RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 ZNF776Q68DI1 518 aaPredicted RBP14.19□□□□□ -0.14
CXCL12-205ENST00000395794 MMS22LQ6ZRQ5 1243 aa14.19□□□□□ -0.14
CXCL12-205ENST00000395794 NOP9Q86U38 636 aaKnown RBP14.19□□□□□ -0.14
CXCL12-205ENST00000395794 CCAR2Q8N163 923 aaKnown RBP14.19□□□□□ -0.14
CXCL12-205ENST00000395794 NEK11Q8NG66 645 aa14.19□□□□□ -0.14
CXCL12-205ENST00000395794 LMLNQ96KR4 655 aa14.19□□□□□ -0.14
CXCL12-205ENST00000395794 MIR1-1HGQ9H1L0 117 aa14.19□□□□□ -0.14
CXCL12-205ENST00000395794 PCED1AQ9H1Q7 454 aa14.19□□□□□ -0.14
CXCL12-205ENST00000395794 WDCPQ9H6R7 721 aa14.19□□□□□ -0.14
CXCL12-205ENST00000395794 SCML1Q9UN30 329 aa14.19□□□□□ -0.14
CXCL12-205ENST00000395794 ERVW-1Q9UQF0 538 aa14.19□□□□□ -0.14
CXCL12-205ENST00000395794 ABCA7Q8IZY2 2146 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.18□□□□□ -0.14
CXCL12-205ENST00000395794 GOLGA8SH3BPF8 625 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 CDX4O14627 284 aaPredicted RBP14.18□□□□□ -0.14
CXCL12-205ENST00000395794 KCNK5O95279 499 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 MMEP08473 750 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 SOX5P35711 763 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 STAT1P42224 750 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 COPB1P53618 953 aaKnown RBP14.18□□□□□ -0.14
CXCL12-205ENST00000395794 RPS14P62263 151 aaKnown RBP14.18□□□□□ -0.14
CXCL12-205ENST00000395794 UBXN1Q04323 297 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 DEUP1Q05D60 604 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 ZNF177Q13360 481 aaPredicted RBP14.18□□□□□ -0.14
CXCL12-205ENST00000395794 AUHQ13825 339 aaKnown RBP14.18□□□□□ -0.14
CXCL12-205ENST00000395794 SYCP1Q15431 976 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 HNRNPA1L2Q32P51 320 aaKnown RBP14.18□□□□□ -0.14
CXCL12-205ENST00000395794 BRMS1LQ5PSV4 323 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 ACBD5Q5T8D3 534 aaPredicted RBP14.18□□□□□ -0.14
CXCL12-205ENST00000395794 DCAF12L1Q5VU92 463 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 NAA35Q5VZE5 725 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 PSAPL1Q6NUJ1 521 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 FBXL22Q6P050 247 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 LRRC31Q6UY01 552 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 EPS8L1Q8TE68 723 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 CPA5Q8WXQ8 436 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 NPY6RQ99463 290 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 PRMT1Q99873 361 aaKnown RBP14.18□□□□□ -0.14
CXCL12-205ENST00000395794 BTBD1Q9H0C5 482 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 SIK2Q9H0K1 926 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 GANQ9H2C0 597 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 SLC32A1Q9H598 525 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 NLRC4Q9NPP4 1024 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 LIMA1Q9UHB6 759 aaKnown RBP14.18□□□□□ -0.14
CXCL12-205ENST00000395794 INTS6Q9UL03 887 aaKnown RBP14.18□□□□□ -0.14
CXCL12-205ENST00000395794 VANGL2Q9ULK5 521 aa14.18□□□□□ -0.14
CXCL12-205ENST00000395794 MYO18AQ92614 2054 aaKnown RBP14.18□□□□□ -0.14
CXCL12-205ENST00000395794 EDDM13A0A1B0GTR0 161 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 A0A1B0GTW7 788 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 TARSL2A2RTX5 802 aaKnown RBP14.17□□□□□ -0.14
CXCL12-205ENST00000395794 LGALS16A8MUM7 142 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 METTL12A8MUP2 240 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 ARHGAP33O14559 1287 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 OPHN1O60890 802 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 SIN3BO75182 1162 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 PAGE1O75459 146 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 CLDN11O75508 207 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 PDGFRAP16234 1089 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 ZNF18P17022 549 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 MAOBP27338 520 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 CXCR3P49682 368 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 KLK7P49862 253 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 CDR2Q01850 454 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 ARID5BQ14865 1188 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 SLC25A52Q3SY17 297 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 SH3PXD2AQ5TCZ1 1133 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 TRIM72Q6ZMU5 477 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 CIR1Q86X95 450 aaPredicted RBP14.17□□□□□ -0.14
CXCL12-205ENST00000395794 XYLT1Q86Y38 959 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 DHX40Q8IX18 779 aaKnown RBP14.17□□□□□ -0.14
CXCL12-205ENST00000395794 APCDD1Q8J025 514 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 DNASE2BQ8WZ79 361 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 SNX19Q92543 992 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 ZDHHC5Q9C0B5 715 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 TKTL2Q9H0I9 626 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 RSPH9Q9H1X1 276 aaPredicted RBP14.17□□□□□ -0.14
CXCL12-205ENST00000395794 SGK2Q9HBY8 427 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 CAPN10Q9HC96 672 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 PIGVQ9NUD9 493 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 HS3ST4Q9Y661 456 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 PLXND1Q9Y4D7 1925 aa14.17□□□□□ -0.14
CXCL12-205ENST00000395794 FAM170AA1A519 330 aa14.16□□□□□ -0.14
CXCL12-205ENST00000395794 TTC34A8MYJ7 566 aa14.16□□□□□ -0.14
CXCL12-205ENST00000395794 SEMA4FO95754 770 aa14.16□□□□□ -0.14
CXCL12-205ENST00000395794 CEACAM1P13688 526 aa14.16□□□□□ -0.14
CXCL12-205ENST00000395794 CSRP1P21291 193 aaKnown RBP14.16□□□□□ -0.14
CXCL12-205ENST00000395794 CTSOP43234 321 aaPredicted RBP14.16□□□□□ -0.14
CXCL12-205ENST00000395794 PLK1P53350 603 aa14.16□□□□□ -0.14
CXCL12-205ENST00000395794 NOMO3P69849 1222 aa14.16□□□□□ -0.14
CXCL12-205ENST00000395794 TYRO3Q06418 890 aa14.16□□□□□ -0.14
CXCL12-205ENST00000395794 N4BP2L1Q5TBK1 243 aaPredicted RBP14.16□□□□□ -0.14
CXCL12-205ENST00000395794 ZCCHC9Q8N567 271 aaKnown RBP14.16□□□□□ -0.14
CXCL12-205ENST00000395794 MINDY1Q8N5J2 469 aa14.16□□□□□ -0.14
CXCL12-205ENST00000395794 SLC20A1Q8WUM9 679 aa14.16□□□□□ -0.14
CXCL12-205ENST00000395794 PGAP3Q96FM1 320 aaPredicted RBP14.16□□□□□ -0.14
CXCL12-205ENST00000395794 RPL10LQ96L21 214 aaKnown RBP14.16□□□□□ -0.14
CXCL12-205ENST00000395794 MRGPRX3Q96LB0 322 aa14.16□□□□□ -0.14
CXCL12-205ENST00000395794 OMDQ99983 421 aa14.16□□□□□ -0.14
CXCL12-205ENST00000395794 MTG2Q9H4K7 406 aa14.16□□□□□ -0.14
CXCL12-205ENST00000395794 FSCN3Q9NQT6 498 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms