0.05
CAPN3-207ENST00000397200 SLC2A3P11169 496 aa15.36■□□□□ 0.05
CAPN3-207ENST00000397200 CCR1P32246 355 aa15.36■□□□□ 0.05
CAPN3-207ENST00000397200 MDH1P40925 334 aaKnown RBP15.36■□□□□ 0.05
CAPN3-207ENST00000397200 ATP1A2P50993 1020 aa15.36■□□□□ 0.05
CAPN3-207ENST00000397200 PPP2R2AP63151 447 aa15.36■□□□□ 0.05
CAPN3-207ENST00000397200 SLC7A9P82251 487 aa15.36■□□□□ 0.05
CAPN3-207ENST00000397200 OTUD4Q01804 1114 aaKnown RBP15.36■□□□□ 0.05
CAPN3-207ENST00000397200 EIF4EBP2Q13542 120 aaPredicted RBP15.36■□□□□ 0.05
CAPN3-207ENST00000397200 ZC3H12AQ5D1E8 599 aaKnown RBP15.36■□□□□ 0.05
CAPN3-207ENST00000397200 DNAJC21Q5F1R6 531 aaKnown RBP15.36■□□□□ 0.05
CAPN3-207ENST00000397200 KCNT1Q5JUK3 1230 aa15.36■□□□□ 0.05
CAPN3-207ENST00000397200 NPAS3Q8IXF0 933 aa15.36■□□□□ 0.05
CAPN3-207ENST00000397200 GLIS1Q8NBF1 620 aa15.36■□□□□ 0.05
CAPN3-207ENST00000397200 ACTL9Q8TC94 416 aa15.36■□□□□ 0.05
CAPN3-207ENST00000397200 HLA-CQ95604 372 aa15.36■□□□□ 0.05
CAPN3-207ENST00000397200 KLF16Q9BXK1 252 aaPredicted RBP15.36■□□□□ 0.05
CAPN3-207ENST00000397200 SMPD4Q9NXE4 827 aa15.36■□□□□ 0.05
CAPN3-207ENST00000397200 ZNF148Q9UQR1 794 aa15.36■□□□□ 0.05
CAPN3-207ENST00000397200 CPQQ9Y646 472 aa15.36■□□□□ 0.05
CAPN3-207ENST00000397200 CST8O60676 142 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 TCEA3O75764 348 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 TTC4O95801 387 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 APOEP02649 317 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 RING1Q06587 406 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 PPP2R5DQ14738 602 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 CBX2Q14781 532 aaPredicted RBP15.35■□□□□ 0.05
CAPN3-207ENST00000397200 MORF4L2Q15014 288 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 P3H1Q32P28 736 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 ARL13BQ3SXY8 428 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 BRMS1LQ5PSV4 323 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 C6orf118Q5T5N4 469 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 GSTA5Q7RTV2 222 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 FGF13Q92913 245 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 PLD4Q96BZ4 506 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 SLC39A13Q96H72 371 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 FCRL2Q96LA5 508 aaPredicted RBP15.35■□□□□ 0.05
CAPN3-207ENST00000397200 GKN1Q9NS71 199 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 GDE1Q9NZC3 331 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 NOVA2Q9UNW9 492 aaKnown RBP15.35■□□□□ 0.05
CAPN3-207ENST00000397200 SHOC2Q9UQ13 582 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 USP15Q9Y4E8 981 aaPredicted RBP15.35■□□□□ 0.05
CAPN3-207ENST00000397200 AGTP01019 485 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 IGLV3-27P01718 113 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 ABHD2P08910 425 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 IRF1P10914 325 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 VPS41P49754 854 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 HNRNPH2P55795 449 aaKnown RBP15.35■□□□□ 0.05
CAPN3-207ENST00000397200 MAGOHP61326 146 aaKnown RBP15.35■□□□□ 0.05
CAPN3-207ENST00000397200 DPYSL3Q14195 570 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 BOLA3Q53S33 107 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 RNASEH2BQ5TBB1 312 aaKnown RBP15.35■□□□□ 0.05
CAPN3-207ENST00000397200 NUGGCQ68CJ6 796 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 CCDC25Q86WR0 208 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 UNC45BQ8IWX7 931 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 CCDC185Q8N715 623 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 KCTD6Q8NC69 237 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 ZSCAN18Q8TBC5 510 aaPredicted RBP15.35■□□□□ 0.05
CAPN3-207ENST00000397200 SUSD6Q92537 303 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 NTAN1Q96AB6 310 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 ZFRQ96KR1 1074 aaKnown RBP15.35■□□□□ 0.05
CAPN3-207ENST00000397200 ZSWIM3Q96MP5 696 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 TKTL2Q9H0I9 626 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 SMG9Q9H0W8 520 aaKnown RBP15.35■□□□□ 0.05
CAPN3-207ENST00000397200 CENPHQ9H3R5 247 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 POMKQ9H5K3 350 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 NINJ2Q9NZG7 142 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 ARHGAP26Q9UNA1 814 aa15.35■□□□□ 0.05
CAPN3-207ENST00000397200 FARP1Q9Y4F1 1045 aaPredicted RBP15.35■□□□□ 0.05
CAPN3-207ENST00000397200 STC2O76061 302 aa15.34■□□□□ 0.05
CAPN3-207ENST00000397200 MOCS2O96007 188 aaPredicted RBP15.34■□□□□ 0.05
CAPN3-207ENST00000397200 LSP1P33241 339 aa15.34■□□□□ 0.05
CAPN3-207ENST00000397200 HARS2P49590 506 aaKnown RBP15.34■□□□□ 0.05
CAPN3-207ENST00000397200 KCNQ1P51787 676 aa15.34■□□□□ 0.05
CAPN3-207ENST00000397200 AIF1P55008 147 aa15.34■□□□□ 0.05
CAPN3-207ENST00000397200 SMAD4Q13485 552 aaKnown RBP15.34■□□□□ 0.05
CAPN3-207ENST00000397200 PDK2Q15119 407 aa15.34■□□□□ 0.05
CAPN3-207ENST00000397200 NOMO1Q15155 1222 aa15.34■□□□□ 0.05
CAPN3-207ENST00000397200 ERMARDQ5T6L9 678 aa15.34■□□□□ 0.05
CAPN3-207ENST00000397200 ATP6V0D2Q8N8Y2 350 aa15.34■□□□□ 0.05
CAPN3-207ENST00000397200 TTC16Q8NEE8 873 aa15.34■□□□□ 0.05
CAPN3-207ENST00000397200 HAUS1Q96CS2 278 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms