RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 SLITRK6Q9H5Y7 841 aa13.69□□□□□ -0.22
SEC13-209ENST00000397117 WDCPQ9H6R7 721 aa13.69□□□□□ -0.22
SEC13-209ENST00000397117 SFMBT1Q9UHJ3 866 aa13.69□□□□□ -0.22
SEC13-209ENST00000397117 AP4E1Q9UPM8 1137 aa13.69□□□□□ -0.22
SEC13-209ENST00000397117 MYO16Q9Y6X6 1858 aa13.69□□□□□ -0.22
SEC13-209ENST00000397117 DENND4CQ5VZ89 1909 aa13.69□□□□□ -0.22
SEC13-209ENST00000397117 EML5Q05BV3 1969 aa13.69□□□□□ -0.22
SEC13-209ENST00000397117 ZNF840PA6NDX5 716 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 KRIT1O00522 736 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 IRAK2O43187 625 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 CTHP32929 405 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 CXCR3P49682 368 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 CCINQ13939 588 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 LLGL1Q15334 1064 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 TFDP3Q5H9I0 405 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 HECTD3Q5T447 861 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 STXBP5Q5T5C0 1151 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 SNX30Q5VWJ9 437 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 MFSD7Q6UXD7 560 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 CYP4V2Q6ZWL3 525 aaPredicted RBP13.68□□□□□ -0.22
SEC13-209ENST00000397117 GAREM2Q75VX8 874 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 ADAT2Q7Z6V5 191 aaKnown RBP13.68□□□□□ -0.22
SEC13-209ENST00000397117 SLC13A5Q86YT5 568 aaPredicted RBP13.68□□□□□ -0.22
SEC13-209ENST00000397117 MAIP1Q8WWC4 291 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 MAK16Q9BXY0 300 aaKnown RBP13.68□□□□□ -0.22
SEC13-209ENST00000397117 OSBPL8Q9BZF1 889 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 DHX35Q9H5Z1 703 aaKnown RBP13.68□□□□□ -0.22
SEC13-209ENST00000397117 GPATCH2LQ9NWQ4 482 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 TM4SF5O14894 197 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 CTIFO43310 598 aaKnown RBP13.68□□□□□ -0.22
SEC13-209ENST00000397117 MSI1O43347 362 aaKnown RBP13.68□□□□□ -0.22
SEC13-209ENST00000397117 TJP3O95049 919 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 TBX18O95935 607 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 IGLV3-25P01717 112 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 SLC2A3P11169 496 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 WEE1P30291 646 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 CCR1P32246 355 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 PTPN7P35236 360 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 ATP5C1P36542 298 aaKnown RBP13.68□□□□□ -0.22
SEC13-209ENST00000397117 LIMK1P53667 647 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 ZC3H12AQ5D1E8 599 aaKnown RBP13.68□□□□□ -0.22
SEC13-209ENST00000397117 PPP6R3Q5H9R7 873 aaPredicted RBP13.68□□□□□ -0.22
SEC13-209ENST00000397117 BRMS1LQ5PSV4 323 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 KAZNQ674X7 775 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 ZNF572Q7Z3I7 529 aaPredicted RBP13.68□□□□□ -0.22
SEC13-209ENST00000397117 MIB1Q86YT6 1006 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 SYNPOQ8N3V7 929 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 ZNF276Q8N554 614 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 SPATA4Q8NEY3 305 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 NTAN1Q96AB6 310 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 ZFYVE19Q96K21 471 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 GCNAQ96QF7 691 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 HEMGNQ9BXL5 484 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 AP1M1Q9BXS5 423 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 TKTL2Q9H0I9 626 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 CCSER2Q9H7U1 834 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 OBP2AQ9NY56 170 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 GTSE1Q9NYZ3 720 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 MARCH2Q9P0N8 246 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 RASAL2Q9UJF2 1139 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 DNMT3LQ9UJW3 386 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 FZD10Q9ULW2 581 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 TLR6Q9Y2C9 796 aa13.68□□□□□ -0.22
SEC13-209ENST00000397117 ZNF638Q14966 1978 aaKnown RBP13.67□□□□□ -0.22
SEC13-209ENST00000397117 UQCRHLA0A096LP55 91 aa13.67□□□□□ -0.22
SEC13-209ENST00000397117 C3orf70A6NLC5 250 aaPredicted RBP13.67□□□□□ -0.22
SEC13-209ENST00000397117 UQCRHP07919 91 aa13.67□□□□□ -0.22
SEC13-209ENST00000397117 ADRA1BP35368 520 aa13.67□□□□□ -0.22
SEC13-209ENST00000397117 CDKN2BP42772 138 aa13.67□□□□□ -0.22
SEC13-209ENST00000397117 TUBP50607 506 aa13.67□□□□□ -0.22
SEC13-209ENST00000397117 TBX4P57082 545 aa13.67□□□□□ -0.22
SEC13-209ENST00000397117 NNTQ13423 1086 aa13.67□□□□□ -0.22
SEC13-209ENST00000397117 DPYSL3Q14195 570 aa13.67□□□□□ -0.22
SEC13-209ENST00000397117 PON2Q15165 354 aa13.67□□□□□ -0.22
SEC13-209ENST00000397117 PPP2R5EQ16537 467 aa13.67□□□□□ -0.22
SEC13-209ENST00000397117 DPYSL2Q16555 572 aa13.67□□□□□ -0.22
SEC13-209ENST00000397117 CEP68Q76N32 757 aa13.67□□□□□ -0.22
SEC13-209ENST00000397117 TTC8Q8TAM2 541 aa13.67□□□□□ -0.22
SEC13-209ENST00000397117 CACNA1GO43497 2377 aa13.66□□□□□ -0.22
SEC13-209ENST00000397117 hCG_1818297A0A087WSY0 165 aa13.66□□□□□ -0.22
SEC13-209ENST00000397117 SLC12A8A0AV02 714 aa13.66□□□□□ -0.22
SEC13-209ENST00000397117 EFCAB8A8MWE9 144 aa13.66□□□□□ -0.22
SEC13-209ENST00000397117 FGF19O95750 216 aa13.66□□□□□ -0.22
SEC13-209ENST00000397117 APOEP02649 317 aa13.66□□□□□ -0.22
SEC13-209ENST00000397117 CD48P09326 243 aa13.66□□□□□ -0.22
SEC13-209ENST00000397117 KRT10P13645 584 aa13.66□□□□□ -0.22
SEC13-209ENST00000397117 CDC25CP30307 473 aa13.66□□□□□ -0.22
SEC13-209ENST00000397117 L1CAMP32004 1257 aa13.66□□□□□ -0.22
SEC13-209ENST00000397117 ARL4AP40617 200 aa13.66□□□□□ -0.22
SEC13-209ENST00000397117 TUBB4BP68371 445 aa13.66□□□□□ -0.22
SEC13-209ENST00000397117 C2orf54Q08AI8 447 aa13.66□□□□□ -0.22
SEC13-209ENST00000397117 SCAPQ12770 1279 aa13.66□□□□□ -0.22
SEC13-209ENST00000397117 CA9Q16790 459 aa13.66□□□□□ -0.22
SEC13-209ENST00000397117 N4BP2L1Q5TBK1 243 aaPredicted RBP13.66□□□□□ -0.22
SEC13-209ENST00000397117 KLHDC10Q6PID8 442 aa13.66□□□□□ -0.22
SEC13-209ENST00000397117 RFX6Q8HWS3 928 aa13.66□□□□□ -0.22
SEC13-209ENST00000397117 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.66□□□□□ -0.22
SEC13-209ENST00000397117 MRPS31Q92665 395 aaKnown RBP13.66□□□□□ -0.22
SEC13-209ENST00000397117 LOXL4Q96JB6 756 aa13.66□□□□□ -0.22
SEC13-209ENST00000397117 PCDH18Q9HCL0 1135 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms