RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 ARHGAP24Q8N264 748 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 PLD6Q8N2A8 252 aaKnown RBP9.53□□□□□ -0.88
NDE1-201ENST00000396354 ACVR1CQ8NER5 493 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 MFSD3Q96ES6 412 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 SNX27Q96L92 541 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 MED10Q9BTT4 135 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 TMEM121BQ9BXQ6 578 aaPredicted RBP9.53□□□□□ -0.88
NDE1-201ENST00000396354 ASB7Q9H672 318 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 XPNPEP3Q9NQH7 507 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 SAR1AQ9NR31 198 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 APPL1Q9UKG1 709 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 SLC39A10Q9ULF5 831 aa9.53□□□□□ -0.88
NDE1-201ENST00000396354 BARX2Q9UMQ3 279 aaPredicted RBP9.53□□□□□ -0.88
NDE1-201ENST00000396354 GNEQ9Y223 722 aaKnown RBP9.53□□□□□ -0.88
NDE1-201ENST00000396354 PRRC2BQ5JSZ5 2229 aaKnown RBP9.52□□□□□ -0.88
NDE1-201ENST00000396354 TREHO43280 583 aa9.52□□□□□ -0.88
NDE1-201ENST00000396354 OR6B1O95007 311 aa9.52□□□□□ -0.88
NDE1-201ENST00000396354 ALDOAP04075 364 aaKnown RBP9.52□□□□□ -0.88
NDE1-201ENST00000396354 CHRNGP07510 517 aa9.52□□□□□ -0.88
NDE1-201ENST00000396354 P4HA1P13674 534 aa9.52□□□□□ -0.88
NDE1-201ENST00000396354 VAV1P15498 845 aa9.52□□□□□ -0.88
NDE1-201ENST00000396354 TSPAN8P19075 237 aa9.52□□□□□ -0.88
NDE1-201ENST00000396354 FGFR3P22607 806 aa9.52□□□□□ -0.88
NDE1-201ENST00000396354 SULT1E1P49888 294 aa9.52□□□□□ -0.88
NDE1-201ENST00000396354 NUDT2P50583 147 aa9.52□□□□□ -0.88
NDE1-201ENST00000396354 PAPOLAP51003 745 aaKnown RBP9.52□□□□□ -0.88
NDE1-201ENST00000396354 PLK1P53350 603 aa9.52□□□□□ -0.88
NDE1-201ENST00000396354 MRPS35P82673 323 aaKnown RBP9.52□□□□□ -0.88
NDE1-201ENST00000396354 PDE1CQ14123 709 aaPredicted RBP9.52□□□□□ -0.88
NDE1-201ENST00000396354 ZBTB6Q15916 424 aa9.52□□□□□ -0.88
NDE1-201ENST00000396354 SPDYAQ5MJ70 313 aa9.52□□□□□ -0.88
NDE1-201ENST00000396354 GSDMBQ8TAX9 411 aa9.52□□□□□ -0.88
NDE1-201ENST00000396354 RNF217Q8TC41 542 aa9.52□□□□□ -0.88
NDE1-201ENST00000396354 KBTBD7Q8WVZ9 684 aa9.52□□□□□ -0.88
NDE1-201ENST00000396354 EXT2Q93063 718 aa9.52□□□□□ -0.88
NDE1-201ENST00000396354 RNF34Q969K3 372 aa9.52□□□□□ -0.88
NDE1-201ENST00000396354 TMA16Q96EY4 203 aaKnown RBP9.52□□□□□ -0.88
NDE1-201ENST00000396354 NUF2Q9BZD4 464 aa9.52□□□□□ -0.88
NDE1-201ENST00000396354 TAGLN3Q9UI15 199 aa9.52□□□□□ -0.88
NDE1-201ENST00000396354 LRCH1Q9Y2L9 728 aa9.52□□□□□ -0.88
NDE1-201ENST00000396354 MYADML2A6NDP7 307 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 CAPN8A6NHC0 703 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 UNCXA6NJT0 531 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 TMEM88BA6NKF7 163 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 RECQL4O94761 1208 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 CTGFP29279 349 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 ARRB2P32121 409 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 GNL1P36915 607 aaPredicted RBP9.52□□□□□ -0.89
NDE1-201ENST00000396354 ARL4AP40617 200 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 GRM5P41594 1212 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 AQP4P55087 323 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 NME5P56597 212 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 AP2B1P63010 937 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 HTRA3P83110 453 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 FOXB2Q5VYV0 432 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 AP1ARQ63HQ0 302 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 IYDQ6PHW0 289 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 OLFML1Q6UWY5 402 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 ANKRD23Q86SG2 305 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 TMPRSS6Q8IU80 811 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 EXOC8Q8IYI6 725 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 ZNF781Q8N8C0 355 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 DNAJB3Q8WWF6 145 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 KCTD15Q96SI1 283 aaPredicted RBP9.52□□□□□ -0.89
NDE1-201ENST00000396354 CYP4F12Q9HCS2 524 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 CLIC5Q9NZA1 410 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 DTLQ9NZJ0 730 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 FNDC3AQ9Y2H6 1198 aaKnown RBP9.52□□□□□ -0.89
NDE1-201ENST00000396354 TLL2Q9Y6L7 1015 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 COL1A2P08123 1366 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 M0QYT0 321 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 TK2O00142 265 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 PPP1R12AO14974 1030 aaPredicted RBP9.52□□□□□ -0.89
NDE1-201ENST00000396354 RNASEH1O60930 286 aaKnown RBP9.52□□□□□ -0.89
NDE1-201ENST00000396354 BPGMP07738 259 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 VDRP11473 427 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 RAG1P15918 1043 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 CCNA1P78396 465 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 MRPS22P82650 360 aaKnown RBP9.52□□□□□ -0.89
NDE1-201ENST00000396354 DSG1Q02413 1049 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 CACNB2Q08289 660 aaPredicted RBP9.52□□□□□ -0.89
NDE1-201ENST00000396354 STILQ15468 1287 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 CERCAMQ5T4B2 595 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 LCLAT1Q6UWP7 414 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 ALKAL1Q6UXT8 129 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 PLEKHH3Q7Z736 793 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 STRA8Q7Z7C7 330 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 ZBTB46Q86UZ6 589 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 ZNF354CQ86Y25 554 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 DEFB106AQ8N104 65 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 HASPINQ8TF76 798 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 ATP2A3Q93084 1043 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 DNAJC1Q96KC8 554 aaKnown RBP9.52□□□□□ -0.89
NDE1-201ENST00000396354 ZNF778Q96MU6 729 aa9.52□□□□□ -0.89
NDE1-201ENST00000396354 EBNA1BP2Q99848 306 aaKnown RBP9.52□□□□□ -0.89
NDE1-201ENST00000396354 XIRP2A4UGR9 3374 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 TMEM233B4DJY2 109 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 C9JVG2 144 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 SIN3BO75182 1162 aa9.51□□□□□ -0.89
NDE1-201ENST00000396354 F2P00734 622 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms