RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 ARHGEF37A1IGU5 675 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 MICAL2O94851 1124 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 GPD1P21695 349 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 SERPINB9P50453 376 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 NAA20P61599 178 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 ADGRE1Q14246 886 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 SLC9A4Q6AI14 798 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 EEPD1Q7L9B9 569 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 SAPCD2Q86UD0 394 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 CLVS1Q8IUQ0 354 aaPredicted RBP10.07□□□□□ -0.8
TRIM39-203ENST00000396547 SPNS2Q8IVW8 549 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 LRRC71Q8N4P6 559 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 UBR7Q8N806 425 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 CCNYQ8ND76 341 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 DIS3LQ8TF46 1054 aaKnown RBP10.07□□□□□ -0.8
TRIM39-203ENST00000396547 SCYL1Q96KG9 808 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 ZNF518BQ9C0D4 1074 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 PNPLA8Q9NP80 782 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 GGA3Q9NZ52 723 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 C6orf203Q9P0P8 240 aaPredicted RBP10.07□□□□□ -0.8
TRIM39-203ENST00000396547 COPG2Q9UBF2 871 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 ZNF70Q9UC06 446 aaPredicted RBP10.07□□□□□ -0.8
TRIM39-203ENST00000396547 FAM159BA6NKW6 160 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 TMX2-CTNND1H3BSU7 103 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 DENRO43583 198 aaKnown RBP10.07□□□□□ -0.8
TRIM39-203ENST00000396547 XPOTO43592 962 aaKnown RBP10.07□□□□□ -0.8
TRIM39-203ENST00000396547 ZNF189O75820 626 aaPredicted RBP10.07□□□□□ -0.8
TRIM39-203ENST00000396547 LTFP02788 710 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 GJB1P08034 283 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 CDH2P19022 906 aaPredicted RBP10.07□□□□□ -0.8
TRIM39-203ENST00000396547 NR1H2P55055 460 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 CLDN10P78369 228 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 IRF9Q00978 393 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 CEACAM7Q14002 265 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 ZNF667Q5HYK9 610 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 IL23RQ5VWK5 629 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 KCNT2Q6UVM3 1135 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 SCUBE3Q8IX30 993 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 GIPC3Q8TF64 312 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 FRMD8P1Q9BZ68 369 aaPredicted RBP10.07□□□□□ -0.8
TRIM39-203ENST00000396547 COQ10BQ9H8M1 238 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 RNF146Q9NTX7 359 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 RSL24D1Q9UHA3 163 aaKnown RBP10.07□□□□□ -0.8
TRIM39-203ENST00000396547 ZNF112Q9UJU3 913 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 CNTN6Q9UQ52 1028 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 PCDHA11Q9Y5I1 949 aa10.07□□□□□ -0.8
TRIM39-203ENST00000396547 FAM155AB1AL88 458 aaPredicted RBP10.06□□□□□ -0.8
TRIM39-203ENST00000396547 RNASEH2AO75792 299 aaKnown RBP10.06□□□□□ -0.8
TRIM39-203ENST00000396547 TNNC2P02585 160 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 THRAP10827 490 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 MX2P20592 715 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 L1CAMP32004 1257 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 STILQ15468 1287 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 TRNP1Q6NT89 227 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 NIPA1Q7RTP0 329 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 SPATA6LQ8N4H0 392 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 CCNYL1Q8N7R7 359 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 C12orf29Q8N999 325 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 LRTOMTQ8WZ04 291 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 LGMNQ99538 433 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 CIB1Q99828 191 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 PAIP1Q9H074 479 aaKnown RBP10.06□□□□□ -0.8
TRIM39-203ENST00000396547 PFDN4Q9NQP4 134 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 EPS15L1Q9UBC2 864 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 STK39Q9UEW8 545 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 BLOC1S6Q9UL45 172 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 CLEC11AQ9Y240 323 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 CEPT1Q9Y6K0 416 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 H0YCG3 227 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 MED7O43513 233 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 TPST1O60507 370 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 STBD1O95210 358 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 MT-CO1P00395 513 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 TFE3P19532 575 aaPredicted RBP10.06□□□□□ -0.8
TRIM39-203ENST00000396547 CCND2P30279 289 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 AVPR1AP37288 418 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 EMP3P54852 163 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 FAM47CQ5HY64 1035 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 NOL9Q5SY16 702 aaKnown RBP10.06□□□□□ -0.8
TRIM39-203ENST00000396547 MAP1SQ66K74 1059 aaPredicted RBP10.06□□□□□ -0.8
TRIM39-203ENST00000396547 SULF1Q8IWU6 871 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 TMEM192Q8IY95 271 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 ATG4CQ96DT6 458 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 SGF29Q96ES7 293 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 KLHL32Q96NJ5 620 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 APOL2Q9BQE5 337 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 RTKNQ9BST9 563 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 SUDS3Q9H7L9 328 aaPredicted RBP10.06□□□□□ -0.8
TRIM39-203ENST00000396547 WDR41Q9HAD4 459 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 SAGE1Q9NXZ1 904 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 DCDC2Q9UHG0 476 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 INO80B-WBP1J3KQ70 363 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 CASQ2O14958 399 aaPredicted RBP10.06□□□□□ -0.8
TRIM39-203ENST00000396547 FAM163BP0C2L3 166 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 ARSAP15289 507 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 PLOD1Q02809 727 aaPredicted RBP10.06□□□□□ -0.8
TRIM39-203ENST00000396547 RALGDSQ12967 914 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 LSM12Q3MHD2 195 aaKnown RBP10.06□□□□□ -0.8
TRIM39-203ENST00000396547 XKR3Q5GH77 459 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 HEATR6Q6AI08 1181 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms