RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 LRSAM1Q6UWE0 723 aa14.39□□□□□ -0.11
SEC13-204ENST00000397099 FRMD1Q8N878 549 aa14.39□□□□□ -0.11
SEC13-204ENST00000397099 CPA5Q8WXQ8 436 aa14.39□□□□□ -0.11
SEC13-204ENST00000397099 ZNF419Q96HQ0 510 aaPredicted RBP14.39□□□□□ -0.11
SEC13-204ENST00000397099 RPRD1AQ96P16 312 aaPredicted RBP14.39□□□□□ -0.11
SEC13-204ENST00000397099 MKRN2Q9H000 416 aaKnown RBP14.39□□□□□ -0.11
SEC13-204ENST00000397099 HSD3B7Q9H2F3 369 aa14.39□□□□□ -0.11
SEC13-204ENST00000397099 RTN4Q9NQC3 1192 aaKnown RBP14.39□□□□□ -0.11
SEC13-204ENST00000397099 CYP8B1Q9UNU6 501 aa14.39□□□□□ -0.11
SEC13-204ENST00000397099 SYNJ2BP-COX16A0A087WUM0 186 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.38□□□□□ -0.11
SEC13-204ENST00000397099 A0A1W2PQC6 194 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 PAGE1O75459 146 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 DNTTP04053 509 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 GNSP15586 552 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 DESP17661 470 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 RDXP35241 583 aaKnown RBP14.38□□□□□ -0.11
SEC13-204ENST00000397099 CSKP41240 450 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 KLK7P49862 253 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 TPMTP51580 245 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 COPAP53621 1224 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 CDH4P55283 916 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 PITX1P78337 314 aaPredicted RBP14.38□□□□□ -0.11
SEC13-204ENST00000397099 FMO1Q01740 532 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 CENPCQ03188 943 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 ZNF33AQ06730 810 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 ZNF177Q13360 481 aaPredicted RBP14.38□□□□□ -0.11
SEC13-204ENST00000397099 AUHQ13825 339 aaKnown RBP14.38□□□□□ -0.11
SEC13-204ENST00000397099 PTPRNQ16849 979 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 SKOR2Q2VWA4 1001 aaPredicted RBP14.38□□□□□ -0.11
SEC13-204ENST00000397099 HNRNPA1L2Q32P51 320 aaKnown RBP14.38□□□□□ -0.11
SEC13-204ENST00000397099 PLEKHG6Q3KR16 790 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 FBXL22Q6P050 247 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 SLC23A3Q6PIS1 610 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 APTXQ7Z2E3 356 aaKnown RBP14.38□□□□□ -0.11
SEC13-204ENST00000397099 CCAR2Q8N163 923 aaKnown RBP14.38□□□□□ -0.11
SEC13-204ENST00000397099 CFAP52Q8N1V2 620 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 WFDC5Q8TCV5 224 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 CYB5D2Q8WUJ1 264 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 SORCS1Q8WY21 1168 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 CNTNAP3BQ96NU0 1288 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 HAPLN3Q96S86 360 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 CNTNAP3Q9BZ76 1288 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 TKTL2Q9H0I9 626 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 PIGVQ9NUD9 493 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 WSB2Q9NYS7 404 aaPredicted RBP14.38□□□□□ -0.11
SEC13-204ENST00000397099 COX16Q9P0S2 106 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 XPO7Q9UIA9 1087 aaKnown RBP14.38□□□□□ -0.11
SEC13-204ENST00000397099 TMEM59LQ9UK28 342 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 PILRBQ9UKJ0 227 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 ITIH6Q6UXX5 1313 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 NCOR2Q9Y618 2525 aa14.38□□□□□ -0.11
SEC13-204ENST00000397099 EDDM13A0A1B0GTR0 161 aa14.37□□□□□ -0.11
SEC13-204ENST00000397099 LNP1A1A4G5 178 aa14.37□□□□□ -0.11
SEC13-204ENST00000397099 ANKRD62A6NC57 917 aa14.37□□□□□ -0.11
SEC13-204ENST00000397099 C4orf47A7E2U8 309 aa14.37□□□□□ -0.11
SEC13-204ENST00000397099 PATE3B3GLJ2 98 aa14.37□□□□□ -0.11
SEC13-204ENST00000397099 EPHB6O15197 1021 aa14.37□□□□□ -0.11
SEC13-204ENST00000397099 ENDOD1O94919 500 aa14.37□□□□□ -0.11
SEC13-204ENST00000397099 UNGP13051 313 aaPredicted RBP14.37□□□□□ -0.11
SEC13-204ENST00000397099 SDC4P31431 198 aa14.37□□□□□ -0.11
SEC13-204ENST00000397099 PTGER3P43115 390 aa14.37□□□□□ -0.11
SEC13-204ENST00000397099 ARL13BQ3SXY8 428 aa14.37□□□□□ -0.11
SEC13-204ENST00000397099 DAB2IPQ5VWQ8 1189 aa14.37□□□□□ -0.11
SEC13-204ENST00000397099 ZNF776Q68DI1 518 aaPredicted RBP14.37□□□□□ -0.11
SEC13-204ENST00000397099 BNIPLQ7Z465 357 aa14.37□□□□□ -0.11
SEC13-204ENST00000397099 SETD3Q86TU7 594 aaPredicted RBP14.37□□□□□ -0.11
SEC13-204ENST00000397099 PHF13Q86YI8 300 aaPredicted RBP14.37□□□□□ -0.11
SEC13-204ENST00000397099 DHX40Q8IX18 779 aaKnown RBP14.37□□□□□ -0.11
SEC13-204ENST00000397099 DEFB119Q8N690 84 aa14.37□□□□□ -0.11
SEC13-204ENST00000397099 SLC20A1Q8WUM9 679 aa14.37□□□□□ -0.11
SEC13-204ENST00000397099 EDEM3Q9BZQ6 932 aa14.37□□□□□ -0.11
SEC13-204ENST00000397099 TMEM9BQ9NQ34 198 aa14.37□□□□□ -0.11
SEC13-204ENST00000397099 ADAM22Q9P0K1 906 aa14.37□□□□□ -0.11
SEC13-204ENST00000397099 TPX2Q9ULW0 747 aaKnown RBP14.37□□□□□ -0.11
SEC13-204ENST00000397099 ERVW-1Q9UQF0 538 aa14.37□□□□□ -0.11
SEC13-204ENST00000397099 NCKAP1Q9Y2A7 1128 aa14.37□□□□□ -0.11
SEC13-204ENST00000397099 TBC1D30Q9Y2I9 924 aa14.37□□□□□ -0.11
SEC13-204ENST00000397099 HS3ST4Q9Y661 456 aa14.37□□□□□ -0.11
SEC13-204ENST00000397099 ATXN2Q99700 1313 aaKnown RBP14.37□□□□□ -0.11
SEC13-204ENST00000397099 GON4LQ3T8J9 2241 aa14.37□□□□□ -0.11
SEC13-204ENST00000397099 GOLGA8SH3BPF8 625 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 CFIP05156 583 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 SYPP08247 313 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 SERPINF2P08697 491 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 ATP1A3P13637 1013 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 CHRNB2P17787 502 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 PTPN9P43378 593 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 IRX4P78413 519 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 C1QBPQ07021 282 aaKnown RBP14.36□□□□□ -0.11
SEC13-204ENST00000397099 CLEC16AQ2KHT3 1053 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 TRIM61Q5EBN2 209 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 FSCBQ5H9T9 825 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 C6orf118Q5T5N4 469 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 ZNF783Q6ZMS7 281 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 MMS22LQ6ZRQ5 1243 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 USP30Q70CQ3 517 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 STRADAQ7RTN6 431 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 IQCDQ96DY2 449 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 TOE1Q96GM8 510 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms