RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 OR6C75A6NL08 312 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 ERI2A8K979 691 aaKnown RBP5.51□□□□□ -1.53
VPS41-203ENST00000395969 C2CD2LO14523 706 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 DCLK1O15075 740 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 MTSS1O43312 755 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 SPOPO43791 374 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 SIN3BO75182 1162 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 THP07101 528 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 PTPN1P18031 435 aaKnown RBP5.51□□□□□ -1.53
VPS41-203ENST00000395969 CRABP2P29373 138 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 GNL1P36915 607 aaPredicted RBP5.51□□□□□ -1.53
VPS41-203ENST00000395969 PHEXP78562 749 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 PRKCZQ05513 592 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 SEMA5AQ13591 1074 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 HNRNPDQ14103 355 aaKnown RBP5.51□□□□□ -1.53
VPS41-203ENST00000395969 GRM2Q14416 872 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 PPP2R5DQ14738 602 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 KCNA10Q16322 511 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 CRTC2Q53ET0 693 aaPredicted RBP5.51□□□□□ -1.53
VPS41-203ENST00000395969 TAF1BQ53T94 588 aaPredicted RBP5.51□□□□□ -1.53
VPS41-203ENST00000395969 PMF1Q6P1K2 205 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 SLC24A5Q71RS6 500 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 OSTM1Q86WC4 334 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 ADGRF2Q8IZF7 708 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 PPFIBP2Q8ND30 876 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 MZB1Q8WU39 189 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 WNT8BQ93098 351 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 HIC2Q96JB3 615 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 PEBP4Q96S96 227 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 VAT1Q99536 393 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 BTBD10Q9BSF8 475 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 WDR6Q9NNW5 1121 aaKnown RBP5.51□□□□□ -1.53
VPS41-203ENST00000395969 WDR37Q9Y2I8 494 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 ZNF711Q9Y462 761 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 NUMBLQ9Y6R0 609 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 TTC3P53804 2025 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 ANAPC1Q9H1A4 1944 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 A0A0J9YVX5 310 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 A8MXQ7 604 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 FOXO6A8MYZ6 492 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 GFRA2O00451 464 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 GSC2O15499 205 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 HNRNPRO43390 633 aaKnown RBP5.51□□□□□ -1.53
VPS41-203ENST00000395969 CCDC22O60826 627 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 FYNP06241 537 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 ASGR1P07306 291 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 HNRNPCP07910 306 aaKnown RBP eCLIP5.51□□□□□ -1.53
VPS41-203ENST00000395969 RALAP11233 206 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 ODC1P11926 461 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 CKBP12277 381 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 ABCB4P21439 1286 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 MIPP30301 263 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 CCNFP41002 786 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 NEK3P51956 506 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 PSMC1P62191 440 aaKnown RBP5.51□□□□□ -1.53
VPS41-203ENST00000395969 HPCAP84074 193 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 RING1Q06587 406 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 DNAJC3Q13217 504 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 TMED1Q13445 227 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 ITGA7Q13683 1181 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 KIZQ2M2Z5 673 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 GOLGA7BQ2TAP0 167 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 KIAA0319Q5VV43 1072 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 CLEC20AQ6ZU45 233 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 SH2D5Q6ZV89 423 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 CLNKQ7Z7G1 428 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 MAP7D3Q8IWC1 876 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 ZBTB8BQ8NAP8 495 aaPredicted RBP5.51□□□□□ -1.53
VPS41-203ENST00000395969 SMYD1Q8NB12 490 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 LINC01599Q8WXQ3 324 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 ARMC5Q96C12 935 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 SMARCD1Q96GM5 515 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 OSMRQ99650 979 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 C11orf70Q9BRQ4 267 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 B3GNT5Q9BYG0 378 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 RHOBTB2Q9BYZ6 727 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 KLC2Q9H0B6 622 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 SMOC2Q9H3U7 446 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 ACP6Q9NPH0 428 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 NKIRAS1Q9NYS0 192 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 CLIC5Q9NZA1 410 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 IGSF9Q9P2J2 1179 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 DNAJB4Q9UDY4 337 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 RIMKLBQ9ULI2 386 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 SCML2Q9UQR0 700 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 DENND4AQ7Z401 1863 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 KIAA1549LQ6ZVL6 1849 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 ATG2AQ2TAZ0 1938 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 TCRBV7S2A1N4TA0A589 114 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 KCNU1A8MYU2 1149 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 SCAMP3O14828 347 aaKnown RBP5.51□□□□□ -1.53
VPS41-203ENST00000395969 EFCAB14O75071 495 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 MYL3P08590 195 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 UBTFL6P0CB48 400 aaPredicted RBP5.51□□□□□ -1.53
VPS41-203ENST00000395969 ZCCHC18P0CG32 403 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 VAV1P15498 845 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 PRKCHP24723 683 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 WEE1P30291 646 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 MAGEA12P43365 314 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 POLD2P49005 469 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms