RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 RNPEPQ9H4A4 650 aa8.9□□□□□ -0.98
BDNF-204ENST00000395980 ZNF385DQ9H6B1 395 aa8.9□□□□□ -0.98
BDNF-204ENST00000395980 PSAT1Q9Y617 370 aa8.9□□□□□ -0.98
BDNF-204ENST00000395980 SLCO1B7G3V0H7 640 aa8.9□□□□□ -0.99
BDNF-204ENST00000395980 TADA2AO75478 443 aa8.9□□□□□ -0.99
BDNF-204ENST00000395980 MGAT1P26572 445 aa8.9□□□□□ -0.99
BDNF-204ENST00000395980 THOP1P52888 689 aa8.9□□□□□ -0.99
BDNF-204ENST00000395980 TNFAIP2Q03169 654 aa8.9□□□□□ -0.99
BDNF-204ENST00000395980 DCTN2Q13561 401 aaKnown RBP8.9□□□□□ -0.99
BDNF-204ENST00000395980 PKDCCQ504Y2 493 aa8.9□□□□□ -0.99
BDNF-204ENST00000395980 PPP6R3Q5H9R7 873 aaPredicted RBP8.9□□□□□ -0.99
BDNF-204ENST00000395980 EEF1DP3Q658K8 133 aa8.9□□□□□ -0.99
BDNF-204ENST00000395980 ZNF410Q86VK4 478 aa8.9□□□□□ -0.99
BDNF-204ENST00000395980 SNX32Q86XE0 403 aa8.9□□□□□ -0.99
BDNF-204ENST00000395980 DIS3LQ8TF46 1054 aaKnown RBP8.9□□□□□ -0.99
BDNF-204ENST00000395980 SEPT1Q8WYJ6 367 aa8.9□□□□□ -0.99
BDNF-204ENST00000395980 KHSRPQ92945 711 aaKnown RBP eCLIP8.9□□□□□ -0.99
BDNF-204ENST00000395980 C11orf84Q9BUA3 381 aaPredicted RBP8.9□□□□□ -0.99
BDNF-204ENST00000395980 ILKAPQ9H0C8 392 aaPredicted RBP8.9□□□□□ -0.99
BDNF-204ENST00000395980 DTLQ9NZJ0 730 aa8.9□□□□□ -0.99
BDNF-204ENST00000395980 RAP2CQ9Y3L5 183 aa8.9□□□□□ -0.99
BDNF-204ENST00000395980 G3V2L1 256 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 MATN2O00339 956 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 HDAC3O15379 428 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 GRAP2O75791 330 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 ZMPSTE24O75844 475 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 MAP3K6O95382 1288 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 ME2P23368 584 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 NDST1P52848 882 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 PEX6Q13608 980 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 DPYSQ14117 519 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 KYAT1Q16773 422 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 CSPG4P5Q96PW8 444 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 GRIP2Q9C0E4 1043 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 DNAAF2Q9NVR5 837 aaKnown RBP8.89□□□□□ -0.99
BDNF-204ENST00000395980 HACD3Q9P035 362 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 SLC17A6Q9P2U8 582 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 VTI1BQ9UEU0 232 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 GNEQ9Y223 722 aaKnown RBP8.89□□□□□ -0.99
BDNF-204ENST00000395980 COL4A5P29400 1685 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 LACTBL1A8MY62 500 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 ADCY6O43306 1168 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 HNRNPRO43390 633 aaKnown RBP8.89□□□□□ -0.99
BDNF-204ENST00000395980 MCF2P10911 925 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 CDK4P11802 303 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 PPARGP37231 505 aaPredicted RBP8.89□□□□□ -0.99
BDNF-204ENST00000395980 MRPS22P82650 360 aaKnown RBP8.89□□□□□ -0.99
BDNF-204ENST00000395980 USP4Q13107 963 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 GOLGA7BQ2TAP0 167 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 PPM1JQ5JR12 505 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 MAP1SQ66K74 1059 aaPredicted RBP8.89□□□□□ -0.99
BDNF-204ENST00000395980 NCBP2-AS2Q69YL0 99 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 NUP93Q8N1F7 819 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 LRRC43Q8N309 656 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 DCLK2Q8N568 766 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 EFCAB3Q8N7B9 438 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 CNTD1Q8N815 330 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 COLGALT1Q8NBJ5 622 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 CHST13Q8NET6 341 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 MAPK15Q8TD08 544 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 HPDLQ96IR7 371 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 NFKBIZQ9BYH8 718 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 MRPL40Q9NQ50 206 aaKnown RBP8.89□□□□□ -0.99
BDNF-204ENST00000395980 AP4E1Q9UPM8 1137 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 SQORQ9Y6N5 450 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 GOLGA8QA0A0J9YX86 632 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.89□□□□□ -0.99
BDNF-204ENST00000395980 GOLGA8OA6NCC3 632 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 GOLGA8NF8WBI6 632 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 AIM2O14862 343 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 XRCC1P18887 633 aaPredicted RBP8.89□□□□□ -0.99
BDNF-204ENST00000395980 HADHAP40939 763 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 GLUD2P49448 558 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 CSE1LP55060 971 aaKnown RBP8.89□□□□□ -0.99
BDNF-204ENST00000395980 OSTNP61366 133 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 JADE1Q6IE81 842 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 KLHL23Q8NBE8 558 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 ZNF280CQ8ND82 737 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 PDCD6IPQ8WUM4 868 aaKnown RBP8.89□□□□□ -0.99
BDNF-204ENST00000395980 GAB3Q8WWW8 586 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 OR52B2Q96RD2 323 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 CDRT15Q96T59 188 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 DHX35Q9H5Z1 703 aaKnown RBP8.89□□□□□ -0.99
BDNF-204ENST00000395980 MRGBPQ9NV56 204 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 IGSF9Q9P2J2 1179 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 USP3Q9Y6I4 520 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 CCDC160A6NGH7 325 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 IRF6O14896 467 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 TGFB3P10600 412 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 DNAJB1P25685 340 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 SESN2P58004 480 aaPredicted RBP8.89□□□□□ -0.99
BDNF-204ENST00000395980 TXNL4AP83876 142 aaKnown RBP8.89□□□□□ -0.99
BDNF-204ENST00000395980 FAM187BQ17R55 369 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 METTL7BQ6UX53 244 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 NT5DC4Q86YG4 428 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 PSTKQ8IV42 348 aaKnown RBP8.89□□□□□ -0.99
BDNF-204ENST00000395980 TOP1MTQ969P6 601 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 CNBD2Q96M20 576 aa8.89□□□□□ -0.99
BDNF-204ENST00000395980 KCTD15Q96SI1 283 aaPredicted RBP8.89□□□□□ -0.99
BDNF-204ENST00000395980 PRPF18Q99633 342 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms