RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 SORCS1Q8WY21 1168 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 ALG14Q96F25 216 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 MYO19Q96H55 970 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 LOXL4Q96JB6 756 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 CIPCQ9C0C6 399 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 KIAA1522Q9P206 1035 aaPredicted RBP13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 VANGL2Q9ULK5 521 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 LUC7L2Q9Y383 392 aaKnown RBP13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 PRR5-ARHGAP8B1AHC4 643 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 RTN2O75298 545 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 ASLP04424 464 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 ATP5BP06576 529 aaKnown RBP13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 SKILP12757 684 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 POLR2EP19388 210 aaKnown RBP13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 GPD1P21695 349 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 PRKCHP24723 683 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 HNRNPH3P31942 346 aaKnown RBP13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 P2RY2P41231 377 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 CSKP41240 450 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 IRAK1P51617 712 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 OXCT1P55809 520 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 ARHGAP8P85298 464 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 ATP11AP98196 1134 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 CAMK2GQ13555 558 aaPredicted RBP13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 STARD3Q14849 445 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 ARID5BQ14865 1188 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 C15orf59Q2T9L4 293 aaPredicted RBP13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 MAP7D1Q3KQU3 841 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 PLEKHG6Q3KR16 790 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 PLK5Q496M5 336 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 RAB6CQ53S08 254 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 PITRM1Q5JRX3 1037 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 DNAJC24Q6P3W2 148 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 PRR23BQ6ZRT6 265 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 CEP68Q76N32 757 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 METTL3Q86U44 580 aaKnown RBP13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 KBTBD6Q86V97 674 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 CCDC117Q8IWD4 279 aaPredicted RBP13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 FAM160A2Q8N612 972 aaPredicted RBP13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 RPRD1AQ96P16 312 aaPredicted RBP13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 TPSD1Q9BZJ3 242 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 RAB6CQ9H0N0 254 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 ISCUQ9H1K1 167 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 DUSP15Q9H1R2 295 aaPredicted RBP13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 RAB23Q9ULC3 237 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 USP18Q9UMW8 372 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 TBC1D30Q9Y2I9 924 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 RAD54BQ9Y620 910 aa13.77□□□□□ -0.21
HLA-DMA-202ENST00000395303 DOCK9Q9BZ29 2069 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 H0Y626 953 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 LRP3O75074 770 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 CLDN11O75508 207 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 MOCS3O95396 460 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 SERPING1P05155 500 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 RETP07949 1114 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 SRPRAP08240 638 aaKnown RBP13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 NDUFV2P19404 249 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 SDHBP21912 280 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 RRM1P23921 792 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 ADRA1BP35368 520 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 GGCXP38435 758 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 VASPP50552 380 aaPredicted RBP13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 ZNF143P52747 638 aaPredicted RBP13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 CDH4P55283 916 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 HDAC4P56524 1084 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 RPL7AP62424 266 aaKnown RBP13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 SCAPQ12770 1279 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 BYSLQ13895 437 aaKnown RBP13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 TRIM14Q14142 442 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 LPAL2Q16609 132 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 SH3PXD2AQ5TCZ1 1133 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 MANEALQ5VSG8 457 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 CIR1Q86X95 450 aaPredicted RBP13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 FAM131BQ86XD5 332 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 DRC7Q8IY82 874 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 FAM172AQ8WUF8 416 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 CYB5D2Q8WUJ1 264 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 HMGB4Q8WW32 186 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 NTAN1Q96AB6 310 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 MRGPRX3Q96LB0 322 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 MRGPRX1Q96LB2 322 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 SIK2Q9H0K1 926 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 OSBPL2Q9H1P3 480 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 TMPRSS4Q9NRS4 437 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 PPARGC1AQ9UBK2 798 aaKnown RBP13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 ZNF212Q9UDV6 495 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 GMEB2Q9UKD1 530 aa13.76□□□□□ -0.21
HLA-DMA-202ENST00000395303 ZNF217O75362 1048 aa13.75□□□□□ -0.21
HLA-DMA-202ENST00000395303 EPN2O95208 641 aa13.75□□□□□ -0.21
HLA-DMA-202ENST00000395303 FTLP02792 175 aaPredicted RBP13.75□□□□□ -0.21
HLA-DMA-202ENST00000395303 BCKDHBP21953 392 aa13.75□□□□□ -0.21
HLA-DMA-202ENST00000395303 CASP14P31944 242 aa13.75□□□□□ -0.21
HLA-DMA-202ENST00000395303 COPAP53621 1224 aa13.75□□□□□ -0.21
HLA-DMA-202ENST00000395303 MAMLD1Q13495 774 aa13.75□□□□□ -0.21
HLA-DMA-202ENST00000395303 CDO1Q16878 200 aa13.75□□□□□ -0.21
HLA-DMA-202ENST00000395303 FNDC3BQ53EP0 1204 aaKnown RBP13.75□□□□□ -0.21
HLA-DMA-202ENST00000395303 TDRD12Q587J7 1177 aaKnown RBP13.75□□□□□ -0.21
HLA-DMA-202ENST00000395303 PMS2CLQ68D20 193 aa13.75□□□□□ -0.21
HLA-DMA-202ENST00000395303 SPECC1LQ69YQ0 1117 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms