RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 ZNF781Q8N8C0 355 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 C16orf70Q9BSU1 422 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 CCDC28BQ9BUN5 200 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 ELP3Q9H9T3 547 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 RNF19AQ9NV58 838 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 IGSF9Q9P2J2 1179 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 G3V2L1 256 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 DCXO43602 365 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 ZMPSTE24O75844 475 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 SULT1E1P49888 294 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 CDK7P50613 346 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 C9orf57Q5W0N0 161 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 DEFB106AQ8N104 65 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 CRYBG2Q8N1P7 616 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 PRDM12Q9H4Q4 367 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 TXNDC16Q9P2K2 825 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 BPTFQ12830 3046 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 LOC100653049A0A140TA62 436 aa16.08■□□□□ 0.17
HOXA3-202ENST00000396352 H3BNX3 289 aa16.08■□□□□ 0.17
HOXA3-202ENST00000396352 KRT34O76011 436 aa16.08■□□□□ 0.17
HOXA3-202ENST00000396352 PIM1P11309 404 aaPredicted RBP16.08■□□□□ 0.17
HOXA3-202ENST00000396352 GTF2A2P52657 109 aa16.08■□□□□ 0.17
HOXA3-202ENST00000396352 AQP4P55087 323 aa16.08■□□□□ 0.17
HOXA3-202ENST00000396352 POLE2P56282 527 aa16.08■□□□□ 0.17
HOXA3-202ENST00000396352 LAMC2Q13753 1193 aa16.08■□□□□ 0.17
HOXA3-202ENST00000396352 SLC9B1Q4ZJI4 515 aa16.08■□□□□ 0.17
HOXA3-202ENST00000396352 TCHHL1Q5QJ38 904 aaPredicted RBP16.08■□□□□ 0.17
HOXA3-202ENST00000396352 ARMCX2Q7L311 632 aa16.08■□□□□ 0.17
HOXA3-202ENST00000396352 BNIPLQ7Z465 357 aa16.08■□□□□ 0.17
HOXA3-202ENST00000396352 PSTKQ8IV42 348 aaKnown RBP16.08■□□□□ 0.17
HOXA3-202ENST00000396352 FBXW8Q8N3Y1 598 aa16.08■□□□□ 0.17
HOXA3-202ENST00000396352 EFCAB3Q8N7B9 438 aa16.08■□□□□ 0.17
HOXA3-202ENST00000396352 MAPK15Q8TD08 544 aa16.08■□□□□ 0.17
HOXA3-202ENST00000396352 EIF2AQ9BY44 585 aaKnown RBP16.08■□□□□ 0.17
HOXA3-202ENST00000396352 KLHL4Q9C0H6 718 aa16.08■□□□□ 0.17
HOXA3-202ENST00000396352 CDH19Q9H159 772 aa16.08■□□□□ 0.17
HOXA3-202ENST00000396352 MAN1C1Q9NR34 630 aa16.08■□□□□ 0.17
HOXA3-202ENST00000396352 ADAM28Q9UKQ2 775 aa16.08■□□□□ 0.17
HOXA3-202ENST00000396352 HES2Q9Y543 173 aa16.08■□□□□ 0.17
HOXA3-202ENST00000396352 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.08■□□□□ 0.16
HOXA3-202ENST00000396352 MYCNP04198 464 aaPredicted RBP16.08■□□□□ 0.16
HOXA3-202ENST00000396352 COX4I1P13073 169 aa16.08■□□□□ 0.16
HOXA3-202ENST00000396352 YY1P25490 414 aa16.08■□□□□ 0.16
HOXA3-202ENST00000396352 PRDX6P30041 224 aa16.08■□□□□ 0.16
HOXA3-202ENST00000396352 GARSP41250 739 aaKnown RBP16.08■□□□□ 0.16
HOXA3-202ENST00000396352 TBL3Q12788 808 aaKnown RBP16.08■□□□□ 0.16
HOXA3-202ENST00000396352 CUL3Q13618 768 aa16.08■□□□□ 0.16
HOXA3-202ENST00000396352 ZNF618Q5T7W0 954 aa16.08■□□□□ 0.16
HOXA3-202ENST00000396352 TAPT1Q6NXT6 567 aa16.08■□□□□ 0.16
HOXA3-202ENST00000396352 CLEC14AQ86T13 490 aa16.08■□□□□ 0.16
HOXA3-202ENST00000396352 OR52K1Q8NGK4 314 aa16.08■□□□□ 0.16
HOXA3-202ENST00000396352 SLC2A14Q8TDB8 520 aa16.08■□□□□ 0.16
HOXA3-202ENST00000396352 GDPD5Q8WTR4 605 aa16.08■□□□□ 0.16
HOXA3-202ENST00000396352 ATXN7L3BQ96GX2 97 aa16.08■□□□□ 0.16
HOXA3-202ENST00000396352 SNUPNO95149 360 aaKnown RBP16.07■□□□□ 0.16
HOXA3-202ENST00000396352 ZBTB7AO95365 584 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 TKTP29401 623 aaKnown RBP16.07■□□□□ 0.16
HOXA3-202ENST00000396352 ACADSBP45954 432 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 SERPINB8P50452 374 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 LIMK2P53671 638 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 MTTPP55157 894 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 IRF9Q00978 393 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 DPYSQ14117 519 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 PAFAH1B3Q15102 231 aaKnown RBP16.07■□□□□ 0.16
HOXA3-202ENST00000396352 PDK1Q15118 436 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 FSTL4Q6MZW2 842 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 DEFB132Q7Z7B7 95 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 CCNYQ8ND76 341 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 PPTC7Q8NI37 304 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 AGAP2Q99490 1192 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 PRDM16Q9HAZ2 1276 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 SPTLC1O15269 473 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 UQCRBP14927 111 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 CD1EP15812 388 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 NUMBP49757 651 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 RAB27AP51159 221 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 KBTBD6Q86V97 674 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 BEST2Q8NFU1 509 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 NT5C3BQ969T7 300 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 HSFY1Q96LI6 401 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 CDY2AQ9Y6F7 541 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 CDY1Q9Y6F8 540 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 ZCWPW2A0A1B0GU75 182 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 E9PBE3 544 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 CASQ2O14958 399 aaPredicted RBP16.07■□□□□ 0.16
HOXA3-202ENST00000396352 KLHL41O60662 606 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 KLF10Q13118 480 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 ALKAL1Q6UXT8 129 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 STRA8Q7Z7C7 330 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 HIPK4Q8NE63 616 aa16.07■□□□□ 0.16
HOXA3-202ENST00000396352 PPP1R1BQ9UD71 204 aaPredicted RBP16.07■□□□□ 0.16
HOXA3-202ENST00000396352 RAG1P15918 1043 aa16.06■□□□□ 0.16
HOXA3-202ENST00000396352 GNL1P36915 607 aaPredicted RBP16.06■□□□□ 0.16
HOXA3-202ENST00000396352 XIAPP98170 497 aa16.06■□□□□ 0.16
HOXA3-202ENST00000396352 IFRD2Q12894 506 aaPredicted RBP16.06■□□□□ 0.16
HOXA3-202ENST00000396352 DLG2Q15700 870 aa16.06■□□□□ 0.16
HOXA3-202ENST00000396352 TMEM135Q86UB9 458 aa16.06■□□□□ 0.16
HOXA3-202ENST00000396352 ZNF669Q96BR6 464 aaPredicted RBP16.06■□□□□ 0.16
HOXA3-202ENST00000396352 TRIM4Q9C037 500 aa16.06■□□□□ 0.16
HOXA3-202ENST00000396352 CAB39LQ9H9S4 337 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms