RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 CENPCQ03188 943 aa15.03■□□□□ -0
SEC13-208ENST00000397109 LMAN2Q12907 356 aa15.03■□□□□ -0
SEC13-208ENST00000397109 SLC12A1Q13621 1099 aa15.03■□□□□ -0
SEC13-208ENST00000397109 CLEC16AQ2KHT3 1053 aa15.03■□□□□ -0
SEC13-208ENST00000397109 C2CD6Q53TS8 623 aa15.03■□□□□ -0
SEC13-208ENST00000397109 PRR23CQ6ZRP0 262 aa15.03■□□□□ -0
SEC13-208ENST00000397109 MMS22LQ6ZRQ5 1243 aa15.03■□□□□ -0
SEC13-208ENST00000397109 CCAR2Q8N163 923 aaKnown RBP15.03■□□□□ -0
SEC13-208ENST00000397109 CYB5D2Q8WUJ1 264 aa15.03■□□□□ -0
SEC13-208ENST00000397109 SYN2Q92777 582 aaPredicted RBP15.03■□□□□ -0
SEC13-208ENST00000397109 AGPAT1Q99943 283 aa15.03■□□□□ -0
SEC13-208ENST00000397109 TMEM245Q9H330 911 aa15.03■□□□□ -0
SEC13-208ENST00000397109 FBRSQ9HAH7 460 aa15.03■□□□□ -0
SEC13-208ENST00000397109 PRDM16Q9HAZ2 1276 aa15.03■□□□□ -0
SEC13-208ENST00000397109 VPS45Q9NRW7 570 aa15.03■□□□□ -0
SEC13-208ENST00000397109 PIGVQ9NUD9 493 aa15.03■□□□□ -0
SEC13-208ENST00000397109 ARHGEF38Q9NXL2 777 aa15.03■□□□□ -0
SEC13-208ENST00000397109 AIPL1Q9NZN9 384 aa15.03■□□□□ -0
SEC13-208ENST00000397109 SUN2Q9UH99 717 aa15.03■□□□□ -0
SEC13-208ENST00000397109 CKAP5Q14008 2032 aa15.03■□□□□ -0
SEC13-208ENST00000397109 A0A1B0GVM2 712 aa15.02■□□□□ -0
SEC13-208ENST00000397109 TCAF2A6NFQ2 919 aa15.02■□□□□ -0
SEC13-208ENST00000397109 PAGE1O75459 146 aa15.02■□□□□ -0
SEC13-208ENST00000397109 CALB1P05937 261 aa15.02■□□□□ -0
SEC13-208ENST00000397109 PRKCHP24723 683 aa15.02■□□□□ -0
SEC13-208ENST00000397109 HNRNPH3P31942 346 aaKnown RBP15.02■□□□□ -0
SEC13-208ENST00000397109 FLT3P36888 993 aa15.02■□□□□ -0
SEC13-208ENST00000397109 MPLP40238 635 aa15.02■□□□□ -0
SEC13-208ENST00000397109 DPP6P42658 865 aa15.02■□□□□ -0
SEC13-208ENST00000397109 ST8SIA6P61647 398 aa15.02■□□□□ -0
SEC13-208ENST00000397109 CREB5Q02930 508 aa15.02■□□□□ -0
SEC13-208ENST00000397109 CAMK2GQ13555 558 aaPredicted RBP15.02■□□□□ -0
SEC13-208ENST00000397109 AUHQ13825 339 aaKnown RBP15.02■□□□□ -0
SEC13-208ENST00000397109 PLA2G2CQ5R387 149 aa15.02■□□□□ -0
SEC13-208ENST00000397109 OTUD1Q5VV17 481 aaPredicted RBP15.02■□□□□ -0
SEC13-208ENST00000397109 FBXL22Q6P050 247 aa15.02■□□□□ -0
SEC13-208ENST00000397109 KIAA1324Q6UXG2 1013 aaKnown RBP15.02■□□□□ -0
SEC13-208ENST00000397109 PHF13Q86YI8 300 aaPredicted RBP15.02■□□□□ -0
SEC13-208ENST00000397109 TMPRSS6Q8IU80 811 aa15.02■□□□□ -0
SEC13-208ENST00000397109 KDM1BQ8NB78 822 aa15.02■□□□□ -0
SEC13-208ENST00000397109 SLC30A5Q8TAD4 765 aa15.02■□□□□ -0
SEC13-208ENST00000397109 RPRD1AQ96P16 312 aaPredicted RBP15.02■□□□□ -0
SEC13-208ENST00000397109 PCDHB18PQ96TA0 734 aa15.02■□□□□ -0
SEC13-208ENST00000397109 TBCBQ99426 244 aa15.02■□□□□ -0
SEC13-208ENST00000397109 C11orf70Q9BRQ4 267 aa15.02■□□□□ -0
SEC13-208ENST00000397109 TKTL2Q9H0I9 626 aa15.02■□□□□ -0
SEC13-208ENST00000397109 SEPT11Q9NVA2 429 aaKnown RBP15.02■□□□□ -0
SEC13-208ENST00000397109 ADAM22Q9P0K1 906 aa15.02■□□□□ -0
SEC13-208ENST00000397109 MBD1Q9UIS9 605 aaPredicted RBP15.02■□□□□ -0
SEC13-208ENST00000397109 LUC7L2Q9Y383 392 aaKnown RBP15.02■□□□□ -0
SEC13-208ENST00000397109 HS3ST4Q9Y661 456 aa15.02■□□□□ -0
SEC13-208ENST00000397109 NUP205Q92621 2012 aa15.02□□□□□ -0.01
SEC13-208ENST00000397109 LRRC53A6NM62 1247 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 CASP14P31944 242 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 RDXP35241 583 aaKnown RBP15.01□□□□□ -0.01
SEC13-208ENST00000397109 CSKP41240 450 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 DHPSP49366 369 aaPredicted RBP15.01□□□□□ -0.01
SEC13-208ENST00000397109 GSCP56915 257 aaPredicted RBP15.01□□□□□ -0.01
SEC13-208ENST00000397109 PUM1Q14671 1186 aaKnown RBP eCLIP15.01□□□□□ -0.01
SEC13-208ENST00000397109 PTPRNQ16849 979 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 FSCBQ5H9T9 825 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 PITRM1Q5JRX3 1037 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 PPP1R2P3Q6NXS1 205 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 CYP2U1Q7Z449 544 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 TMTC1Q8IUR5 882 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 C12orf50Q8NA57 414 aaPredicted RBP15.01□□□□□ -0.01
SEC13-208ENST00000397109 OR2T3Q8NH03 318 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 PRCCQ92733 491 aaPredicted RBP15.01□□□□□ -0.01
SEC13-208ENST00000397109 SIPA1Q96FS4 1042 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 DNAJC7Q99615 494 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 SIK2Q9H0K1 926 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 METTL5Q9NRN9 209 aaKnown RBP15.01□□□□□ -0.01
SEC13-208ENST00000397109 INTS6Q9UL03 887 aaKnown RBP15.01□□□□□ -0.01
SEC13-208ENST00000397109 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 IGHV1OR15-9A0A0B4J2B8 117 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 FAM170AA1A519 330 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 MFAP3LO75121 409 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 CLDN11O75508 207 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 ENDOD1O94919 500 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 SRPRAP08240 638 aaKnown RBP15.01□□□□□ -0.01
SEC13-208ENST00000397109 ACADMP11310 421 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 TFE3P19532 575 aaPredicted RBP15.01□□□□□ -0.01
SEC13-208ENST00000397109 TNFAIP3P21580 790 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 PRKCIP41743 596 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 RPL6Q02878 288 aaKnown RBP15.01□□□□□ -0.01
SEC13-208ENST00000397109 SULT2A1Q06520 285 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 PTP4A2Q12974 167 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 RSPO4Q2I0M5 234 aaPredicted RBP15.01□□□□□ -0.01
SEC13-208ENST00000397109 TSR1Q2NL82 804 aaKnown RBP15.01□□□□□ -0.01
SEC13-208ENST00000397109 PLEKHG6Q3KR16 790 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 C5orf22Q49AR2 442 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 LRRC31Q6UY01 552 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 BNIPLQ7Z465 357 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 IRF2BP2Q7Z5L9 587 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 TMEM139Q8IV31 216 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 TMEFF1Q8IYR6 380 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 RMDN1Q96DB5 314 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 ERLEC1Q96DZ1 483 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 C1orf74Q96LT6 269 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 CFAP57Q96MR6 1250 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms