RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 CNTN5O94779 1100 aa20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 PAPLNO95428 1278 aa20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 MX2P20592 715 aa20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 ADCY8P40145 1251 aa20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 RPL21P46778 160 aaKnown RBP20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 DRG2P55039 364 aaKnown RBP20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 HLTFQ14527 1009 aaKnown RBP eCLIP20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 LRIT3Q3SXY7 679 aa20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 ALFQ53S48 1182 aa20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 RARS2Q5T160 578 aaKnown RBP20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 HEATR6Q6AI08 1181 aaKnown RBP20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 FBXO38Q6PIJ6 1188 aa20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 TFAP2DQ7Z6R9 452 aa20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 NLRP14Q86W24 1093 aa20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 TP53INP2Q8IXH6 220 aa20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 EFHBQ8N7U6 833 aa20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 CELF6Q96J87 481 aaKnown RBP20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 LGMNQ99538 433 aa20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 KLC2Q9H0B6 622 aa20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 PRDM12Q9H4Q4 367 aa20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 PCDH9Q9HC56 1237 aa20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 TMEM248Q9NWD8 314 aa20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 CFAP97Q9P2B7 532 aa20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 ZMYM5Q9UJ78 669 aa20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 ARHGAP26Q9UNA1 814 aa20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 LAMA3Q16787 3333 aa20.99■□□□□ 0.95
VCPKMT-202ENST00000395860 ZSCAN5DPP0CG00 497 aa20.98■□□□□ 0.95
VCPKMT-202ENST00000395860 H2AFXP16104 143 aaPredicted RBP20.98■□□□□ 0.95
VCPKMT-202ENST00000395860 AP1B1Q10567 949 aa20.98■□□□□ 0.95
VCPKMT-202ENST00000395860 C5orf22Q49AR2 442 aa20.98■□□□□ 0.95
VCPKMT-202ENST00000395860 RABGAP1LQ5R372 815 aa20.98■□□□□ 0.95
VCPKMT-202ENST00000395860 TMEM184AQ6ZMB5 413 aa20.98■□□□□ 0.95
VCPKMT-202ENST00000395860 GSPT2Q8IYD1 628 aaKnown RBP20.98■□□□□ 0.95
VCPKMT-202ENST00000395860 MYEOVQ96EZ4 313 aa20.98■□□□□ 0.95
VCPKMT-202ENST00000395860 FERMT1Q9BQL6 677 aa20.98■□□□□ 0.95
VCPKMT-202ENST00000395860 SMG9Q9H0W8 520 aaKnown RBP20.98■□□□□ 0.95
VCPKMT-202ENST00000395860 USP29Q9HBJ7 922 aa20.98■□□□□ 0.95
VCPKMT-202ENST00000395860 NDFIP2Q9NV92 336 aa20.98■□□□□ 0.95
VCPKMT-202ENST00000395860 STOML2Q9UJZ1 356 aa20.98■□□□□ 0.95
VCPKMT-202ENST00000395860 NFU1Q9UMS0 254 aa20.98■□□□□ 0.95
VCPKMT-202ENST00000395860 NYNRINQ9P2P1 1898 aaKnown RBP20.98■□□□□ 0.95
VCPKMT-202ENST00000395860 A0A1W2PPC1 479 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 LEFTY2O00292 366 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 SCAMP3O14828 347 aaKnown RBP20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 LINC01565O15544 149 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 GLP2RO95838 553 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 MYBL2P10244 700 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 CEBPBP17676 345 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 ACTN2P35609 894 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 GALNT2Q10471 571 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 PRKD1Q15139 912 aaPredicted RBP20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 Q6ZNB5 142 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 ING5Q8WYH8 240 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 SNF8Q96H20 258 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 ZNF510Q9Y2H8 683 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 ZFP37Q9Y6Q3 630 aaPredicted RBP20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 NUP210Q8TEM1 1887 aaPredicted RBP20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 DFFAO00273 331 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 TRDMT1O14717 391 aaKnown RBP20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 GREM1O60565 184 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 GARSP41250 739 aaKnown RBP20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 CALCOCO2Q13137 446 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 MAP9Q49MG5 647 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 HTR3DQ70Z44 454 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 CIR1Q86X95 450 aaPredicted RBP20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 CFAP52Q8N1V2 620 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 HTR3CQ8WXA8 447 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 HDAC11Q96DB2 347 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 APOL5Q9BWW9 433 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 BRD8Q9H0E9 1235 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 LMCD1Q9NZU5 365 aa20.97■□□□□ 0.95
VCPKMT-202ENST00000395860 VAV1P15498 845 aa20.96■□□□□ 0.95
VCPKMT-202ENST00000395860 MLLT1Q03111 559 aaPredicted RBP20.96■□□□□ 0.95
VCPKMT-202ENST00000395860 PPIDQ08752 370 aaKnown RBP20.96■□□□□ 0.95
VCPKMT-202ENST00000395860 GPS1Q13098 491 aa20.96■□□□□ 0.95
VCPKMT-202ENST00000395860 ANKRD54Q6NXT1 300 aa20.96■□□□□ 0.95
VCPKMT-202ENST00000395860 ARHGAP12Q8IWW6 846 aa20.96■□□□□ 0.95
VCPKMT-202ENST00000395860 EIF1ADQ8N9N8 165 aaKnown RBP20.96■□□□□ 0.95
VCPKMT-202ENST00000395860 ITFG1Q8TB96 612 aa20.96■□□□□ 0.95
VCPKMT-202ENST00000395860 SH3RF2Q8TEC5 729 aa20.96■□□□□ 0.95
VCPKMT-202ENST00000395860 RTP4Q96DX8 246 aa20.96■□□□□ 0.95
VCPKMT-202ENST00000395860 PRICKLE1Q96MT3 831 aaPredicted RBP20.96■□□□□ 0.95
VCPKMT-202ENST00000395860 SLC39A8Q9C0K1 460 aa20.96■□□□□ 0.95
VCPKMT-202ENST00000395860 TDP1Q9NUW8 608 aa20.96■□□□□ 0.95
VCPKMT-202ENST00000395860 CCL26Q9Y258 94 aa20.96■□□□□ 0.95
VCPKMT-202ENST00000395860 TSPAN3O60637 253 aa20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 ZNF189O75820 626 aaPredicted RBP20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 IVDP26440 423 aa20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 OR1E1P30953 314 aa20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 MAPKAPK2P49137 400 aa20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 CLCN6P51797 869 aa20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 NDST2P52849 883 aa20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 NRLP54845 237 aa20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 P3H1Q32P28 736 aa20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 UMODL1-AS1Q8N2C9 162 aa20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 BBOF1Q8ND07 529 aa20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 USP13Q92995 863 aaPredicted RBP20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 LRRC45Q96CN5 670 aa20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 RETREG1Q9H6L5 497 aa20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 GRHL1Q9NZI5 618 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms